RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 FOXD1Q16676 465 aa22.88■■□□□ 1.25
TCF3-217ENST00000592628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.88■■□□□ 1.25
TCF3-217ENST00000592628 DIP2CQ9Y2E4 1556 aa22.87■■□□□ 1.25
TCF3-217ENST00000592628 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
TCF3-217ENST00000592628 MAGI2Q86UL8 1455 aa22.86■■□□□ 1.25
TCF3-217ENST00000592628 YEATS2Q9ULM3 1422 aa22.86■■□□□ 1.25
TCF3-217ENST00000592628 FAM135AQ9P2D6 1515 aa22.85■■□□□ 1.25
TCF3-217ENST00000592628 KIF3BO15066 747 aa22.85■■□□□ 1.25
TCF3-217ENST00000592628 DEPDC5O75140 1603 aa22.84■■□□□ 1.25
TCF3-217ENST00000592628 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
TCF3-217ENST00000592628 PKD2Q13563 968 aa22.84■■□□□ 1.25
TCF3-217ENST00000592628 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.25
TCF3-217ENST00000592628 ANKRD30BQ9BXX2 1392 aa22.8■■□□□ 1.24
TCF3-217ENST00000592628 MROH1Q8NDA8 1641 aa22.78■■□□□ 1.24
TCF3-217ENST00000592628 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
TCF3-217ENST00000592628 RNF17Q9BXT8 1623 aaKnown RBP22.76■■□□□ 1.23
TCF3-217ENST00000592628 ATP10AO60312 1499 aa22.76■■□□□ 1.23
TCF3-217ENST00000592628 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
TCF3-217ENST00000592628 VWDEQ8N2E2 1590 aa22.75■■□□□ 1.23
TCF3-217ENST00000592628 KANK1Q14678 1352 aa22.73■■□□□ 1.23
TCF3-217ENST00000592628 GGT6Q6P531 493 aa22.71■■□□□ 1.23
TCF3-217ENST00000592628 TIMELESSQ9UNS1 1208 aa22.71■■□□□ 1.23
TCF3-217ENST00000592628 REREQ9P2R6 1566 aa22.7■■□□□ 1.22
TCF3-217ENST00000592628 ARHGEF40Q8TER5 1519 aa22.69■■□□□ 1.22
TCF3-217ENST00000592628 TET3O43151 1660 aa22.68■■□□□ 1.22
TCF3-217ENST00000592628 E9PCH4 1651 aa22.67■■□□□ 1.22
TCF3-217ENST00000592628 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
TCF3-217ENST00000592628 CEP152O94986 1710 aa22.66■■□□□ 1.22
TCF3-217ENST00000592628 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
TCF3-217ENST00000592628 SIGLEC1Q9BZZ2 1709 aa22.65■■□□□ 1.22
TCF3-217ENST00000592628 AGLP35573 1532 aa22.64■■□□□ 1.21
TCF3-217ENST00000592628 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.21
TCF3-217ENST00000592628 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
TCF3-217ENST00000592628 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
TCF3-217ENST00000592628 ABCC3O15438 1527 aa22.6■■□□□ 1.21
TCF3-217ENST00000592628 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
TCF3-217ENST00000592628 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
TCF3-217ENST00000592628 SPHKAPQ2M3C7 1700 aa22.56■■□□□ 1.2
TCF3-217ENST00000592628 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
TCF3-217ENST00000592628 CCDC144AA2RUR9 1427 aa22.56■■□□□ 1.2
TCF3-217ENST00000592628 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
TCF3-217ENST00000592628 PTPRTO14522 1441 aa22.55■■□□□ 1.2
TCF3-217ENST00000592628 CAMSAP1Q5T5Y3 1602 aa22.55■■□□□ 1.2
TCF3-217ENST00000592628 CFAP65Q6ZU64 1925 aaKnown RBP22.54■■□□□ 1.2
TCF3-217ENST00000592628 TRPM2O94759 1503 aa22.52■■□□□ 1.2
TCF3-217ENST00000592628 NPATQ14207 1427 aa22.52■■□□□ 1.2
TCF3-217ENST00000592628 MLECQ14165 292 aa22.52■■□□□ 1.2
TCF3-217ENST00000592628 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
TCF3-217ENST00000592628 ARID4BQ4LE39 1312 aaPredicted RBP22.49■■□□□ 1.19
TCF3-217ENST00000592628 ARHGAP31Q2M1Z3 1444 aa22.48■■□□□ 1.19
TCF3-217ENST00000592628 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
TCF3-217ENST00000592628 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
TCF3-217ENST00000592628 UGGT1Q9NYU2 1555 aa22.43■■□□□ 1.18
TCF3-217ENST00000592628 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
TCF3-217ENST00000592628 NOS1P29475 1434 aa22.42■■□□□ 1.18
TCF3-217ENST00000592628 CNTLNQ9NXG0 1405 aa22.41■■□□□ 1.18
TCF3-217ENST00000592628 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
TCF3-217ENST00000592628 NBPF8Q3BBV2 869 aa22.4■■□□□ 1.18
TCF3-217ENST00000592628 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
TCF3-217ENST00000592628 PREX1Q8TCU6 1659 aa22.38■■□□□ 1.17
TCF3-217ENST00000592628 KIF1BO60333 1816 aa22.38■■□□□ 1.17
TCF3-217ENST00000592628 SYNMO15061 1565 aa22.38■■□□□ 1.17
TCF3-217ENST00000592628 ESF1Q9H501 851 aaKnown RBP22.38■■□□□ 1.17
TCF3-217ENST00000592628 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
TCF3-217ENST00000592628 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
TCF3-217ENST00000592628 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
TCF3-217ENST00000592628 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
TCF3-217ENST00000592628 PIK3C2BO00750 1634 aa22.34■■□□□ 1.17
TCF3-217ENST00000592628 NEURL4Q96JN8 1562 aa22.34■■□□□ 1.17
TCF3-217ENST00000592628 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
TCF3-217ENST00000592628 UHRF1BP1Q6BDS2 1440 aa22.33■■□□□ 1.16
TCF3-217ENST00000592628 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
TCF3-217ENST00000592628 MROH2AA6NES4 1674 aa22.31■■□□□ 1.16
TCF3-217ENST00000592628 IDI1Q13907 227 aa22.29■■□□□ 1.16
TCF3-217ENST00000592628 SLC52A1Q9NWF4 448 aa22.29■■□□□ 1.16
TCF3-217ENST00000592628 ADGRB3O60242 1522 aa22.29■■□□□ 1.16
TCF3-217ENST00000592628 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
TCF3-217ENST00000592628 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
TCF3-217ENST00000592628 FER1L4A9Z1Z3 1794 aa22.28■■□□□ 1.16
TCF3-217ENST00000592628 PRAG1Q86YV5 1406 aa22.26■■□□□ 1.15
TCF3-217ENST00000592628 IFT172Q9UG01 1749 aa22.23■■□□□ 1.15
TCF3-217ENST00000592628 STAC3Q96MF2 364 aa22.22■■□□□ 1.15
TCF3-217ENST00000592628 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
TCF3-217ENST00000592628 MYO5BQ9ULV0 1848 aa22.21■■□□□ 1.15
TCF3-217ENST00000592628 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
TCF3-217ENST00000592628 C3P01024 1663 aa22.2■■□□□ 1.15
TCF3-217ENST00000592628 CEBPAP49715 358 aaPredicted RBP22.2■■□□□ 1.14
TCF3-217ENST00000592628 TMEM131LA2VDJ0 1609 aa22.2■■□□□ 1.14
TCF3-217ENST00000592628 HIRIP3Q9BW71 556 aaPredicted RBP22.2■■□□□ 1.14
TCF3-217ENST00000592628 MADDQ8WXG6 1647 aa22.19■■□□□ 1.14
TCF3-217ENST00000592628 PPLO60437 1756 aa22.19■■□□□ 1.14
TCF3-217ENST00000592628 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
TCF3-217ENST00000592628 MYOM2P54296 1465 aa22.17■■□□□ 1.14
TCF3-217ENST00000592628 EIF4G2P78344 907 aaKnown RBP eCLIP22.17■■□□□ 1.14
TCF3-217ENST00000592628 TNRQ92752 1358 aa22.17■■□□□ 1.14
TCF3-217ENST00000592628 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
TCF3-217ENST00000592628 HSPA5P11021 654 aaKnown RBP22.16■■□□□ 1.14
TCF3-217ENST00000592628 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
TCF3-217ENST00000592628 RIMS1Q86UR5 1692 aaKnown RBP22.14■■□□□ 1.14
TCF3-217ENST00000592628 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms