RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 TROQ12816 1431 aaPredicted RBP12.06□□□□□ -0.48
SDF2-210ENST00000592250 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
SDF2-210ENST00000592250 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
SDF2-210ENST00000592250 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
SDF2-210ENST00000592250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
SDF2-210ENST00000592250 KIF14Q15058 1648 aa12.04□□□□□ -0.48
SDF2-210ENST00000592250 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
SDF2-210ENST00000592250 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
SDF2-210ENST00000592250 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
SDF2-210ENST00000592250 EHBP1L1Q8N3D4 1523 aa12.02□□□□□ -0.48
SDF2-210ENST00000592250 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
SDF2-210ENST00000592250 CD109Q6YHK3 1445 aa12.02□□□□□ -0.49
SDF2-210ENST00000592250 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
SDF2-210ENST00000592250 PHLDB1Q86UU1 1377 aa12.01□□□□□ -0.49
SDF2-210ENST00000592250 PKD2Q13563 968 aa12□□□□□ -0.49
SDF2-210ENST00000592250 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
SDF2-210ENST00000592250 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
SDF2-210ENST00000592250 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
SDF2-210ENST00000592250 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
SDF2-210ENST00000592250 TEX14Q8IWB6 1497 aa11.97□□□□□ -0.49
SDF2-210ENST00000592250 PLCH2O75038 1416 aa11.97□□□□□ -0.49
SDF2-210ENST00000592250 PSEN1P49768 467 aa11.97□□□□□ -0.49
SDF2-210ENST00000592250 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
SDF2-210ENST00000592250 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
SDF2-210ENST00000592250 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
SDF2-210ENST00000592250 ARAP3Q8WWN8 1544 aa11.96□□□□□ -0.49
SDF2-210ENST00000592250 C7P10643 843 aa11.96□□□□□ -0.49
SDF2-210ENST00000592250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.5
SDF2-210ENST00000592250 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
SDF2-210ENST00000592250 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
SDF2-210ENST00000592250 LHX8Q68G74 356 aa11.95□□□□□ -0.5
SDF2-210ENST00000592250 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
SDF2-210ENST00000592250 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
SDF2-210ENST00000592250 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
SDF2-210ENST00000592250 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
SDF2-210ENST00000592250 NEO1Q92859 1461 aa11.94□□□□□ -0.5
SDF2-210ENST00000592250 CDC42BPAQ5VT25 1732 aa11.93□□□□□ -0.5
SDF2-210ENST00000592250 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
SDF2-210ENST00000592250 FANCAO15360 1455 aa11.93□□□□□ -0.5
SDF2-210ENST00000592250 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
SDF2-210ENST00000592250 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
SDF2-210ENST00000592250 FGD6Q6ZV73 1430 aa11.92□□□□□ -0.5
SDF2-210ENST00000592250 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
SDF2-210ENST00000592250 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
SDF2-210ENST00000592250 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
SDF2-210ENST00000592250 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
SDF2-210ENST00000592250 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
SDF2-210ENST00000592250 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
SDF2-210ENST00000592250 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
SDF2-210ENST00000592250 MIA2Q96PC5 1412 aa11.89□□□□□ -0.51
SDF2-210ENST00000592250 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
SDF2-210ENST00000592250 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
SDF2-210ENST00000592250 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
SDF2-210ENST00000592250 RGL2O15211 777 aa11.87□□□□□ -0.51
SDF2-210ENST00000592250 IER5LQ5T953 404 aa11.87□□□□□ -0.51
SDF2-210ENST00000592250 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
SDF2-210ENST00000592250 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
SDF2-210ENST00000592250 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
SDF2-210ENST00000592250 ABCC1P33527 1531 aa11.86□□□□□ -0.51
SDF2-210ENST00000592250 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
SDF2-210ENST00000592250 RICTORQ6R327 1708 aa11.84□□□□□ -0.51
SDF2-210ENST00000592250 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
SDF2-210ENST00000592250 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
SDF2-210ENST00000592250 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
SDF2-210ENST00000592250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
SDF2-210ENST00000592250 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
SDF2-210ENST00000592250 RAPGEF3O95398 923 aa11.83□□□□□ -0.52
SDF2-210ENST00000592250 SEC24BO95487 1268 aa11.83□□□□□ -0.52
SDF2-210ENST00000592250 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
SDF2-210ENST00000592250 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
SDF2-210ENST00000592250 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
SDF2-210ENST00000592250 ARID4BQ4LE39 1312 aaPredicted RBP11.83□□□□□ -0.52
SDF2-210ENST00000592250 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
SDF2-210ENST00000592250 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
SDF2-210ENST00000592250 ZNF644Q9H582 1327 aaPredicted RBP11.82□□□□□ -0.52
SDF2-210ENST00000592250 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
SDF2-210ENST00000592250 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
SDF2-210ENST00000592250 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
SDF2-210ENST00000592250 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 ZMYM4Q5VZL5 1548 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
SDF2-210ENST00000592250 KDM5CP41229 1560 aa11.8□□□□□ -0.52
SDF2-210ENST00000592250 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
SDF2-210ENST00000592250 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
SDF2-210ENST00000592250 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
SDF2-210ENST00000592250 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
SDF2-210ENST00000592250 PTPRMP28827 1452 aa11.78□□□□□ -0.52
SDF2-210ENST00000592250 HNRNPMP52272 730 aaKnown RBP eCLIP11.78□□□□□ -0.52
SDF2-210ENST00000592250 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
SDF2-210ENST00000592250 MAGI2Q86UL8 1455 aa11.77□□□□□ -0.52
SDF2-210ENST00000592250 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.53
SDF2-210ENST00000592250 PLCG2P16885 1265 aa11.77□□□□□ -0.53
SDF2-210ENST00000592250 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
SDF2-210ENST00000592250 ABCC5O15440 1437 aa11.77□□□□□ -0.53
SDF2-210ENST00000592250 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
SDF2-210ENST00000592250 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
SDF2-210ENST00000592250 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms