RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
PRKCSH-218ENST00000593053 PTPN23Q9H3S7 1636 aa20.39■□□□□ 0.86
PRKCSH-218ENST00000593053 FAM135AQ9P2D6 1515 aa20.39■□□□□ 0.85
PRKCSH-218ENST00000593053 ABCC5O15440 1437 aa20.39■□□□□ 0.85
PRKCSH-218ENST00000593053 PTPRTO14522 1441 aa20.38■□□□□ 0.85
PRKCSH-218ENST00000593053 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
PRKCSH-218ENST00000593053 MYO3AQ8NEV4 1616 aa20.38■□□□□ 0.85
PRKCSH-218ENST00000593053 PZPP20742 1482 aa20.37■□□□□ 0.85
PRKCSH-218ENST00000593053 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-218ENST00000593053 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
PRKCSH-218ENST00000593053 TNRQ92752 1358 aa20.36■□□□□ 0.85
PRKCSH-218ENST00000593053 DAPK1P53355 1430 aa20.36■□□□□ 0.85
PRKCSH-218ENST00000593053 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
PRKCSH-218ENST00000593053 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
PRKCSH-218ENST00000593053 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-218ENST00000593053 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
PRKCSH-218ENST00000593053 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
PRKCSH-218ENST00000593053 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-218ENST00000593053 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-218ENST00000593053 A2ML1A8K2U0 1454 aa20.32■□□□□ 0.84
PRKCSH-218ENST00000593053 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
PRKCSH-218ENST00000593053 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
PRKCSH-218ENST00000593053 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
PRKCSH-218ENST00000593053 ABCC3O15438 1527 aa20.31■□□□□ 0.84
PRKCSH-218ENST00000593053 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
PRKCSH-218ENST00000593053 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
PRKCSH-218ENST00000593053 PKD2Q13563 968 aa20.3■□□□□ 0.84
PRKCSH-218ENST00000593053 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-218ENST00000593053 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
PRKCSH-218ENST00000593053 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
PRKCSH-218ENST00000593053 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
PRKCSH-218ENST00000593053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.839e-11■□□□□ 8.5
PRKCSH-218ENST00000593053 ZC3H13Q5T200 1668 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-218ENST00000593053 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
PRKCSH-218ENST00000593053 LTBP4Q8N2S1 1624 aa20.22■□□□□ 0.83
PRKCSH-218ENST00000593053 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
PRKCSH-218ENST00000593053 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-218ENST00000593053 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-218ENST00000593053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRKCSH-218ENST00000593053 THEMISQ8N1K5 641 aaPredicted RBP20.21■□□□□ 0.83
PRKCSH-218ENST00000593053 SPATA31D1Q6ZQQ2 1576 aa20.21■□□□□ 0.83
PRKCSH-218ENST00000593053 KANK1Q14678 1352 aa20.2■□□□□ 0.82
PRKCSH-218ENST00000593053 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-218ENST00000593053 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
PRKCSH-218ENST00000593053 CEP152O94986 1710 aa20.19■□□□□ 0.82
PRKCSH-218ENST00000593053 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
PRKCSH-218ENST00000593053 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
PRKCSH-218ENST00000593053 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
PRKCSH-218ENST00000593053 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
PRKCSH-218ENST00000593053 NEURL4Q96JN8 1562 aa20.13■□□□□ 0.81
PRKCSH-218ENST00000593053 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
PRKCSH-218ENST00000593053 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
PRKCSH-218ENST00000593053 LMTK2Q8IWU2 1503 aa20.11■□□□□ 0.81
PRKCSH-218ENST00000593053 NPHP4O75161 1426 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-218ENST00000593053 VWDEQ8N2E2 1590 aa20.1■□□□□ 0.81
PRKCSH-218ENST00000593053 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-218ENST00000593053 MED14O60244 1454 aa20.08■□□□□ 0.81
PRKCSH-218ENST00000593053 ITGAEP38570 1179 aa20.08■□□□□ 0.81
PRKCSH-218ENST00000593053 ROCK1Q13464 1354 aa20.06■□□□□ 0.8
PRKCSH-218ENST00000593053 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
PRKCSH-218ENST00000593053 EFCAB6Q5THR3 1501 aa20.04■□□□□ 0.8
PRKCSH-218ENST00000593053 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
PRKCSH-218ENST00000593053 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
PRKCSH-218ENST00000593053 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
PRKCSH-218ENST00000593053 IDI1Q13907 227 aa20.03■□□□□ 0.8
PRKCSH-218ENST00000593053 LTKP29376 864 aa20.02■□□□□ 0.8
PRKCSH-218ENST00000593053 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
PRKCSH-218ENST00000593053 NOS1P29475 1434 aa20.02■□□□□ 0.79
PRKCSH-218ENST00000593053 SCAF11Q99590 1463 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-218ENST00000593053 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
PRKCSH-218ENST00000593053 EID1Q9Y6B2 187 aa20■□□□□ 0.79
PRKCSH-218ENST00000593053 SLIT1O75093 1534 aa20■□□□□ 0.79
PRKCSH-218ENST00000593053 CPS1P31327 1500 aa20■□□□□ 0.79
PRKCSH-218ENST00000593053 IQGAP1P46940 1657 aa20■□□□□ 0.79
PRKCSH-218ENST00000593053 SYNMO15061 1565 aa20■□□□□ 0.79
PRKCSH-218ENST00000593053 PIK3C2BO00750 1634 aa19.99■□□□□ 0.79
PRKCSH-218ENST00000593053 TMEM2Q9UHN6 1383 aa19.99■□□□□ 0.79
PRKCSH-218ENST00000593053 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
PRKCSH-218ENST00000593053 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
PRKCSH-218ENST00000593053 UNC13BO14795 1591 aa19.96■□□□□ 0.79
PRKCSH-218ENST00000593053 TET3O43151 1660 aa19.94■□□□□ 0.78
PRKCSH-218ENST00000593053 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-218ENST00000593053 NUP155O75694 1391 aa19.93■□□□□ 0.78
PRKCSH-218ENST00000593053 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
PRKCSH-218ENST00000593053 TOM1O60784 492 aa19.9■□□□□ 0.78
PRKCSH-218ENST00000593053 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-218ENST00000593053 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-218ENST00000593053 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
PRKCSH-218ENST00000593053 LRRC7Q96NW7 1537 aa19.88■□□□□ 0.77
PRKCSH-218ENST00000593053 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
PRKCSH-218ENST00000593053 IQGAP3Q86VI3 1631 aa19.87■□□□□ 0.77
PRKCSH-218ENST00000593053 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
PRKCSH-218ENST00000593053 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-218ENST00000593053 STRCP1A6NGW2 1772 aa19.85■□□□□ 0.77
PRKCSH-218ENST00000593053 E9PCH4 1651 aa19.84■□□□□ 0.77
PRKCSH-218ENST00000593053 BCANQ96GW7 911 aa19.84■□□□□ 0.77
PRKCSH-218ENST00000593053 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
PRKCSH-218ENST00000593053 NAIPQ13075 1403 aa19.83■□□□□ 0.76
PRKCSH-218ENST00000593053 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
PRKCSH-218ENST00000593053 ZFYVE9O95405 1425 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms