RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 ZNF644Q9H582 1327 aaPredicted RBP24.74■■□□□ 1.55
FOXA3-202ENST00000594297 FAM135AQ9P2D6 1515 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 PZPP20742 1482 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 SHANK2Q9UPX8 1470 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 RTEL1-TNFRSF6BF6WH68 1400 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 TNRQ92752 1358 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
FOXA3-202ENST00000594297 HSPA1LP34931 641 aa24.72■■□□□ 1.55
FOXA3-202ENST00000594297 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
FOXA3-202ENST00000594297 DHX29Q7Z478 1369 aaKnown RBP24.69■■□□□ 1.54
FOXA3-202ENST00000594297 PIP4K2BP78356 416 aa24.69■■□□□ 1.54
FOXA3-202ENST00000594297 ALKQ9UM73 1620 aa24.68■■□□□ 1.54
FOXA3-202ENST00000594297 FBXO31Q5XUX0 539 aaPredicted RBP24.66■■□□□ 1.54
FOXA3-202ENST00000594297 CCDC141Q6ZP82 1450 aa24.65■■□□□ 1.54
FOXA3-202ENST00000594297 DEPDC5O75140 1603 aa24.65■■□□□ 1.54
FOXA3-202ENST00000594297 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
FOXA3-202ENST00000594297 TOM1O60784 492 aa24.63■■□□□ 1.53
FOXA3-202ENST00000594297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.63■■□□□ 1.53
FOXA3-202ENST00000594297 CAMSAP2Q08AD1 1489 aa24.63■■□□□ 1.53
FOXA3-202ENST00000594297 UGGT1Q9NYU2 1555 aa24.63■■□□□ 1.53
FOXA3-202ENST00000594297 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
FOXA3-202ENST00000594297 NLRP1Q9C000 1473 aa24.62■■□□□ 1.53
FOXA3-202ENST00000594297 KIF3BO15066 747 aa24.61■■□□□ 1.53
FOXA3-202ENST00000594297 STRCP1A6NGW2 1772 aa24.6■■□□□ 1.53
FOXA3-202ENST00000594297 MED14O60244 1454 aa24.6■■□□□ 1.53
FOXA3-202ENST00000594297 NPHP4O75161 1426 aaPredicted RBP24.6■■□□□ 1.53
FOXA3-202ENST00000594297 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
FOXA3-202ENST00000594297 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
FOXA3-202ENST00000594297 SYNMO15061 1565 aa24.57■■□□□ 1.52
FOXA3-202ENST00000594297 ANKLE2Q86XL3 938 aa24.56■■□□□ 1.52
FOXA3-202ENST00000594297 ARHGEF5Q12774 1597 aa24.55■■□□□ 1.52
FOXA3-202ENST00000594297 NCOA2Q15596 1464 aa24.55■■□□□ 1.52
FOXA3-202ENST00000594297 ZC3H13Q5T200 1668 aaKnown RBP24.55■■□□□ 1.52
FOXA3-202ENST00000594297 WASHC2CQ9Y4E1 1318 aa24.55■■□□□ 1.52
FOXA3-202ENST00000594297 THEMISQ8N1K5 641 aaPredicted RBP24.52■■□□□ 1.52
FOXA3-202ENST00000594297 ABCC3O15438 1527 aa24.51■■□□□ 1.51
FOXA3-202ENST00000594297 LRRC7Q96NW7 1537 aa24.51■■□□□ 1.51
FOXA3-202ENST00000594297 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
FOXA3-202ENST00000594297 MROH1Q8NDA8 1641 aa24.47■■□□□ 1.51
FOXA3-202ENST00000594297 CEP152O94986 1710 aa24.47■■□□□ 1.51
FOXA3-202ENST00000594297 UBR1Q8IWV7 1749 aa24.47■■□□□ 1.51
FOXA3-202ENST00000594297 EIF2AK4Q9P2K8 1649 aaKnown RBP24.46■■□□□ 1.51
FOXA3-202ENST00000594297 ERVK-7P63135 1459 aa24.46■■□□□ 1.51
FOXA3-202ENST00000594297 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
FOXA3-202ENST00000594297 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
FOXA3-202ENST00000594297 RSPH4AQ5TD94 716 aa24.42■■□□□ 1.5
FOXA3-202ENST00000594297 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
FOXA3-202ENST00000594297 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
FOXA3-202ENST00000594297 SCAF11Q99590 1463 aaKnown RBP24.38■■□□□ 1.49
FOXA3-202ENST00000594297 TSPY4P0CV99 314 aa24.35■■□□□ 1.49
FOXA3-202ENST00000594297 TSPY10P0CW01 314 aa24.35■■□□□ 1.49
FOXA3-202ENST00000594297 CFAP65Q6ZU64 1925 aaKnown RBP24.34■■□□□ 1.49
FOXA3-202ENST00000594297 SLIT1O75093 1534 aa24.34■■□□□ 1.49
FOXA3-202ENST00000594297 ARHGAP23Q9P227 1491 aa24.33■■□□□ 1.49
FOXA3-202ENST00000594297 PRDM15P57071 1507 aaPredicted RBP24.3■■□□□ 1.48
FOXA3-202ENST00000594297 LRRC9Q6ZRR7 1453 aa24.3■■□□□ 1.48
FOXA3-202ENST00000594297 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
FOXA3-202ENST00000594297 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
FOXA3-202ENST00000594297 RGS17Q9UGC6 210 aaPredicted RBP24.27■■□□□ 1.48
FOXA3-202ENST00000594297 LTKP29376 864 aa24.26■■□□□ 1.47
FOXA3-202ENST00000594297 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
FOXA3-202ENST00000594297 ARHGAP31Q2M1Z3 1444 aa24.22■■□□□ 1.47
FOXA3-202ENST00000594297 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
FOXA3-202ENST00000594297 TXNDC2Q86VQ3 553 aa24.21■■□□□ 1.47
FOXA3-202ENST00000594297 ROBO1Q9Y6N7 1651 aa24.21■■□□□ 1.47
FOXA3-202ENST00000594297 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
FOXA3-202ENST00000594297 VPS8Q8N3P4 1428 aa24.19■■□□□ 1.46
FOXA3-202ENST00000594297 KDM5AP29375 1690 aaKnown RBP24.19■■□□□ 1.46
FOXA3-202ENST00000594297 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
FOXA3-202ENST00000594297 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
FOXA3-202ENST00000594297 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
FOXA3-202ENST00000594297 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
FOXA3-202ENST00000594297 EFCAB6Q5THR3 1501 aa24.16■■□□□ 1.46
FOXA3-202ENST00000594297 SETD1AO15047 1707 aaKnown RBP24.15■■□□□ 1.46
FOXA3-202ENST00000594297 TMEM94Q12767 1356 aa24.15■■□□□ 1.46
FOXA3-202ENST00000594297 EID1Q9Y6B2 187 aa24.14■■□□□ 1.45
FOXA3-202ENST00000594297 NWD1Q149M9 1564 aa24.13■■□□□ 1.45
FOXA3-202ENST00000594297 TET3O43151 1660 aa24.11■■□□□ 1.45
FOXA3-202ENST00000594297 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
FOXA3-202ENST00000594297 POTEAQ6S8J7 498 aa24.11■■□□□ 1.45
FOXA3-202ENST00000594297 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
FOXA3-202ENST00000594297 ADGRB3O60242 1522 aa24.1■■□□□ 1.45
FOXA3-202ENST00000594297 ABCC5O15440 1437 aa24.1■■□□□ 1.45
FOXA3-202ENST00000594297 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
FOXA3-202ENST00000594297 LMTK2Q8IWU2 1503 aa24.09■■□□□ 1.45
FOXA3-202ENST00000594297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.06■■□□□ 1.44
FOXA3-202ENST00000594297 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
FOXA3-202ENST00000594297 RRP7BPQ9NSQ0 103 aa24.05■■□□□ 1.44
FOXA3-202ENST00000594297 STAG3Q9UJ98 1225 aa24.05■■□□□ 1.44
FOXA3-202ENST00000594297 KANK1Q14678 1352 aa24.04■■□□□ 1.44
FOXA3-202ENST00000594297 DAPK1P53355 1430 aa24.04■■□□□ 1.44
FOXA3-202ENST00000594297 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
FOXA3-202ENST00000594297 KCNA6P17658 529 aa24.03■■□□□ 1.44
FOXA3-202ENST00000594297 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
FOXA3-202ENST00000594297 NOS1P29475 1434 aa24.01■■□□□ 1.43
FOXA3-202ENST00000594297 IDI1Q13907 227 aa24■■□□□ 1.43
FOXA3-202ENST00000594297 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
FOXA3-202ENST00000594297 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
FOXA3-202ENST00000594297 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
FOXA3-202ENST00000594297 MSH6P52701 1360 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms