RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 WASHC2CQ9Y4E1 1318 aa27.86■■■□□ 2.05
PSME3-216ENST00000593111 A2ML1A8K2U0 1454 aa27.85■■■□□ 2.05
PSME3-216ENST00000593111 CAMSAP2Q08AD1 1489 aa27.85■■■□□ 2.05
PSME3-216ENST00000593111 TSPY4P0CV99 314 aa27.84■■■□□ 2.05
PSME3-216ENST00000593111 TSPY10P0CW01 314 aa27.84■■■□□ 2.05
PSME3-216ENST00000593111 TNRQ92752 1358 aa27.83■■■□□ 2.05
PSME3-216ENST00000593111 DNMT1P26358 1616 aaKnown RBP27.81■■■□□ 2.04
PSME3-216ENST00000593111 SPATA31D1Q6ZQQ2 1576 aa27.79■■■□□ 2.04
PSME3-216ENST00000593111 SOCS7O14512 581 aa27.79■■■□□ 2.04
PSME3-216ENST00000593111 KDM5DQ9BY66 1539 aa27.77■■■□□ 2.04
PSME3-216ENST00000593111 PZPP20742 1482 aa27.76■■■□□ 2.03
PSME3-216ENST00000593111 ANKLE2Q86XL3 938 aa27.74■■■□□ 2.03
PSME3-216ENST00000593111 THEMISQ8N1K5 641 aaPredicted RBP27.74■■■□□ 2.03
PSME3-216ENST00000593111 LOC105371045A0A1W2PR82 267 aa27.72■■■□□ 2.03
PSME3-216ENST00000593111 ARHGEF5Q12774 1597 aa27.72■■■□□ 2.03
PSME3-216ENST00000593111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.72■■■□□ 2.03
PSME3-216ENST00000593111 SCAF1Q9H7N4 1312 aaKnown RBP27.71■■■□□ 2.03
PSME3-216ENST00000593111 MIA2Q96PC5 1412 aa27.71■■■□□ 2.03
PSME3-216ENST00000593111 FAM135AQ9P2D6 1515 aa27.71■■■□□ 2.03
PSME3-216ENST00000593111 POLR1AO95602 1720 aaPredicted RBP27.68■■■□□ 2.02
PSME3-216ENST00000593111 LRRC9Q6ZRR7 1453 aa27.68■■■□□ 2.02
PSME3-216ENST00000593111 PIP4K2BP78356 416 aa27.67■■■□□ 2.02
PSME3-216ENST00000593111 VPS8Q8N3P4 1428 aa27.66■■■□□ 2.02
PSME3-216ENST00000593111 NEURL4Q96JN8 1562 aa27.65■■■□□ 2.02
PSME3-216ENST00000593111 SHANK2Q9UPX8 1470 aa27.65■■■□□ 2.02
PSME3-216ENST00000593111 TOM1O60784 492 aa27.65■■■□□ 2.02
PSME3-216ENST00000593111 NLRP1Q9C000 1473 aa27.64■■■□□ 2.02
PSME3-216ENST00000593111 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
PSME3-216ENST00000593111 UGGT1Q9NYU2 1555 aa27.63■■■□□ 2.01
PSME3-216ENST00000593111 CPS1P31327 1500 aa27.62■■■□□ 2.01
PSME3-216ENST00000593111 HSPA1LP34931 641 aa27.59■■■□□ 2.01
PSME3-216ENST00000593111 NPHP4O75161 1426 aaPredicted RBP27.58■■■□□ 2.01
PSME3-216ENST00000593111 ABCC3O15438 1527 aa27.57■■■□□ 2
PSME3-216ENST00000593111 MAST1Q9Y2H9 1570 aa27.56■■■□□ 2
PSME3-216ENST00000593111 RNF17Q9BXT8 1623 aaKnown RBP27.56■■■□□ 2
PSME3-216ENST00000593111 MED14O60244 1454 aa27.54■■■□□ 2
PSME3-216ENST00000593111 MYOM3Q5VTT5 1437 aa27.54■■■□□ 2
PSME3-216ENST00000593111 VWDEQ8N2E2 1590 aa27.53■■■□□ 2
PSME3-216ENST00000593111 DEPDC5O75140 1603 aa27.52■■■□□ 2
PSME3-216ENST00000593111 MAP3K1Q13233 1512 aa27.51■■■□□ 2
PSME3-216ENST00000593111 ZC3H13Q5T200 1668 aaKnown RBP27.51■■□□□ 1.99
PSME3-216ENST00000593111 EIF2AK4Q9P2K8 1649 aaKnown RBP27.5■■□□□ 1.99
PSME3-216ENST00000593111 ERVK-7P63135 1459 aa27.5■■□□□ 1.99
PSME3-216ENST00000593111 CFAP65Q6ZU64 1925 aaKnown RBP27.49■■□□□ 1.99
PSME3-216ENST00000593111 IQGAP1P46940 1657 aa27.48■■□□□ 1.99
PSME3-216ENST00000593111 APLP2Q06481 763 aa27.47■■□□□ 1.99
PSME3-216ENST00000593111 RRP7BPQ9NSQ0 103 aa27.47■■□□□ 1.99
PSME3-216ENST00000593111 DUOX2Q9NRD8 1548 aa27.46■■□□□ 1.99
PSME3-216ENST00000593111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.992e-7■■■□□ 18.6
PSME3-216ENST00000593111 MROH1Q8NDA8 1641 aa27.45■■□□□ 1.99
PSME3-216ENST00000593111 CEP152O94986 1710 aa27.45■■□□□ 1.99
PSME3-216ENST00000593111 KIF15Q9NS87 1388 aa27.44■■□□□ 1.98
PSME3-216ENST00000593111 SENP3Q9H4L4 574 aaPredicted RBP27.43■■□□□ 1.98
PSME3-216ENST00000593111 TXNDC2Q86VQ3 553 aa27.42■■□□□ 1.98
PSME3-216ENST00000593111 ABCC5O15440 1437 aa27.39■■□□□ 1.97
PSME3-216ENST00000593111 LRRC7Q96NW7 1537 aa27.38■■□□□ 1.97
PSME3-216ENST00000593111 LTKP29376 864 aa27.38■■□□□ 1.97
PSME3-216ENST00000593111 UBR1Q8IWV7 1749 aa27.38■■□□□ 1.97
PSME3-216ENST00000593111 STRCP1A6NGW2 1772 aa27.37■■□□□ 1.97
PSME3-216ENST00000593111 MED1Q15648 1581 aaPredicted RBP27.37■■□□□ 1.97
PSME3-216ENST00000593111 EID1Q9Y6B2 187 aa27.37■■□□□ 1.97
PSME3-216ENST00000593111 SCAF11Q99590 1463 aaKnown RBP27.37■■□□□ 1.97
PSME3-216ENST00000593111 ERBINQ96RT1 1412 aa27.35■■□□□ 1.97
PSME3-216ENST00000593111 STAG3Q9UJ98 1225 aa27.35■■□□□ 1.97
PSME3-216ENST00000593111 CHIC2Q9UKJ5 165 aa27.35■■□□□ 1.97
PSME3-216ENST00000593111 KANK1Q14678 1352 aa27.35■■□□□ 1.97
PSME3-216ENST00000593111 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
PSME3-216ENST00000593111 ALKQ9UM73 1620 aa27.34■■□□□ 1.97
PSME3-216ENST00000593111 ARHGAP31Q2M1Z3 1444 aa27.34■■□□□ 1.97
PSME3-216ENST00000593111 PHF23Q9BUL5 403 aaPredicted RBP27.33■■□□□ 1.97
PSME3-216ENST00000593111 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
PSME3-216ENST00000593111 DAPK1P53355 1430 aa27.31■■□□□ 1.96
PSME3-216ENST00000593111 CROCC2H7BZ55 1655 aa27.3■■□□□ 1.96
PSME3-216ENST00000593111 ARHGAP23Q9P227 1491 aa27.29■■□□□ 1.96
PSME3-216ENST00000593111 SLIT1O75093 1534 aa27.29■■□□□ 1.96
PSME3-216ENST00000593111 SYNMO15061 1565 aa27.28■■□□□ 1.96
PSME3-216ENST00000593111 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
PSME3-216ENST00000593111 FGD6Q6ZV73 1430 aa27.26■■□□□ 1.95
PSME3-216ENST00000593111 IDI1Q13907 227 aa27.25■■□□□ 1.95
PSME3-216ENST00000593111 TMEM2Q9UHN6 1383 aa27.24■■□□□ 1.95
PSME3-216ENST00000593111 PIK3C2BO00750 1634 aa27.24■■□□□ 1.95
PSME3-216ENST00000593111 SLC26A8Q96RN1 970 aa27.18■■□□□ 1.94
PSME3-216ENST00000593111 EFCAB6Q5THR3 1501 aa27.17■■□□□ 1.94
PSME3-216ENST00000593111 FAM50AQ14320 339 aaKnown RBP27.17■■□□□ 1.94
PSME3-216ENST00000593111 BCANQ96GW7 911 aa27.16■■□□□ 1.94
PSME3-216ENST00000593111 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
PSME3-216ENST00000593111 KCNA6P17658 529 aa27.15■■□□□ 1.94
PSME3-216ENST00000593111 PROSER2Q86WR7 435 aaPredicted RBP27.14■■□□□ 1.94
PSME3-216ENST00000593111 XIRP1Q702N8 1843 aaKnown RBP27.13■■□□□ 1.93
PSME3-216ENST00000593111 TMEM94Q12767 1356 aa27.12■■□□□ 1.93
PSME3-216ENST00000593111 SLC52A1Q9NWF4 448 aa27.12■■□□□ 1.93
PSME3-216ENST00000593111 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
PSME3-216ENST00000593111 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
PSME3-216ENST00000593111 NOS1P29475 1434 aa27.09■■□□□ 1.93
PSME3-216ENST00000593111 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
PSME3-216ENST00000593111 TET3O43151 1660 aa27.06■■□□□ 1.92
PSME3-216ENST00000593111 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
PSME3-216ENST00000593111 ANKRD50Q9ULJ7 1429 aa27.04■■□□□ 1.92
PSME3-216ENST00000593111 ADGRB3O60242 1522 aa27.04■■□□□ 1.92
PSME3-216ENST00000593111 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms