RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 ADGBQ8N7X0 1667 aa23.35■■□□□ 1.33
H3F3B-211ENST00000591893 SLC4A3P48751 1232 aa23.35■■□□□ 1.33
H3F3B-211ENST00000591893 DAXXQ9UER7 740 aaPredicted RBP23.35■■□□□ 1.33
H3F3B-211ENST00000591893 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
H3F3B-211ENST00000591893 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
H3F3B-211ENST00000591893 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
H3F3B-211ENST00000591893 UBE2Q2Q8WVN8 375 aa23.33■■□□□ 1.33
H3F3B-211ENST00000591893 ARHGEF12Q9NZN5 1544 aa23.32■■□□□ 1.32
H3F3B-211ENST00000591893 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
H3F3B-211ENST00000591893 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
H3F3B-211ENST00000591893 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
H3F3B-211ENST00000591893 KDM2BQ8NHM5 1336 aa23.27■■□□□ 1.32
H3F3B-211ENST00000591893 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
H3F3B-211ENST00000591893 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
H3F3B-211ENST00000591893 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
H3F3B-211ENST00000591893 BLMP54132 1417 aaPredicted RBP23.26■■□□□ 1.31
H3F3B-211ENST00000591893 INSRP06213 1382 aa23.25■■□□□ 1.31
H3F3B-211ENST00000591893 CFDP1Q9UEE9 299 aaPredicted RBP23.25■■□□□ 1.31
H3F3B-211ENST00000591893 EIF5BO60841 1220 aaKnown RBP23.24■■□□□ 1.31
H3F3B-211ENST00000591893 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
H3F3B-211ENST00000591893 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
H3F3B-211ENST00000591893 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
H3F3B-211ENST00000591893 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
H3F3B-211ENST00000591893 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
H3F3B-211ENST00000591893 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
H3F3B-211ENST00000591893 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
H3F3B-211ENST00000591893 ANKRD50Q9ULJ7 1429 aa23.22■■□□□ 1.31
H3F3B-211ENST00000591893 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-211ENST00000591893 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
H3F3B-211ENST00000591893 C8orf34Q49A92 452 aa23.21■■□□□ 1.31
H3F3B-211ENST00000591893 DCAF11Q8TEB1 546 aa23.21■■□□□ 1.31
H3F3B-211ENST00000591893 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
H3F3B-211ENST00000591893 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
H3F3B-211ENST00000591893 NUP155O75694 1391 aa23.19■■□□□ 1.3
H3F3B-211ENST00000591893 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
H3F3B-211ENST00000591893 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
H3F3B-211ENST00000591893 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
H3F3B-211ENST00000591893 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
H3F3B-211ENST00000591893 FAM43AQ8N2R8 423 aa23.16■■□□□ 1.3
H3F3B-211ENST00000591893 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
H3F3B-211ENST00000591893 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
H3F3B-211ENST00000591893 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
H3F3B-211ENST00000591893 CC2D1BQ5T0F9 858 aaKnown RBP23.16■■□□□ 1.3
H3F3B-211ENST00000591893 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
H3F3B-211ENST00000591893 KIAA0556O60303 1618 aa23.14■■□□□ 1.3
H3F3B-211ENST00000591893 RSPH6AQ9H0K4 717 aa23.14■■□□□ 1.3
H3F3B-211ENST00000591893 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
H3F3B-211ENST00000591893 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
H3F3B-211ENST00000591893 PLB1Q6P1J6 1458 aa23.09■■□□□ 1.29
H3F3B-211ENST00000591893 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
H3F3B-211ENST00000591893 RGS3P49796 1198 aa23.08■■□□□ 1.29
H3F3B-211ENST00000591893 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
H3F3B-211ENST00000591893 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
H3F3B-211ENST00000591893 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
H3F3B-211ENST00000591893 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
H3F3B-211ENST00000591893 PANK3Q9H999 370 aa23.05■■□□□ 1.28
H3F3B-211ENST00000591893 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
H3F3B-211ENST00000591893 ADCY10Q96PN6 1610 aa23.05■■□□□ 1.28
H3F3B-211ENST00000591893 C9orf84Q5VXU9 1444 aa23.03■■□□□ 1.28
H3F3B-211ENST00000591893 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
H3F3B-211ENST00000591893 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
H3F3B-211ENST00000591893 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
H3F3B-211ENST00000591893 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
H3F3B-211ENST00000591893 SHANK2Q9UPX8 1470 aa23.02■■□□□ 1.28
H3F3B-211ENST00000591893 PTPRGP23470 1445 aa23.02■■□□□ 1.28
H3F3B-211ENST00000591893 GPRASP1Q5JY77 1395 aa23■■□□□ 1.27
H3F3B-211ENST00000591893 TESK2Q96S53 571 aa23■■□□□ 1.27
H3F3B-211ENST00000591893 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
H3F3B-211ENST00000591893 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
H3F3B-211ENST00000591893 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
H3F3B-211ENST00000591893 POGKQ9P215 609 aa22.98■■□□□ 1.27
H3F3B-211ENST00000591893 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
H3F3B-211ENST00000591893 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
H3F3B-211ENST00000591893 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
H3F3B-211ENST00000591893 PRDM15P57071 1507 aaPredicted RBP22.96■■□□□ 1.27
H3F3B-211ENST00000591893 WDR43Q15061 677 aaKnown RBP eCLIP22.96■■□□□ 1.27
H3F3B-211ENST00000591893 LAMC1P11047 1609 aa22.96■■□□□ 1.27
H3F3B-211ENST00000591893 USP19O94966 1318 aa22.95■■□□□ 1.26
H3F3B-211ENST00000591893 TSPY4P0CV99 314 aa22.95■■□□□ 1.26
H3F3B-211ENST00000591893 TSPY10P0CW01 314 aa22.95■■□□□ 1.26
H3F3B-211ENST00000591893 CCDC144AA2RUR9 1427 aa22.94■■□□□ 1.26
H3F3B-211ENST00000591893 EIF3AQ14152 1382 aaKnown RBP22.94■■□□□ 1.26
H3F3B-211ENST00000591893 TMF1P82094 1093 aa22.94■■□□□ 1.26
H3F3B-211ENST00000591893 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
H3F3B-211ENST00000591893 SLFN5Q08AF3 891 aa22.92■■□□□ 1.26
H3F3B-211ENST00000591893 FAM135AQ9P2D6 1515 aa22.91■■□□□ 1.26
H3F3B-211ENST00000591893 BECN1Q14457 450 aa22.91■■□□□ 1.26
H3F3B-211ENST00000591893 L1TD1Q5T7N2 865 aaKnown RBP22.9■■□□□ 1.26
H3F3B-211ENST00000591893 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
H3F3B-211ENST00000591893 RRAGDQ9NQL2 400 aaPredicted RBP22.9■■□□□ 1.26
H3F3B-211ENST00000591893 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
H3F3B-211ENST00000591893 A2MP01023 1474 aa22.89■■□□□ 1.26
H3F3B-211ENST00000591893 TRMT2AQ8IZ69 625 aaKnown RBP22.87■■□□□ 1.25
H3F3B-211ENST00000591893 SLKQ9H2G2 1235 aaPredicted RBP22.87■■□□□ 1.25
H3F3B-211ENST00000591893 IGHDP01880 384 aa22.86■■□□□ 1.25
H3F3B-211ENST00000591893 SEC24BO95487 1268 aa22.85■■□□□ 1.25
H3F3B-211ENST00000591893 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
H3F3B-211ENST00000591893 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
H3F3B-211ENST00000591893 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
H3F3B-211ENST00000591893 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms