RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 MAGI2Q86UL8 1455 aa37.59■■■■□ 3.61
LDLRAD4-218ENST00000592991 SLC4A1APQ9BWU0 796 aaKnown RBP37.58■■■■□ 3.61
LDLRAD4-218ENST00000592991 KIF3BO15066 747 aa37.56■■■■□ 3.6
LDLRAD4-218ENST00000592991 DEPDC5O75140 1603 aa37.55■■■■□ 3.6
LDLRAD4-218ENST00000592991 FOXD1Q16676 465 aa37.55■■■■□ 3.6
LDLRAD4-218ENST00000592991 CLSPNQ9HAW4 1339 aa37.54■■■■□ 3.6
LDLRAD4-218ENST00000592991 FAM135AQ9P2D6 1515 aa37.53■■■■□ 3.6
LDLRAD4-218ENST00000592991 ARHGEF40Q8TER5 1519 aa37.52■■■■□ 3.6
LDLRAD4-218ENST00000592991 IQGAP3Q86VI3 1631 aa37.51■■■■□ 3.6
LDLRAD4-218ENST00000592991 MROH1Q8NDA8 1641 aa37.51■■■■□ 3.6
LDLRAD4-218ENST00000592991 ATP10AO60312 1499 aa37.48■■■■□ 3.59
LDLRAD4-218ENST00000592991 ZEB1P37275 1124 aaPredicted RBP37.47■■■■□ 3.59
LDLRAD4-218ENST00000592991 RNF17Q9BXT8 1623 aaKnown RBP37.46■■■■□ 3.59
LDLRAD4-218ENST00000592991 BCORL1Q5H9F3 1711 aa37.45■■■■□ 3.59
LDLRAD4-218ENST00000592991 PKD2Q13563 968 aa37.44■■■■□ 3.58
LDLRAD4-218ENST00000592991 SIN3AQ96ST3 1273 aa37.44■■■■□ 3.58
LDLRAD4-218ENST00000592991 SIGLEC1Q9BZZ2 1709 aa37.44■■■■□ 3.58
LDLRAD4-218ENST00000592991 PRDM15P57071 1507 aaPredicted RBP37.44■■■■□ 3.58
LDLRAD4-218ENST00000592991 REREQ9P2R6 1566 aa37.39■■■■□ 3.58
LDLRAD4-218ENST00000592991 VWDEQ8N2E2 1590 aa37.39■■■■□ 3.58
LDLRAD4-218ENST00000592991 GGT6Q6P531 493 aa37.36■■■■□ 3.57
LDLRAD4-218ENST00000592991 NEUROD1Q13562 356 aa37.36■■■■□ 3.57
LDLRAD4-218ENST00000592991 KANK1Q14678 1352 aa37.34■■■■□ 3.57
LDLRAD4-218ENST00000592991 CEP152O94986 1710 aa37.34■■■■□ 3.57
LDLRAD4-218ENST00000592991 ANKRD30BQ9BXX2 1392 aa37.33■■■■□ 3.57
LDLRAD4-218ENST00000592991 TET3O43151 1660 aa37.29■■■■□ 3.56
LDLRAD4-218ENST00000592991 AGLP35573 1532 aa37.28■■■■□ 3.56
LDLRAD4-218ENST00000592991 E9PCH4 1651 aa37.27■■■■□ 3.56
LDLRAD4-218ENST00000592991 ABCC3O15438 1527 aa37.22■■■■□ 3.55
LDLRAD4-218ENST00000592991 LMTK2Q8IWU2 1503 aa37.2■■■■□ 3.55
LDLRAD4-218ENST00000592991 EFCAB6Q5THR3 1501 aa37.19■■■■□ 3.54
LDLRAD4-218ENST00000592991 MLECQ14165 292 aa37.17■■■■□ 3.54
LDLRAD4-218ENST00000592991 WASHC2CQ9Y4E1 1318 aa37.16■■■■□ 3.54
LDLRAD4-218ENST00000592991 PLA2R1Q13018 1463 aa37.15■■■■□ 3.54
LDLRAD4-218ENST00000592991 CAMSAP1Q5T5Y3 1602 aa37.14■■■■□ 3.54
LDLRAD4-218ENST00000592991 ZC3H13Q5T200 1668 aaKnown RBP37.12■■■■□ 3.53
LDLRAD4-218ENST00000592991 ARID4BQ4LE39 1312 aaPredicted RBP37.12■■■■□ 3.53
LDLRAD4-218ENST00000592991 RPRD2Q5VT52 1461 aaKnown RBP37.12■■■■□ 3.53
LDLRAD4-218ENST00000592991 SPHKAPQ2M3C7 1700 aa37.09■■■■□ 3.53
LDLRAD4-218ENST00000592991 TONSLQ96HA7 1378 aa37.07■■■■□ 3.52
LDLRAD4-218ENST00000592991 CFAP65Q6ZU64 1925 aaKnown RBP37.06■■■■□ 3.52
LDLRAD4-218ENST00000592991 NPATQ14207 1427 aa37.06■■■■□ 3.52
LDLRAD4-218ENST00000592991 CLTCQ00610 1675 aaKnown RBP37.05■■■■□ 3.52
LDLRAD4-218ENST00000592991 TRPM2O94759 1503 aa37.01■■■■□ 3.52
LDLRAD4-218ENST00000592991 CCDC144AA2RUR9 1427 aa37.01■■■■□ 3.52
LDLRAD4-218ENST00000592991 PTPRTO14522 1441 aa37■■■■□ 3.51
LDLRAD4-218ENST00000592991 CLTCL1P53675 1640 aa36.96■■■■□ 3.51
LDLRAD4-218ENST00000592991 UGGT1Q9NYU2 1555 aa36.95■■■■□ 3.51
LDLRAD4-218ENST00000592991 TIMELESSQ9UNS1 1208 aa36.94■■■■□ 3.5
LDLRAD4-218ENST00000592991 PPP6R1Q9UPN7 881 aa36.93■■■■□ 3.5
LDLRAD4-218ENST00000592991 ARHGAP31Q2M1Z3 1444 aa36.92■■■■□ 3.5
LDLRAD4-218ENST00000592991 L3MBTL2Q969R5 705 aa36.92■■■■□ 3.5
LDLRAD4-218ENST00000592991 PREX1Q8TCU6 1659 aa36.87■■■■□ 3.49
LDLRAD4-218ENST00000592991 SYNMO15061 1565 aa36.85■■■■□ 3.49
LDLRAD4-218ENST00000592991 PPP1R15AO75807 674 aaPredicted RBP36.85■■■■□ 3.49
LDLRAD4-218ENST00000592991 ESF1Q9H501 851 aaKnown RBP36.85■■■■□ 3.49
LDLRAD4-218ENST00000592991 NOS1P29475 1434 aa36.84■■■■□ 3.49
LDLRAD4-218ENST00000592991 CNTLNQ9NXG0 1405 aa36.82■■■■□ 3.49
LDLRAD4-218ENST00000592991 FBXO31Q5XUX0 539 aaPredicted RBP36.81■■■■□ 3.48
LDLRAD4-218ENST00000592991 FER1L4A9Z1Z3 1794 aa36.81■■■■□ 3.48
LDLRAD4-218ENST00000592991 RGL3Q3MIN7 710 aa36.78■■■■□ 3.48
LDLRAD4-218ENST00000592991 ERVK-7P63135 1459 aa36.78■■■■□ 3.48
LDLRAD4-218ENST00000592991 ZMYM3Q14202 1370 aa36.77■■■■□ 3.48
LDLRAD4-218ENST00000592991 SPATA31E1Q6ZUB1 1445 aa36.76■■■■□ 3.47
LDLRAD4-218ENST00000592991 KIF1BO60333 1816 aa36.74■■■■□ 3.47
LDLRAD4-218ENST00000592991 MROH2AA6NES4 1674 aa36.74■■■■□ 3.47
LDLRAD4-218ENST00000592991 PIK3C2BO00750 1634 aa36.73■■■■□ 3.47
LDLRAD4-218ENST00000592991 SPATA31D1Q6ZQQ2 1576 aa36.7■■■■□ 3.47
LDLRAD4-218ENST00000592991 MADDQ8WXG6 1647 aa36.7■■■■□ 3.47
LDLRAD4-218ENST00000592991 DCAF11Q8TEB1 546 aa36.67■■■■□ 3.46
LDLRAD4-218ENST00000592991 KDM2AQ9Y2K7 1162 aa36.67■■■■□ 3.46
LDLRAD4-218ENST00000592991 C3P01024 1663 aa36.66■■■■□ 3.46
LDLRAD4-218ENST00000592991 NBPF8Q3BBV2 869 aa36.66■■■■□ 3.46
LDLRAD4-218ENST00000592991 ADGRB3O60242 1522 aa36.65■■■■□ 3.46
LDLRAD4-218ENST00000592991 CHGAP10645 457 aaKnown RBP36.65■■■■□ 3.46
LDLRAD4-218ENST00000592991 RIMS1Q86UR5 1692 aaKnown RBP36.64■■■■□ 3.46
LDLRAD4-218ENST00000592991 CEBPAP49715 358 aaPredicted RBP36.63■■■■□ 3.45
LDLRAD4-218ENST00000592991 ZNF326Q5BKZ1 582 aaKnown RBP36.63■■■■□ 3.45
LDLRAD4-218ENST00000592991 ADAMTSL3P82987 1691 aa36.63■■■■□ 3.45
LDLRAD4-218ENST00000592991 IDI1Q13907 227 aa36.63■■■■□ 3.45
LDLRAD4-218ENST00000592991 PLPPR3Q6T4P5 718 aa36.63■■■■□ 3.45
LDLRAD4-218ENST00000592991 NEURL4Q96JN8 1562 aa36.6■■■■□ 3.45
LDLRAD4-218ENST00000592991 MYO5BQ9ULV0 1848 aa36.58■■■■□ 3.45
LDLRAD4-218ENST00000592991 SLC52A1Q9NWF4 448 aa36.57■■■■□ 3.44
LDLRAD4-218ENST00000592991 UHRF1BP1Q6BDS2 1440 aa36.53■■■■□ 3.44
LDLRAD4-218ENST00000592991 TNRQ92752 1358 aa36.53■■■■□ 3.44
LDLRAD4-218ENST00000592991 TMEM131LA2VDJ0 1609 aa36.52■■■■□ 3.44
LDLRAD4-218ENST00000592991 IFT172Q9UG01 1749 aa36.52■■■■□ 3.44
LDLRAD4-218ENST00000592991 PRAG1Q86YV5 1406 aa36.5■■■■□ 3.43
LDLRAD4-218ENST00000592991 PPLO60437 1756 aa36.46■■■■□ 3.43
LDLRAD4-218ENST00000592991 TRPM1Q7Z4N2 1603 aa36.41■■■■□ 3.42
LDLRAD4-218ENST00000592991 NEXMIFQ5QGS0 1516 aa36.41■■■■□ 3.42
LDLRAD4-218ENST00000592991 RALGAPBQ86X10 1494 aa36.41■■■■□ 3.42
LDLRAD4-218ENST00000592991 STAG3Q9UJ98 1225 aa36.4■■■■□ 3.42
LDLRAD4-218ENST00000592991 MYOM2P54296 1465 aa36.39■■■■□ 3.42
LDLRAD4-218ENST00000592991 A2ML1A8K2U0 1454 aa36.38■■■■□ 3.41
LDLRAD4-218ENST00000592991 NUTM2DQ5VT03 806 aaPredicted RBP36.37■■■■□ 3.41
LDLRAD4-218ENST00000592991 ADGRF5Q8IZF2 1346 aa36.37■■■■□ 3.41
LDLRAD4-218ENST00000592991 ZNF316A6NFI3 1004 aaPredicted RBP36.34■■■■□ 3.41
LDLRAD4-218ENST00000592991 RPGRIP1LQ68CZ1 1315 aa36.33■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms