RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 A2ML1A8K2U0 1454 aa25.33■■□□□ 1.65
GTF2F1-203ENST00000594213 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
GTF2F1-203ENST00000594213 TSPY4P0CV99 314 aa25.31■■□□□ 1.64
GTF2F1-203ENST00000594213 TSPY10P0CW01 314 aa25.31■■□□□ 1.64
GTF2F1-203ENST00000594213 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
GTF2F1-203ENST00000594213 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
GTF2F1-203ENST00000594213 TNRQ92752 1358 aa25.3■■□□□ 1.64
GTF2F1-203ENST00000594213 FAM135AQ9P2D6 1515 aa25.29■■□□□ 1.64
GTF2F1-203ENST00000594213 WASHC2CQ9Y4E1 1318 aa25.29■■□□□ 1.64
GTF2F1-203ENST00000594213 PZPP20742 1482 aa25.28■■□□□ 1.64
GTF2F1-203ENST00000594213 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
GTF2F1-203ENST00000594213 MAP3K1Q13233 1512 aa25.25■■□□□ 1.63
GTF2F1-203ENST00000594213 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
GTF2F1-203ENST00000594213 MIA2Q96PC5 1412 aa25.23■■□□□ 1.63
GTF2F1-203ENST00000594213 DISP3Q9P2K9 1392 aa25.2■■□□□ 1.63
GTF2F1-203ENST00000594213 UBAP1LF5GYI3 381 aa25.18■■□□□ 1.62
GTF2F1-203ENST00000594213 ILDR2Q71H61 639 aa25.18■■□□□ 1.62
GTF2F1-203ENST00000594213 MYOM3Q5VTT5 1437 aa25.18■■□□□ 1.62
GTF2F1-203ENST00000594213 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
GTF2F1-203ENST00000594213 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
GTF2F1-203ENST00000594213 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
GTF2F1-203ENST00000594213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.16■■□□□ 1.62
GTF2F1-203ENST00000594213 ANKLE2Q86XL3 938 aa25.15■■□□□ 1.62
GTF2F1-203ENST00000594213 NEURL4Q96JN8 1562 aa25.14■■□□□ 1.62
GTF2F1-203ENST00000594213 ABCC3O15438 1527 aa25.12■■□□□ 1.61
GTF2F1-203ENST00000594213 RNF17Q9BXT8 1623 aaKnown RBP25.12■■□□□ 1.61
GTF2F1-203ENST00000594213 MED14O60244 1454 aa25.09■■□□□ 1.61
GTF2F1-203ENST00000594213 UGGT1Q9NYU2 1555 aa25.09■■□□□ 1.61
GTF2F1-203ENST00000594213 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
GTF2F1-203ENST00000594213 SPATA31D1Q6ZQQ2 1576 aa25.07■■□□□ 1.6
GTF2F1-203ENST00000594213 MROH1Q8NDA8 1641 aa25.07■■□□□ 1.6
GTF2F1-203ENST00000594213 ABCC5O15440 1437 aa25.06■■□□□ 1.6
GTF2F1-203ENST00000594213 ERVK-7P63135 1459 aa25.06■■□□□ 1.6
GTF2F1-203ENST00000594213 NPHP4O75161 1426 aaPredicted RBP25.05■■□□□ 1.6
GTF2F1-203ENST00000594213 CPS1P31327 1500 aa25.05■■□□□ 1.6
GTF2F1-203ENST00000594213 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
GTF2F1-203ENST00000594213 DUOX2Q9NRD8 1548 aa25.04■■□□□ 1.6
GTF2F1-203ENST00000594213 KIF15Q9NS87 1388 aa25.03■■□□□ 1.6
GTF2F1-203ENST00000594213 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
GTF2F1-203ENST00000594213 SOCS7O14512 581 aa25.02■■□□□ 1.6
GTF2F1-203ENST00000594213 POLR1AO95602 1720 aaPredicted RBP25.02■■□□□ 1.6
GTF2F1-203ENST00000594213 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
GTF2F1-203ENST00000594213 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
GTF2F1-203ENST00000594213 RRP7BPQ9NSQ0 103 aa25■■□□□ 1.59
GTF2F1-203ENST00000594213 ARHGAP31Q2M1Z3 1444 aa24.99■■□□□ 1.59
GTF2F1-203ENST00000594213 TOM1O60784 492 aa24.98■■□□□ 1.59
GTF2F1-203ENST00000594213 ERBINQ96RT1 1412 aa24.97■■□□□ 1.59
GTF2F1-203ENST00000594213 APLP2Q06481 763 aa24.97■■□□□ 1.59
GTF2F1-203ENST00000594213 DAPK1P53355 1430 aa24.95■■□□□ 1.59
GTF2F1-203ENST00000594213 HSPA1LP34931 641 aa24.95■■□□□ 1.58
GTF2F1-203ENST00000594213 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.58
GTF2F1-203ENST00000594213 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
GTF2F1-203ENST00000594213 PRDM15P57071 1507 aaPredicted RBP24.93■■□□□ 1.58
GTF2F1-203ENST00000594213 PIP4K2BP78356 416 aa24.93■■□□□ 1.58
GTF2F1-203ENST00000594213 LTKP29376 864 aa24.92■■□□□ 1.58
GTF2F1-203ENST00000594213 ARHGAP23Q9P227 1491 aa24.9■■□□□ 1.58
GTF2F1-203ENST00000594213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.9■■□□□ 1.582e-7■■■■□ 21.9
GTF2F1-203ENST00000594213 CEP152O94986 1710 aa24.89■■□□□ 1.58
GTF2F1-203ENST00000594213 IQGAP1P46940 1657 aa24.89■■□□□ 1.58
GTF2F1-203ENST00000594213 ALKQ9UM73 1620 aa24.89■■□□□ 1.57
GTF2F1-203ENST00000594213 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
GTF2F1-203ENST00000594213 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
GTF2F1-203ENST00000594213 SCAF11Q99590 1463 aaKnown RBP24.88■■□□□ 1.57
GTF2F1-203ENST00000594213 SLIT1O75093 1534 aa24.87■■□□□ 1.57
GTF2F1-203ENST00000594213 LRRC7Q96NW7 1537 aa24.87■■□□□ 1.57
GTF2F1-203ENST00000594213 TXNDC2Q86VQ3 553 aa24.87■■□□□ 1.57
GTF2F1-203ENST00000594213 ANKRD30AQ9BXX3 1397 aa24.87■■□□□ 1.57
GTF2F1-203ENST00000594213 CROCC2H7BZ55 1655 aa24.86■■□□□ 1.57
GTF2F1-203ENST00000594213 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
GTF2F1-203ENST00000594213 KANK1Q14678 1352 aa24.84■■□□□ 1.57
GTF2F1-203ENST00000594213 LMTK2Q8IWU2 1503 aa24.84■■□□□ 1.57
GTF2F1-203ENST00000594213 IDI1Q13907 227 aa24.82■■□□□ 1.56
GTF2F1-203ENST00000594213 STRCP1A6NGW2 1772 aa24.82■■□□□ 1.56
GTF2F1-203ENST00000594213 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
GTF2F1-203ENST00000594213 CFAP65Q6ZU64 1925 aaKnown RBP24.81■■□□□ 1.56
GTF2F1-203ENST00000594213 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
GTF2F1-203ENST00000594213 ADGRL2O95490 1459 aa24.78■■□□□ 1.56
GTF2F1-203ENST00000594213 NOS1P29475 1434 aa24.78■■□□□ 1.56
GTF2F1-203ENST00000594213 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
GTF2F1-203ENST00000594213 SYNMO15061 1565 aa24.74■■□□□ 1.55
GTF2F1-203ENST00000594213 PIK3C2BO00750 1634 aa24.74■■□□□ 1.55
GTF2F1-203ENST00000594213 MED1Q15648 1581 aaPredicted RBP24.72■■□□□ 1.55
GTF2F1-203ENST00000594213 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
GTF2F1-203ENST00000594213 SLC52A1Q9NWF4 448 aa24.71■■□□□ 1.55
GTF2F1-203ENST00000594213 EFCAB6Q5THR3 1501 aa24.71■■□□□ 1.55
GTF2F1-203ENST00000594213 ANKRD50Q9ULJ7 1429 aa24.69■■□□□ 1.54
GTF2F1-203ENST00000594213 KCNA6P17658 529 aa24.68■■□□□ 1.54
GTF2F1-203ENST00000594213 KDM5AP29375 1690 aaKnown RBP24.67■■□□□ 1.54
GTF2F1-203ENST00000594213 TET3O43151 1660 aa24.66■■□□□ 1.54
GTF2F1-203ENST00000594213 SLC26A8Q96RN1 970 aa24.65■■□□□ 1.54
GTF2F1-203ENST00000594213 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.53
GTF2F1-203ENST00000594213 TMEM94Q12767 1356 aa24.63■■□□□ 1.53
GTF2F1-203ENST00000594213 ADGRB3O60242 1522 aa24.61■■□□□ 1.53
GTF2F1-203ENST00000594213 SENP3Q9H4L4 574 aaPredicted RBP24.61■■□□□ 1.53
GTF2F1-203ENST00000594213 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
GTF2F1-203ENST00000594213 PROSER2Q86WR7 435 aaPredicted RBP24.58■■□□□ 1.53
GTF2F1-203ENST00000594213 ZFYVE9O95405 1425 aa24.58■■□□□ 1.53
GTF2F1-203ENST00000594213 XIRP1Q702N8 1843 aaKnown RBP24.58■■□□□ 1.53
GTF2F1-203ENST00000594213 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
GTF2F1-203ENST00000594213 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms