RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
SOD3-202ENST00000593742 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
SOD3-202ENST00000593742 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
SOD3-202ENST00000593742 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
SOD3-202ENST00000593742 ABCC5O15440 1437 aa18.62■□□□□ 0.57
SOD3-202ENST00000593742 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
SOD3-202ENST00000593742 DAPK1P53355 1430 aa18.6■□□□□ 0.57
SOD3-202ENST00000593742 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
SOD3-202ENST00000593742 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
SOD3-202ENST00000593742 CAMSAP1Q5T5Y3 1602 aa18.6■□□□□ 0.57
SOD3-202ENST00000593742 FBXO31Q5XUX0 539 aaPredicted RBP18.59■□□□□ 0.57
SOD3-202ENST00000593742 CHIC2Q9UKJ5 165 aa18.59■□□□□ 0.57
SOD3-202ENST00000593742 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.57
SOD3-202ENST00000593742 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.57
SOD3-202ENST00000593742 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
SOD3-202ENST00000593742 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
SOD3-202ENST00000593742 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
SOD3-202ENST00000593742 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
SOD3-202ENST00000593742 DUOX2Q9NRD8 1548 aa18.58■□□□□ 0.56
SOD3-202ENST00000593742 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
SOD3-202ENST00000593742 RNF17Q9BXT8 1623 aaKnown RBP18.56■□□□□ 0.56
SOD3-202ENST00000593742 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
SOD3-202ENST00000593742 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
SOD3-202ENST00000593742 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
SOD3-202ENST00000593742 TNRQ92752 1358 aa18.55■□□□□ 0.56
SOD3-202ENST00000593742 FAM135AQ9P2D6 1515 aa18.55■□□□□ 0.56
SOD3-202ENST00000593742 PZPP20742 1482 aa18.55■□□□□ 0.56
SOD3-202ENST00000593742 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
SOD3-202ENST00000593742 NCKAP5LQ9HCH0 1330 aa18.54■□□□□ 0.56
SOD3-202ENST00000593742 ABCC3O15438 1527 aa18.54■□□□□ 0.56
SOD3-202ENST00000593742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
SOD3-202ENST00000593742 CEP152O94986 1710 aa18.52■□□□□ 0.56
SOD3-202ENST00000593742 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
SOD3-202ENST00000593742 CERKQ8TCT0 537 aa18.52■□□□□ 0.56
SOD3-202ENST00000593742 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.55
SOD3-202ENST00000593742 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
SOD3-202ENST00000593742 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
SOD3-202ENST00000593742 PTPRTO14522 1441 aa18.51■□□□□ 0.55
SOD3-202ENST00000593742 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
SOD3-202ENST00000593742 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
SOD3-202ENST00000593742 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
SOD3-202ENST00000593742 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
SOD3-202ENST00000593742 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
SOD3-202ENST00000593742 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
SOD3-202ENST00000593742 PKD2Q13563 968 aa18.45■□□□□ 0.54
SOD3-202ENST00000593742 ERVK-7P63135 1459 aa18.44■□□□□ 0.54
SOD3-202ENST00000593742 KANK1Q14678 1352 aa18.43■□□□□ 0.54
SOD3-202ENST00000593742 ITGAEP38570 1179 aa18.43■□□□□ 0.54
SOD3-202ENST00000593742 NLRP1Q9C000 1473 aa18.43■□□□□ 0.54
SOD3-202ENST00000593742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
SOD3-202ENST00000593742 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
SOD3-202ENST00000593742 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
SOD3-202ENST00000593742 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
SOD3-202ENST00000593742 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
SOD3-202ENST00000593742 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
SOD3-202ENST00000593742 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
SOD3-202ENST00000593742 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
SOD3-202ENST00000593742 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
SOD3-202ENST00000593742 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
SOD3-202ENST00000593742 ANKLE2Q86XL3 938 aa18.37■□□□□ 0.53
SOD3-202ENST00000593742 NEURL4Q96JN8 1562 aa18.35■□□□□ 0.53
SOD3-202ENST00000593742 ARHGAP31Q2M1Z3 1444 aa18.35■□□□□ 0.53
SOD3-202ENST00000593742 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
SOD3-202ENST00000593742 VWDEQ8N2E2 1590 aa18.33■□□□□ 0.52
SOD3-202ENST00000593742 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
SOD3-202ENST00000593742 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
SOD3-202ENST00000593742 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
SOD3-202ENST00000593742 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
SOD3-202ENST00000593742 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
SOD3-202ENST00000593742 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
SOD3-202ENST00000593742 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
SOD3-202ENST00000593742 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
SOD3-202ENST00000593742 SYNMO15061 1565 aa18.26■□□□□ 0.51
SOD3-202ENST00000593742 UNC13BO14795 1591 aa18.25■□□□□ 0.51
SOD3-202ENST00000593742 IDI1Q13907 227 aa18.25■□□□□ 0.51
SOD3-202ENST00000593742 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
SOD3-202ENST00000593742 MED14O60244 1454 aa18.25■□□□□ 0.51
SOD3-202ENST00000593742 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
SOD3-202ENST00000593742 SCAF11Q99590 1463 aaKnown RBP18.25■□□□□ 0.51
SOD3-202ENST00000593742 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
SOD3-202ENST00000593742 TET3O43151 1660 aa18.24■□□□□ 0.51
SOD3-202ENST00000593742 LTKP29376 864 aa18.23■□□□□ 0.51
SOD3-202ENST00000593742 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
SOD3-202ENST00000593742 NOS1P29475 1434 aa18.23■□□□□ 0.51
SOD3-202ENST00000593742 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
SOD3-202ENST00000593742 NUP155O75694 1391 aa18.21■□□□□ 0.51
SOD3-202ENST00000593742 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
SOD3-202ENST00000593742 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
SOD3-202ENST00000593742 SLIT1O75093 1534 aa18.21■□□□□ 0.51
SOD3-202ENST00000593742 GCC2Q8IWJ2 1684 aa18.21■□□□□ 0.51
SOD3-202ENST00000593742 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
SOD3-202ENST00000593742 CPS1P31327 1500 aa18.2■□□□□ 0.5
SOD3-202ENST00000593742 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
SOD3-202ENST00000593742 ADGRB3O60242 1522 aa18.19■□□□□ 0.5
SOD3-202ENST00000593742 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
SOD3-202ENST00000593742 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
SOD3-202ENST00000593742 IQGAP3Q86VI3 1631 aa18.18■□□□□ 0.5
SOD3-202ENST00000593742 E9PCH4 1651 aa18.18■□□□□ 0.5
SOD3-202ENST00000593742 BCANQ96GW7 911 aa18.17■□□□□ 0.5
SOD3-202ENST00000593742 PIP4K2BP78356 416 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms