RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
DDX39A-217ENST00000592391 EIF2AK4Q9P2K8 1649 aaKnown RBP22.34■■□□□ 1.17
DDX39A-217ENST00000592391 PREX1Q8TCU6 1659 aa22.33■■□□□ 1.16
DDX39A-217ENST00000592391 NPATQ14207 1427 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 KDM5DQ9BY66 1539 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 RNF17Q9BXT8 1623 aaKnown RBP22.31■■□□□ 1.16
DDX39A-217ENST00000592391 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
DDX39A-217ENST00000592391 SETD1BQ9UPS6 1966 aaKnown RBP22.3■■□□□ 1.16
DDX39A-217ENST00000592391 WASHC2CQ9Y4E1 1318 aa22.3■■□□□ 1.16
DDX39A-217ENST00000592391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.28■■□□□ 1.16
DDX39A-217ENST00000592391 HSPA2P54652 639 aa22.28■■□□□ 1.16
DDX39A-217ENST00000592391 PTPRKQ15262 1439 aa22.27■■□□□ 1.16
DDX39A-217ENST00000592391 MROH1Q8NDA8 1641 aa22.26■■□□□ 1.15
DDX39A-217ENST00000592391 ABCC3O15438 1527 aa22.23■■□□□ 1.15
DDX39A-217ENST00000592391 PZPP20742 1482 aa22.22■■□□□ 1.15
DDX39A-217ENST00000592391 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
DDX39A-217ENST00000592391 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
DDX39A-217ENST00000592391 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
DDX39A-217ENST00000592391 ROCK1Q13464 1354 aa22.2■■□□□ 1.14
DDX39A-217ENST00000592391 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
DDX39A-217ENST00000592391 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
DDX39A-217ENST00000592391 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-217ENST00000592391 ITGAEP38570 1179 aa22.17■■□□□ 1.14
DDX39A-217ENST00000592391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.16■■□□□ 1.149e-7■■■□□ 16.9
DDX39A-217ENST00000592391 MYO3AQ8NEV4 1616 aa22.16■■□□□ 1.14
DDX39A-217ENST00000592391 KANK1Q14678 1352 aa22.15■■□□□ 1.14
DDX39A-217ENST00000592391 TNRQ92752 1358 aa22.15■■□□□ 1.14
DDX39A-217ENST00000592391 CEP152O94986 1710 aa22.14■■□□□ 1.13
DDX39A-217ENST00000592391 ZNF142P52746 1687 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-217ENST00000592391 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
DDX39A-217ENST00000592391 CEP170BQ9Y4F5 1589 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-217ENST00000592391 ARHGAP31Q2M1Z3 1444 aa22.11■■□□□ 1.13
DDX39A-217ENST00000592391 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
DDX39A-217ENST00000592391 LMTK2Q8IWU2 1503 aa22.1■■□□□ 1.13
DDX39A-217ENST00000592391 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
DDX39A-217ENST00000592391 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
DDX39A-217ENST00000592391 ERVK-7P63135 1459 aa22.09■■□□□ 1.13
DDX39A-217ENST00000592391 STRCQ7RTU9 1775 aa22.07■■□□□ 1.12
DDX39A-217ENST00000592391 NLRP1Q9C000 1473 aa22.07■■□□□ 1.12
DDX39A-217ENST00000592391 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
DDX39A-217ENST00000592391 UNC13BO14795 1591 aa22.04■■□□□ 1.12
DDX39A-217ENST00000592391 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
DDX39A-217ENST00000592391 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
DDX39A-217ENST00000592391 PTPRTO14522 1441 aa22■■□□□ 1.11
DDX39A-217ENST00000592391 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
DDX39A-217ENST00000592391 PKD2Q13563 968 aa21.98■■□□□ 1.11
DDX39A-217ENST00000592391 THEMISQ8N1K5 641 aaPredicted RBP21.98■■□□□ 1.11
DDX39A-217ENST00000592391 NCKAP5LQ9HCH0 1330 aa21.98■■□□□ 1.11
DDX39A-217ENST00000592391 CFAP65Q6ZU64 1925 aaKnown RBP21.98■■□□□ 1.11
DDX39A-217ENST00000592391 NAIPQ13075 1403 aa21.97■■□□□ 1.11
DDX39A-217ENST00000592391 RPRD2Q5VT52 1461 aaKnown RBP21.96■■□□□ 1.11
DDX39A-217ENST00000592391 TET3O43151 1660 aa21.96■■□□□ 1.11
DDX39A-217ENST00000592391 NUP155O75694 1391 aa21.95■■□□□ 1.1
DDX39A-217ENST00000592391 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
DDX39A-217ENST00000592391 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
DDX39A-217ENST00000592391 NOS1P29475 1434 aa21.94■■□□□ 1.1
DDX39A-217ENST00000592391 GCC2Q8IWJ2 1684 aa21.92■■□□□ 1.1
DDX39A-217ENST00000592391 SYNMO15061 1565 aa21.91■■□□□ 1.1
DDX39A-217ENST00000592391 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.1
DDX39A-217ENST00000592391 ANKLE2Q86XL3 938 aa21.89■■□□□ 1.09
DDX39A-217ENST00000592391 IDI1Q13907 227 aa21.88■■□□□ 1.09
DDX39A-217ENST00000592391 POLR1AO95602 1720 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-217ENST00000592391 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
DDX39A-217ENST00000592391 PIK3C2BO00750 1634 aa21.87■■□□□ 1.09
DDX39A-217ENST00000592391 NEURL4Q96JN8 1562 aa21.87■■□□□ 1.09
DDX39A-217ENST00000592391 E9PCH4 1651 aa21.86■■□□□ 1.09
DDX39A-217ENST00000592391 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
DDX39A-217ENST00000592391 KDM5AP29375 1690 aaKnown RBP21.83■■□□□ 1.09
DDX39A-217ENST00000592391 MED14O60244 1454 aa21.83■■□□□ 1.08
DDX39A-217ENST00000592391 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
DDX39A-217ENST00000592391 SLIT1O75093 1534 aa21.82■■□□□ 1.08
DDX39A-217ENST00000592391 CERKQ8TCT0 537 aa21.82■■□□□ 1.08
DDX39A-217ENST00000592391 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-217ENST00000592391 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
DDX39A-217ENST00000592391 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
DDX39A-217ENST00000592391 SCAF11Q99590 1463 aaKnown RBP21.79■■□□□ 1.08
DDX39A-217ENST00000592391 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
DDX39A-217ENST00000592391 LTBP4Q8N2S1 1624 aa21.79■■□□□ 1.08
DDX39A-217ENST00000592391 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
DDX39A-217ENST00000592391 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-217ENST00000592391 LTKP29376 864 aa21.77■■□□□ 1.08
DDX39A-217ENST00000592391 ILDR1Q86SU0 546 aaPredicted RBP21.77■■□□□ 1.08
DDX39A-217ENST00000592391 EID1Q9Y6B2 187 aa21.77■■□□□ 1.08
DDX39A-217ENST00000592391 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
DDX39A-217ENST00000592391 IQGAP1P46940 1657 aa21.75■■□□□ 1.07
DDX39A-217ENST00000592391 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
DDX39A-217ENST00000592391 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
DDX39A-217ENST00000592391 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
DDX39A-217ENST00000592391 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
DDX39A-217ENST00000592391 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
DDX39A-217ENST00000592391 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
DDX39A-217ENST00000592391 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
DDX39A-217ENST00000592391 TRPM2O94759 1503 aa21.67■■□□□ 1.06
DDX39A-217ENST00000592391 IQSEC2Q5JU85 1478 aa21.67■■□□□ 1.06
DDX39A-217ENST00000592391 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
DDX39A-217ENST00000592391 RIMS2Q9UQ26 1411 aa21.66■■□□□ 1.06
DDX39A-217ENST00000592391 HDGFP51858 240 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms