RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
VMP1-214ENST00000592106 NCOA1Q15788 1441 aa16.05■□□□□ 0.16
VMP1-214ENST00000592106 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
VMP1-214ENST00000592106 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
VMP1-214ENST00000592106 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
VMP1-214ENST00000592106 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
VMP1-214ENST00000592106 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
VMP1-214ENST00000592106 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
VMP1-214ENST00000592106 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
VMP1-214ENST00000592106 TSPY4P0CV99 314 aa16.02■□□□□ 0.16
VMP1-214ENST00000592106 TSPY10P0CW01 314 aa16.02■□□□□ 0.16
VMP1-214ENST00000592106 PTPRKQ15262 1439 aa16.02■□□□□ 0.15
VMP1-214ENST00000592106 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
VMP1-214ENST00000592106 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
VMP1-214ENST00000592106 PLA2R1Q13018 1463 aa16■□□□□ 0.15
VMP1-214ENST00000592106 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
VMP1-214ENST00000592106 KIF3BO15066 747 aa15.99■□□□□ 0.15
VMP1-214ENST00000592106 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
VMP1-214ENST00000592106 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
VMP1-214ENST00000592106 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
VMP1-214ENST00000592106 APLP2Q06481 763 aa15.96■□□□□ 0.15
VMP1-214ENST00000592106 PKD2Q13563 968 aa15.96■□□□□ 0.15
VMP1-214ENST00000592106 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
VMP1-214ENST00000592106 PZPP20742 1482 aa15.96■□□□□ 0.14
VMP1-214ENST00000592106 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.14
VMP1-214ENST00000592106 ILDR2Q71H61 639 aa15.95■□□□□ 0.14
VMP1-214ENST00000592106 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
VMP1-214ENST00000592106 TNRQ92752 1358 aa15.94■□□□□ 0.14
VMP1-214ENST00000592106 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
VMP1-214ENST00000592106 EIF2AK4Q9P2K8 1649 aaKnown RBP15.93■□□□□ 0.14
VMP1-214ENST00000592106 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
VMP1-214ENST00000592106 TCOF1Q13428 1488 aaKnown RBP15.92■□□□□ 0.14
VMP1-214ENST00000592106 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
VMP1-214ENST00000592106 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
VMP1-214ENST00000592106 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
VMP1-214ENST00000592106 DNMT1P26358 1616 aaKnown RBP15.9■□□□□ 0.14
VMP1-214ENST00000592106 DISP3Q9P2K9 1392 aa15.9■□□□□ 0.14
VMP1-214ENST00000592106 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
VMP1-214ENST00000592106 NLRP1Q9C000 1473 aa15.89■□□□□ 0.13
VMP1-214ENST00000592106 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
VMP1-214ENST00000592106 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
VMP1-214ENST00000592106 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
VMP1-214ENST00000592106 POLR1AO95602 1720 aaPredicted RBP15.88■□□□□ 0.13
VMP1-214ENST00000592106 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
VMP1-214ENST00000592106 ABCC3O15438 1527 aa15.86■□□□□ 0.13
VMP1-214ENST00000592106 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
VMP1-214ENST00000592106 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
VMP1-214ENST00000592106 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
VMP1-214ENST00000592106 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
VMP1-214ENST00000592106 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
VMP1-214ENST00000592106 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.12
VMP1-214ENST00000592106 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
VMP1-214ENST00000592106 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
VMP1-214ENST00000592106 CEP152O94986 1710 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 ERVK-7P63135 1459 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 FGD6Q6ZV73 1430 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 ANKLE2Q86XL3 938 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 MROH1Q8NDA8 1641 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
VMP1-214ENST00000592106 CPS1P31327 1500 aa15.8■□□□□ 0.12
VMP1-214ENST00000592106 PRDM15P57071 1507 aaPredicted RBP15.8■□□□□ 0.12
VMP1-214ENST00000592106 ABCC5O15440 1437 aa15.8■□□□□ 0.12
VMP1-214ENST00000592106 DAPK1P53355 1430 aa15.8■□□□□ 0.12
VMP1-214ENST00000592106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
VMP1-214ENST00000592106 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
VMP1-214ENST00000592106 KANK1Q14678 1352 aa15.78■□□□□ 0.12
VMP1-214ENST00000592106 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
VMP1-214ENST00000592106 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.12
VMP1-214ENST00000592106 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.11
VMP1-214ENST00000592106 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
VMP1-214ENST00000592106 MED14O60244 1454 aa15.76■□□□□ 0.11
VMP1-214ENST00000592106 ARHGAP31Q2M1Z3 1444 aa15.76■□□□□ 0.11
VMP1-214ENST00000592106 IQGAP1P46940 1657 aa15.74■□□□□ 0.11
VMP1-214ENST00000592106 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
VMP1-214ENST00000592106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.118e-7■□□□□ 10.1
VMP1-214ENST00000592106 VWDEQ8N2E2 1590 aa15.7■□□□□ 0.1
VMP1-214ENST00000592106 LMTK2Q8IWU2 1503 aa15.7■□□□□ 0.1
VMP1-214ENST00000592106 TOM1O60784 492 aa15.7■□□□□ 0.1
VMP1-214ENST00000592106 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
VMP1-214ENST00000592106 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
VMP1-214ENST00000592106 SCAF11Q99590 1463 aaKnown RBP15.7■□□□□ 0.1
VMP1-214ENST00000592106 SYNMO15061 1565 aa15.69■□□□□ 0.1
VMP1-214ENST00000592106 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
VMP1-214ENST00000592106 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
VMP1-214ENST00000592106 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
VMP1-214ENST00000592106 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
VMP1-214ENST00000592106 SLIT1O75093 1534 aa15.67■□□□□ 0.1
VMP1-214ENST00000592106 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
VMP1-214ENST00000592106 EFCAB6Q5THR3 1501 aa15.65■□□□□ 0.1
VMP1-214ENST00000592106 KDM5AP29375 1690 aaKnown RBP15.65■□□□□ 0.1
VMP1-214ENST00000592106 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
VMP1-214ENST00000592106 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
VMP1-214ENST00000592106 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
VMP1-214ENST00000592106 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
VMP1-214ENST00000592106 RPRD2Q5VT52 1461 aaKnown RBP15.61■□□□□ 0.09
VMP1-214ENST00000592106 TMEM2Q9UHN6 1383 aa15.61■□□□□ 0.09
VMP1-214ENST00000592106 ADGRB3O60242 1522 aa15.6■□□□□ 0.09
VMP1-214ENST00000592106 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
VMP1-214ENST00000592106 NOS1P29475 1434 aa15.6■□□□□ 0.09
VMP1-214ENST00000592106 TET3O43151 1660 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms