RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
GTF2F1-202ENST00000593678 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
GTF2F1-202ENST00000593678 MAGI2Q86UL8 1455 aa21.49■■□□□ 1.03
GTF2F1-202ENST00000593678 IQGAP3Q86VI3 1631 aa21.49■■□□□ 1.03
GTF2F1-202ENST00000593678 A2MP01023 1474 aa21.48■■□□□ 1.03
GTF2F1-202ENST00000593678 KANK1Q14678 1352 aa21.48■■□□□ 1.03
GTF2F1-202ENST00000593678 KIF3BO15066 747 aa21.46■■□□□ 1.03
GTF2F1-202ENST00000593678 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
GTF2F1-202ENST00000593678 DEPDC5O75140 1603 aa21.43■■□□□ 1.02
GTF2F1-202ENST00000593678 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
GTF2F1-202ENST00000593678 ABCA6Q8N139 1617 aa21.43■■□□□ 1.02
GTF2F1-202ENST00000593678 ZMYM4Q5VZL5 1548 aa21.41■■□□□ 1.02
GTF2F1-202ENST00000593678 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
GTF2F1-202ENST00000593678 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
GTF2F1-202ENST00000593678 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
GTF2F1-202ENST00000593678 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
GTF2F1-202ENST00000593678 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
GTF2F1-202ENST00000593678 RNF17Q9BXT8 1623 aaKnown RBP21.35■■□□□ 1.01
GTF2F1-202ENST00000593678 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
GTF2F1-202ENST00000593678 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
GTF2F1-202ENST00000593678 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
GTF2F1-202ENST00000593678 TET3O43151 1660 aa21.33■■□□□ 1.01
GTF2F1-202ENST00000593678 YEATS2Q9ULM3 1422 aa21.33■■□□□ 1.01
GTF2F1-202ENST00000593678 VWDEQ8N2E2 1590 aa21.33■■□□□ 1
GTF2F1-202ENST00000593678 GGT6Q6P531 493 aa21.32■■□□□ 1
GTF2F1-202ENST00000593678 L3MBTL2Q969R5 705 aa21.32■■□□□ 1
GTF2F1-202ENST00000593678 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
GTF2F1-202ENST00000593678 ATP10AO60312 1499 aa21.3■■□□□ 1
GTF2F1-202ENST00000593678 E9PCH4 1651 aa21.28■■□□□ 1
GTF2F1-202ENST00000593678 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
GTF2F1-202ENST00000593678 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
GTF2F1-202ENST00000593678 EFCAB6Q5THR3 1501 aa21.25■□□□□ 0.99
GTF2F1-202ENST00000593678 REREQ9P2R6 1566 aa21.24■□□□□ 0.99
GTF2F1-202ENST00000593678 CEP152O94986 1710 aa21.24■□□□□ 0.99
GTF2F1-202ENST00000593678 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
GTF2F1-202ENST00000593678 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
GTF2F1-202ENST00000593678 SPHKAPQ2M3C7 1700 aa21.23■□□□□ 0.99
GTF2F1-202ENST00000593678 ARHGEF40Q8TER5 1519 aa21.23■□□□□ 0.99
GTF2F1-202ENST00000593678 TRPM2O94759 1503 aa21.22■□□□□ 0.99
GTF2F1-202ENST00000593678 ZC3H13Q5T200 1668 aaKnown RBP21.2■□□□□ 0.98
GTF2F1-202ENST00000593678 ABCC3O15438 1527 aa21.2■□□□□ 0.98
GTF2F1-202ENST00000593678 PTPRTO14522 1441 aa21.2■□□□□ 0.98
GTF2F1-202ENST00000593678 AGLP35573 1532 aa21.19■□□□□ 0.98
GTF2F1-202ENST00000593678 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
GTF2F1-202ENST00000593678 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
GTF2F1-202ENST00000593678 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
GTF2F1-202ENST00000593678 RGL3Q3MIN7 710 aa21.14■□□□□ 0.97
GTF2F1-202ENST00000593678 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
GTF2F1-202ENST00000593678 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
GTF2F1-202ENST00000593678 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
GTF2F1-202ENST00000593678 NPATQ14207 1427 aa21.12■□□□□ 0.97
GTF2F1-202ENST00000593678 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
GTF2F1-202ENST00000593678 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
GTF2F1-202ENST00000593678 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
GTF2F1-202ENST00000593678 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
GTF2F1-202ENST00000593678 ARHGAP31Q2M1Z3 1444 aa21.09■□□□□ 0.97
GTF2F1-202ENST00000593678 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
GTF2F1-202ENST00000593678 ARID4BQ4LE39 1312 aaPredicted RBP21.09■□□□□ 0.97
GTF2F1-202ENST00000593678 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
GTF2F1-202ENST00000593678 KIF1BO60333 1816 aa21.07■□□□□ 0.96
GTF2F1-202ENST00000593678 CFAP65Q6ZU64 1925 aaKnown RBP21.07■□□□□ 0.96
GTF2F1-202ENST00000593678 MLECQ14165 292 aa21.07■□□□□ 0.96
GTF2F1-202ENST00000593678 SPATA31E1Q6ZUB1 1445 aa21.06■□□□□ 0.96
GTF2F1-202ENST00000593678 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
GTF2F1-202ENST00000593678 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
GTF2F1-202ENST00000593678 SIGLEC1Q9BZZ2 1709 aa21.03■□□□□ 0.96
GTF2F1-202ENST00000593678 RALGAPBQ86X10 1494 aa21.03■□□□□ 0.96
GTF2F1-202ENST00000593678 UGGT1Q9NYU2 1555 aa21.03■□□□□ 0.96
GTF2F1-202ENST00000593678 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
GTF2F1-202ENST00000593678 NOS1P29475 1434 aa21.01■□□□□ 0.95
GTF2F1-202ENST00000593678 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
GTF2F1-202ENST00000593678 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
GTF2F1-202ENST00000593678 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
GTF2F1-202ENST00000593678 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
GTF2F1-202ENST00000593678 PREX1Q8TCU6 1659 aa20.98■□□□□ 0.95
GTF2F1-202ENST00000593678 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
GTF2F1-202ENST00000593678 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
GTF2F1-202ENST00000593678 SLC52A1Q9NWF4 448 aa20.98■□□□□ 0.95
GTF2F1-202ENST00000593678 SYNMO15061 1565 aa20.95■□□□□ 0.94
GTF2F1-202ENST00000593678 ADGRB3O60242 1522 aa20.95■□□□□ 0.94
GTF2F1-202ENST00000593678 PIK3C2BO00750 1634 aa20.94■□□□□ 0.94
GTF2F1-202ENST00000593678 TRPM1Q7Z4N2 1603 aa20.94■□□□□ 0.94
GTF2F1-202ENST00000593678 USP47Q96K76 1375 aa20.93■□□□□ 0.94
GTF2F1-202ENST00000593678 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
GTF2F1-202ENST00000593678 MROH2AA6NES4 1674 aa20.92■□□□□ 0.94
GTF2F1-202ENST00000593678 RPGRIP1LQ68CZ1 1315 aa20.91■□□□□ 0.94
GTF2F1-202ENST00000593678 MADDQ8WXG6 1647 aa20.91■□□□□ 0.94
GTF2F1-202ENST00000593678 MYOM2P54296 1465 aa20.91■□□□□ 0.94
GTF2F1-202ENST00000593678 FBXO31Q5XUX0 539 aaPredicted RBP20.9■□□□□ 0.94
GTF2F1-202ENST00000593678 ZMYM3Q14202 1370 aa20.89■□□□□ 0.93
GTF2F1-202ENST00000593678 IDI1Q13907 227 aa20.89■□□□□ 0.93
GTF2F1-202ENST00000593678 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
GTF2F1-202ENST00000593678 SPATA31D1Q6ZQQ2 1576 aa20.87■□□□□ 0.93
GTF2F1-202ENST00000593678 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
GTF2F1-202ENST00000593678 GPRASP1Q5JY77 1395 aa20.86■□□□□ 0.93
GTF2F1-202ENST00000593678 LAMC1P11047 1609 aa20.86■□□□□ 0.93
GTF2F1-202ENST00000593678 DDX10Q13206 875 aaKnown RBP20.85■□□□□ 0.93
GTF2F1-202ENST00000593678 PPLO60437 1756 aa20.84■□□□□ 0.93
GTF2F1-202ENST00000593678 NBPF1Q3BBV0 1214 aa20.84■□□□□ 0.93
GTF2F1-202ENST00000593678 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms