RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
SAFB-213ENST00000592555 KANK1Q14678 1352 aa27.4■■□□□ 1.98
SAFB-213ENST00000592555 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
SAFB-213ENST00000592555 DEPDC5O75140 1603 aa27.39■■□□□ 1.98
SAFB-213ENST00000592555 GGT6Q6P531 493 aa27.37■■□□□ 1.97
SAFB-213ENST00000592555 PRDM15P57071 1507 aaPredicted RBP27.37■■□□□ 1.97
SAFB-213ENST00000592555 UNC13BO14795 1591 aa27.36■■□□□ 1.97
SAFB-213ENST00000592555 SIGLEC1Q9BZZ2 1709 aa27.35■■□□□ 1.97
SAFB-213ENST00000592555 KDM5DQ9BY66 1539 aa27.33■■□□□ 1.97
SAFB-213ENST00000592555 ESF1Q9H501 851 aaKnown RBP27.33■■□□□ 1.97
SAFB-213ENST00000592555 NUP155O75694 1391 aa27.32■■□□□ 1.96
SAFB-213ENST00000592555 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
SAFB-213ENST00000592555 MROH1Q8NDA8 1641 aa27.31■■□□□ 1.96
SAFB-213ENST00000592555 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
SAFB-213ENST00000592555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.962e-6■■□□□ 14
SAFB-213ENST00000592555 WASHC2CQ9Y4E1 1318 aa27.29■■□□□ 1.96
SAFB-213ENST00000592555 VWDEQ8N2E2 1590 aa27.29■■□□□ 1.96
SAFB-213ENST00000592555 MLECQ14165 292 aa27.29■■□□□ 1.96
SAFB-213ENST00000592555 ZC3H13Q5T200 1668 aaKnown RBP27.28■■□□□ 1.96
SAFB-213ENST00000592555 LMTK2Q8IWU2 1503 aa27.27■■□□□ 1.96
SAFB-213ENST00000592555 IQGAP3Q86VI3 1631 aa27.25■■□□□ 1.95
SAFB-213ENST00000592555 ABCC3O15438 1527 aa27.23■■□□□ 1.95
SAFB-213ENST00000592555 ADAMTSL3P82987 1691 aa27.22■■□□□ 1.95
SAFB-213ENST00000592555 ARHGAP31Q2M1Z3 1444 aa27.19■■□□□ 1.94
SAFB-213ENST00000592555 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
SAFB-213ENST00000592555 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
SAFB-213ENST00000592555 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
SAFB-213ENST00000592555 TET3O43151 1660 aa27.17■■□□□ 1.94
SAFB-213ENST00000592555 PZPP20742 1482 aa27.16■■□□□ 1.94
SAFB-213ENST00000592555 RPRD2Q5VT52 1461 aaKnown RBP27.16■■□□□ 1.94
SAFB-213ENST00000592555 FER1L4A9Z1Z3 1794 aa27.16■■□□□ 1.94
SAFB-213ENST00000592555 ZMYM3Q14202 1370 aa27.15■■□□□ 1.94
SAFB-213ENST00000592555 EFCAB6Q5THR3 1501 aa27.13■■□□□ 1.93
SAFB-213ENST00000592555 CLTCQ00610 1675 aaKnown RBP27.13■■□□□ 1.93
SAFB-213ENST00000592555 MADDQ8WXG6 1647 aa27.12■■□□□ 1.93
SAFB-213ENST00000592555 CAMSAP1Q5T5Y3 1602 aa27.12■■□□□ 1.93
SAFB-213ENST00000592555 CEP152O94986 1710 aa27.11■■□□□ 1.93
SAFB-213ENST00000592555 PKD2Q13563 968 aa27.09■■□□□ 1.93
SAFB-213ENST00000592555 NPATQ14207 1427 aa27.07■■□□□ 1.92
SAFB-213ENST00000592555 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
SAFB-213ENST00000592555 KDM4FA0A1W2PPD8 638 aa27.04■■□□□ 1.92
SAFB-213ENST00000592555 PTPRMP28827 1452 aa27.03■■□□□ 1.92
SAFB-213ENST00000592555 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
SAFB-213ENST00000592555 E9PCH4 1651 aa27.02■■□□□ 1.92
SAFB-213ENST00000592555 PTPRTO14522 1441 aa27■■□□□ 1.91
SAFB-213ENST00000592555 C3P01024 1663 aa26.99■■□□□ 1.91
SAFB-213ENST00000592555 NOS1P29475 1434 aa26.99■■□□□ 1.91
SAFB-213ENST00000592555 SPATA31D1Q6ZQQ2 1576 aa26.98■■□□□ 1.91
SAFB-213ENST00000592555 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
SAFB-213ENST00000592555 ERVK-7P63135 1459 aa26.97■■□□□ 1.91
SAFB-213ENST00000592555 SLC52A1Q9NWF4 448 aa26.95■■□□□ 1.9
SAFB-213ENST00000592555 PREX1Q8TCU6 1659 aa26.94■■□□□ 1.9
SAFB-213ENST00000592555 CEBPAP49715 358 aaPredicted RBP26.94■■□□□ 1.9
SAFB-213ENST00000592555 FBXO31Q5XUX0 539 aaPredicted RBP26.93■■□□□ 1.9
SAFB-213ENST00000592555 TNRQ92752 1358 aa26.92■■□□□ 1.9
SAFB-213ENST00000592555 ANKRD30BQ9BXX2 1392 aa26.92■■□□□ 1.9
SAFB-213ENST00000592555 TRPM2O94759 1503 aa26.92■■□□□ 1.9
SAFB-213ENST00000592555 SPHKAPQ2M3C7 1700 aa26.9■■□□□ 1.9
SAFB-213ENST00000592555 FOXD1Q16676 465 aa26.9■■□□□ 1.9
SAFB-213ENST00000592555 NLRP1Q9C000 1473 aa26.88■■□□□ 1.89
SAFB-213ENST00000592555 PLA2R1Q13018 1463 aa26.88■■□□□ 1.89
SAFB-213ENST00000592555 CCDC144AA2RUR9 1427 aa26.87■■□□□ 1.89
SAFB-213ENST00000592555 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
SAFB-213ENST00000592555 SETD1BQ9UPS6 1966 aaKnown RBP26.86■■□□□ 1.89
SAFB-213ENST00000592555 SYNMO15061 1565 aa26.84■■□□□ 1.89
SAFB-213ENST00000592555 PLPPR3Q6T4P5 718 aa26.82■■□□□ 1.88
SAFB-213ENST00000592555 PIK3C2BO00750 1634 aa26.81■■□□□ 1.88
SAFB-213ENST00000592555 CFAP65Q6ZU64 1925 aaKnown RBP26.81■■□□□ 1.88
SAFB-213ENST00000592555 IDI1Q13907 227 aa26.81■■□□□ 1.88
SAFB-213ENST00000592555 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
SAFB-213ENST00000592555 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
SAFB-213ENST00000592555 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
SAFB-213ENST00000592555 A2ML1A8K2U0 1454 aa26.76■■□□□ 1.87
SAFB-213ENST00000592555 CLTCL1P53675 1640 aa26.75■■□□□ 1.87
SAFB-213ENST00000592555 MYO3AQ8NEV4 1616 aa26.74■■□□□ 1.87
SAFB-213ENST00000592555 STAG3Q9UJ98 1225 aa26.74■■□□□ 1.87
SAFB-213ENST00000592555 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
SAFB-213ENST00000592555 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
SAFB-213ENST00000592555 CEP170BQ9Y4F5 1589 aaPredicted RBP26.71■■□□□ 1.87
SAFB-213ENST00000592555 ZNF142P52746 1687 aaPredicted RBP26.7■■□□□ 1.87
SAFB-213ENST00000592555 ADGRB3O60242 1522 aa26.7■■□□□ 1.86
SAFB-213ENST00000592555 KIF1BO60333 1816 aa26.69■■□□□ 1.86
SAFB-213ENST00000592555 TIMELESSQ9UNS1 1208 aa26.69■■□□□ 1.86
SAFB-213ENST00000592555 RPGRIP1LQ68CZ1 1315 aa26.68■■□□□ 1.86
SAFB-213ENST00000592555 HDGFP51858 240 aaKnown RBP26.68■■□□□ 1.86
SAFB-213ENST00000592555 STAC3Q96MF2 364 aa26.68■■□□□ 1.86
SAFB-213ENST00000592555 SPATA31E1Q6ZUB1 1445 aa26.67■■□□□ 1.86
SAFB-213ENST00000592555 CHGAP10645 457 aaKnown RBP26.67■■□□□ 1.86
SAFB-213ENST00000592555 TMEM131LA2VDJ0 1609 aa26.66■■□□□ 1.86
SAFB-213ENST00000592555 SIN3AQ96ST3 1273 aa26.66■■□□□ 1.86
SAFB-213ENST00000592555 UBR1Q8IWV7 1749 aa26.63■■□□□ 1.85
SAFB-213ENST00000592555 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
SAFB-213ENST00000592555 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.61■■□□□ 1.85
SAFB-213ENST00000592555 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
SAFB-213ENST00000592555 AEBP2Q6ZN18 517 aaPredicted RBP26.6■■□□□ 1.85
SAFB-213ENST00000592555 TMEM2Q9UHN6 1383 aa26.59■■□□□ 1.85
SAFB-213ENST00000592555 TONSLQ96HA7 1378 aa26.59■■□□□ 1.85
SAFB-213ENST00000592555 SLIT1O75093 1534 aa26.58■■□□□ 1.85
SAFB-213ENST00000592555 LMTK3Q96Q04 1460 aa26.58■■□□□ 1.85
SAFB-213ENST00000592555 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms