RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 RNF17Q9BXT8 1623 aaKnown RBP31.51■■■□□ 2.63
CIRBP-239ENST00000592467 EIF2AK4Q9P2K8 1649 aaKnown RBP31.5■■■□□ 2.63
CIRBP-239ENST00000592467 DAPK1P53355 1430 aa31.49■■■□□ 2.63
CIRBP-239ENST00000592467 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
CIRBP-239ENST00000592467 MROH1Q8NDA8 1641 aa31.46■■■□□ 2.63
CIRBP-239ENST00000592467 MYO3AQ8NEV4 1616 aa31.45■■■□□ 2.62
CIRBP-239ENST00000592467 DUOX2Q9NRD8 1548 aa31.44■■■□□ 2.62
CIRBP-239ENST00000592467 ZNF142P52746 1687 aaPredicted RBP31.43■■■□□ 2.62
CIRBP-239ENST00000592467 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
CIRBP-239ENST00000592467 PZPP20742 1482 aa31.39■■■□□ 2.62
CIRBP-239ENST00000592467 ABCC3O15438 1527 aa31.37■■■□□ 2.61
CIRBP-239ENST00000592467 ZC3H13Q5T200 1668 aaKnown RBP31.37■■■□□ 2.61
CIRBP-239ENST00000592467 WASHC2CQ9Y4E1 1318 aa31.36■■■□□ 2.61
CIRBP-239ENST00000592467 CEP170BQ9Y4F5 1589 aaPredicted RBP31.35■■■□□ 2.61
CIRBP-239ENST00000592467 NCOA1Q15788 1441 aa31.34■■■□□ 2.61
CIRBP-239ENST00000592467 ERBINQ96RT1 1412 aa31.34■■■□□ 2.61
CIRBP-239ENST00000592467 ILDR1Q86SU0 546 aaPredicted RBP31.33■■■□□ 2.61
CIRBP-239ENST00000592467 RRP7BPQ9NSQ0 103 aa31.33■■■□□ 2.61
CIRBP-239ENST00000592467 CAMSAP1Q5T5Y3 1602 aa31.32■■■□□ 2.6
CIRBP-239ENST00000592467 FBXO31Q5XUX0 539 aaPredicted RBP31.32■■■□□ 2.6
CIRBP-239ENST00000592467 ADGRL2O95490 1459 aa31.32■■■□□ 2.6
CIRBP-239ENST00000592467 CEP152O94986 1710 aa31.31■■■□□ 2.6
CIRBP-239ENST00000592467 DEPDC5O75140 1603 aa31.31■■■□□ 2.6
CIRBP-239ENST00000592467 PRDM15P57071 1507 aaPredicted RBP31.3■■■□□ 2.6
CIRBP-239ENST00000592467 CHIC2Q9UKJ5 165 aa31.28■■■□□ 2.6
CIRBP-239ENST00000592467 ANKRD30AQ9BXX3 1397 aa31.28■■■□□ 2.6
CIRBP-239ENST00000592467 A2ML1A8K2U0 1454 aa31.27■■■□□ 2.6
CIRBP-239ENST00000592467 PTPRTO14522 1441 aa31.26■■■□□ 2.6
CIRBP-239ENST00000592467 TNRQ92752 1358 aa31.26■■■□□ 2.59
CIRBP-239ENST00000592467 FAM50AQ14320 339 aaKnown RBP31.25■■■□□ 2.59
CIRBP-239ENST00000592467 SPATA31D1Q6ZQQ2 1576 aa31.23■■■□□ 2.59
CIRBP-239ENST00000592467 PLA2R1Q13018 1463 aa31.23■■■□□ 2.59
CIRBP-239ENST00000592467 DMRT2Q9Y5R5 561 aa31.23■■■□□ 2.59
CIRBP-239ENST00000592467 VWDEQ8N2E2 1590 aa31.19■■■□□ 2.58
CIRBP-239ENST00000592467 PPARGC1BQ86YN6 1023 aaKnown RBP31.19■■■□□ 2.58
CIRBP-239ENST00000592467 ERVK-7P63135 1459 aa31.17■■■□□ 2.58
CIRBP-239ENST00000592467 ARHGAP31Q2M1Z3 1444 aa31.15■■■□□ 2.58
CIRBP-239ENST00000592467 NLRP1Q9C000 1473 aa31.15■■■□□ 2.58
CIRBP-239ENST00000592467 NCKAP5LQ9HCH0 1330 aa31.15■■■□□ 2.58
CIRBP-239ENST00000592467 CFAP65Q6ZU64 1925 aaKnown RBP31.14■■■□□ 2.57
CIRBP-239ENST00000592467 LMTK2Q8IWU2 1503 aa31.13■■■□□ 2.57
CIRBP-239ENST00000592467 FBXO41Q8TF61 875 aa31.11■■■□□ 2.57
CIRBP-239ENST00000592467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.11■■■□□ 2.57
CIRBP-239ENST00000592467 PKD2Q13563 968 aa31.09■■■□□ 2.57
CIRBP-239ENST00000592467 CERKQ8TCT0 537 aa31.09■■■□□ 2.57
CIRBP-239ENST00000592467 ANKRD50Q9ULJ7 1429 aa31.08■■■□□ 2.57
CIRBP-239ENST00000592467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.08■■■□□ 2.57
CIRBP-239ENST00000592467 LTBP4Q8N2S1 1624 aa31.08■■■□□ 2.57
CIRBP-239ENST00000592467 POLR1AO95602 1720 aaPredicted RBP31.07■■■□□ 2.56
CIRBP-239ENST00000592467 NEURL4Q96JN8 1562 aa31.07■■■□□ 2.56
CIRBP-239ENST00000592467 UGGT1Q9NYU2 1555 aa31.07■■■□□ 2.56
CIRBP-239ENST00000592467 ROCK1Q13464 1354 aa31.06■■■□□ 2.56
CIRBP-239ENST00000592467 KANK1Q14678 1352 aa31.04■■■□□ 2.56
CIRBP-239ENST00000592467 UBR1Q8IWV7 1749 aa31.01■■■□□ 2.56
CIRBP-239ENST00000592467 EFCAB6Q5THR3 1501 aa31.01■■■□□ 2.55
CIRBP-239ENST00000592467 RRBP1Q9P2E9 1410 aaKnown RBP31■■■□□ 2.55
CIRBP-239ENST00000592467 UNC13BO14795 1591 aa31■■■□□ 2.55
CIRBP-239ENST00000592467 THEMISQ8N1K5 641 aaPredicted RBP30.98■■■□□ 2.55
CIRBP-239ENST00000592467 SYNMO15061 1565 aa30.95■■■□□ 2.54
CIRBP-239ENST00000592467 NOS1P29475 1434 aa30.93■■■□□ 2.54
CIRBP-239ENST00000592467 PIK3C2BO00750 1634 aa30.93■■■□□ 2.54
CIRBP-239ENST00000592467 MED14O60244 1454 aa30.93■■■□□ 2.54
CIRBP-239ENST00000592467 TET3O43151 1660 aa30.92■■■□□ 2.54
CIRBP-239ENST00000592467 ZNF335Q9H4Z2 1342 aaPredicted RBP30.92■■■□□ 2.54
CIRBP-239ENST00000592467 ITGAEP38570 1179 aa30.9■■■□□ 2.54
CIRBP-239ENST00000592467 ANKLE2Q86XL3 938 aa30.9■■■□□ 2.54
CIRBP-239ENST00000592467 GCC2Q8IWJ2 1684 aa30.89■■■□□ 2.54
CIRBP-239ENST00000592467 ARHGAP23Q9P227 1491 aa30.88■■■□□ 2.53
CIRBP-239ENST00000592467 KDM5AP29375 1690 aaKnown RBP30.87■■■□□ 2.53
CIRBP-239ENST00000592467 RPRD2Q5VT52 1461 aaKnown RBP30.87■■■□□ 2.53
CIRBP-239ENST00000592467 SLIT1O75093 1534 aa30.87■■■□□ 2.53
CIRBP-239ENST00000592467 IQGAP3Q86VI3 1631 aa30.87■■■□□ 2.53
CIRBP-239ENST00000592467 IQSEC2Q5JU85 1478 aa30.86■■■□□ 2.53
CIRBP-239ENST00000592467 IQGAP1P46940 1657 aa30.85■■■□□ 2.53
CIRBP-239ENST00000592467 NPHP4O75161 1426 aaPredicted RBP30.85■■■□□ 2.53
CIRBP-239ENST00000592467 E9PCH4 1651 aa30.82■■■□□ 2.52
CIRBP-239ENST00000592467 IDI1Q13907 227 aa30.82■■■□□ 2.52
CIRBP-239ENST00000592467 SCAF11Q99590 1463 aaKnown RBP30.78■■■□□ 2.52
CIRBP-239ENST00000592467 LTKP29376 864 aa30.77■■■□□ 2.52
CIRBP-239ENST00000592467 ADGRB3O60242 1522 aa30.76■■■□□ 2.51
CIRBP-239ENST00000592467 TMEM2Q9UHN6 1383 aa30.75■■■□□ 2.51
CIRBP-239ENST00000592467 NAIPQ13075 1403 aa30.74■■■□□ 2.51
CIRBP-239ENST00000592467 NUP155O75694 1391 aa30.73■■■□□ 2.51
CIRBP-239ENST00000592467 STRCP1A6NGW2 1772 aa30.72■■■□□ 2.51
CIRBP-239ENST00000592467 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
CIRBP-239ENST00000592467 MYO5BQ9ULV0 1848 aa30.71■■■□□ 2.51
CIRBP-239ENST00000592467 CPS1P31327 1500 aa30.71■■■□□ 2.51
CIRBP-239ENST00000592467 TXNDC2Q86VQ3 553 aa30.69■■■□□ 2.5
CIRBP-239ENST00000592467 TMEM131LA2VDJ0 1609 aa30.68■■■□□ 2.5
CIRBP-239ENST00000592467 HFM1A2PYH4 1435 aa30.64■■■□□ 2.5
CIRBP-239ENST00000592467 STAG3Q9UJ98 1225 aa30.64■■■□□ 2.5
CIRBP-239ENST00000592467 EID1Q9Y6B2 187 aa30.62■■■□□ 2.49
CIRBP-239ENST00000592467 ZFYVE9O95405 1425 aa30.61■■■□□ 2.49
CIRBP-239ENST00000592467 SPHKAPQ2M3C7 1700 aa30.59■■■□□ 2.49
CIRBP-239ENST00000592467 LRRC7Q96NW7 1537 aa30.55■■■□□ 2.48
CIRBP-239ENST00000592467 ALKQ9UM73 1620 aa30.52■■■□□ 2.48
CIRBP-239ENST00000592467 RIMS2Q9UQ26 1411 aa30.51■■■□□ 2.47
CIRBP-239ENST00000592467 UBAP1LF5GYI3 381 aa30.5■■■□□ 2.47
CIRBP-239ENST00000592467 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
CIRBP-239ENST00000592467 PLEKHG1Q9ULL1 1385 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms