RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 TCOF1Q13428 1488 aaKnown RBP15.07■□□□□ 0
PRKCSH-215ENST00000592435 KDM5DQ9BY66 1539 aa15.07■□□□□ 0
PRKCSH-215ENST00000592435 PTPN23Q9H3S7 1636 aa15.06■□□□□ 0
PRKCSH-215ENST00000592435 FBXO31Q5XUX0 539 aaPredicted RBP15.06■□□□□ 0
PRKCSH-215ENST00000592435 NCOA1Q15788 1441 aa15.06■□□□□ 0
PRKCSH-215ENST00000592435 CERKQ8TCT0 537 aa15.05■□□□□ -0
PRKCSH-215ENST00000592435 RRP7BPQ9NSQ0 103 aa15.05■□□□□ -0
PRKCSH-215ENST00000592435 SHANK2Q9UPX8 1470 aa15.05■□□□□ -0
PRKCSH-215ENST00000592435 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
PRKCSH-215ENST00000592435 PZPP20742 1482 aa15.04■□□□□ -0
PRKCSH-215ENST00000592435 DAPK1P53355 1430 aa15.04■□□□□ -0
PRKCSH-215ENST00000592435 KIF15Q9NS87 1388 aa15.04■□□□□ -0
PRKCSH-215ENST00000592435 TNRQ92752 1358 aa15.02■□□□□ -0
PRKCSH-215ENST00000592435 PKD2Q13563 968 aa15.02■□□□□ -0
PRKCSH-215ENST00000592435 CAMSAP1Q5T5Y3 1602 aa15.02□□□□□ -0.01
PRKCSH-215ENST00000592435 RNF17Q9BXT8 1623 aaKnown RBP15.02□□□□□ -0.01
PRKCSH-215ENST00000592435 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02□□□□□ -0.01
PRKCSH-215ENST00000592435 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
PRKCSH-215ENST00000592435 DNMT1P26358 1616 aaKnown RBP15.01□□□□□ -0.01
PRKCSH-215ENST00000592435 CEP170BQ9Y4F5 1589 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-215ENST00000592435 A2ML1A8K2U0 1454 aa15.01□□□□□ -0.01
PRKCSH-215ENST00000592435 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
PRKCSH-215ENST00000592435 ERBINQ96RT1 1412 aa15□□□□□ -0.01
PRKCSH-215ENST00000592435 ANKRD30AQ9BXX3 1397 aa15□□□□□ -0.01
PRKCSH-215ENST00000592435 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
PRKCSH-215ENST00000592435 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
PRKCSH-215ENST00000592435 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
PRKCSH-215ENST00000592435 ABCC3O15438 1527 aa14.99□□□□□ -0.01
PRKCSH-215ENST00000592435 FAM50AQ14320 339 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-215ENST00000592435 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
PRKCSH-215ENST00000592435 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
PRKCSH-215ENST00000592435 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
PRKCSH-215ENST00000592435 MROH1Q8NDA8 1641 aa14.96□□□□□ -0.01
PRKCSH-215ENST00000592435 ZC3H13Q5T200 1668 aaKnown RBP14.96□□□□□ -0.01
PRKCSH-215ENST00000592435 ADGRL2O95490 1459 aa14.95□□□□□ -0.02
PRKCSH-215ENST00000592435 ARHGAP31Q2M1Z3 1444 aa14.94□□□□□ -0.02
PRKCSH-215ENST00000592435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRKCSH-215ENST00000592435 KANK1Q14678 1352 aa14.94□□□□□ -0.02
PRKCSH-215ENST00000592435 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-215ENST00000592435 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
PRKCSH-215ENST00000592435 ERVK-7P63135 1459 aa14.92□□□□□ -0.02
PRKCSH-215ENST00000592435 SPATA31D1Q6ZQQ2 1576 aa14.92□□□□□ -0.02
PRKCSH-215ENST00000592435 UGGT1Q9NYU2 1555 aa14.91□□□□□ -0.02
PRKCSH-215ENST00000592435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRKCSH-215ENST00000592435 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
PRKCSH-215ENST00000592435 DEPDC5O75140 1603 aa14.9□□□□□ -0.02
PRKCSH-215ENST00000592435 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
PRKCSH-215ENST00000592435 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
PRKCSH-215ENST00000592435 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-215ENST00000592435 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
PRKCSH-215ENST00000592435 CEP152O94986 1710 aa14.87□□□□□ -0.03
PRKCSH-215ENST00000592435 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
PRKCSH-215ENST00000592435 ROCK1Q13464 1354 aa14.86□□□□□ -0.03
PRKCSH-215ENST00000592435 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
PRKCSH-215ENST00000592435 MED14O60244 1454 aa14.85□□□□□ -0.03
PRKCSH-215ENST00000592435 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
PRKCSH-215ENST00000592435 IDI1Q13907 227 aa14.83□□□□□ -0.04
PRKCSH-215ENST00000592435 NPHP4O75161 1426 aaPredicted RBP14.83□□□□□ -0.04
PRKCSH-215ENST00000592435 POLR1AO95602 1720 aaPredicted RBP14.81□□□□□ -0.04
PRKCSH-215ENST00000592435 ITGAEP38570 1179 aa14.81□□□□□ -0.04
PRKCSH-215ENST00000592435 SLC52A1Q9NWF4 448 aa14.81□□□□□ -0.04
PRKCSH-215ENST00000592435 TXNDC2Q86VQ3 553 aa14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 EID1Q9Y6B2 187 aa14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 NOS1P29475 1434 aa14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 RPRD2Q5VT52 1461 aaKnown RBP14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 EFCAB6Q5THR3 1501 aa14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 CFAP65Q6ZU64 1925 aaKnown RBP14.8□□□□□ -0.04
PRKCSH-215ENST00000592435 LTKP29376 864 aa14.79□□□□□ -0.04
PRKCSH-215ENST00000592435 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
PRKCSH-215ENST00000592435 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
PRKCSH-215ENST00000592435 SLIT1O75093 1534 aa14.78□□□□□ -0.04
PRKCSH-215ENST00000592435 CPS1P31327 1500 aa14.77□□□□□ -0.04
PRKCSH-215ENST00000592435 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
PRKCSH-215ENST00000592435 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.04
PRKCSH-215ENST00000592435 RRBP1Q9P2E9 1410 aaKnown RBP14.76□□□□□ -0.05
PRKCSH-215ENST00000592435 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
PRKCSH-215ENST00000592435 SYNMO15061 1565 aa14.75□□□□□ -0.05
PRKCSH-215ENST00000592435 KDM5AP29375 1690 aaKnown RBP14.74□□□□□ -0.05
PRKCSH-215ENST00000592435 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
PRKCSH-215ENST00000592435 NUP155O75694 1391 aa14.74□□□□□ -0.05
PRKCSH-215ENST00000592435 PIK3C2BO00750 1634 aa14.74□□□□□ -0.05
PRKCSH-215ENST00000592435 UNC13BO14795 1591 aa14.74□□□□□ -0.05
PRKCSH-215ENST00000592435 TET3O43151 1660 aa14.73□□□□□ -0.05
PRKCSH-215ENST00000592435 TOM1O60784 492 aa14.72□□□□□ -0.05
PRKCSH-215ENST00000592435 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
PRKCSH-215ENST00000592435 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
PRKCSH-215ENST00000592435 ADGRB3O60242 1522 aa14.69□□□□□ -0.06
PRKCSH-215ENST00000592435 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
PRKCSH-215ENST00000592435 NAIPQ13075 1403 aa14.66□□□□□ -0.06
PRKCSH-215ENST00000592435 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
PRKCSH-215ENST00000592435 E9PCH4 1651 aa14.66□□□□□ -0.06
PRKCSH-215ENST00000592435 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRKCSH-215ENST00000592435 SLC26A8Q96RN1 970 aa14.66□□□□□ -0.06
PRKCSH-215ENST00000592435 KCNA6P17658 529 aa14.65□□□□□ -0.06
PRKCSH-215ENST00000592435 ZFYVE9O95405 1425 aa14.65□□□□□ -0.06
PRKCSH-215ENST00000592435 CHGAP10645 457 aaKnown RBP14.64□□□□□ -0.07
PRKCSH-215ENST00000592435 PIP4K2BP78356 416 aa14.64□□□□□ -0.07
PRKCSH-215ENST00000592435 BCANQ96GW7 911 aa14.64□□□□□ -0.07
PRKCSH-215ENST00000592435 RIMS2Q9UQ26 1411 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms