RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
DNMT1-225ENST00000591798 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
DNMT1-225ENST00000591798 TNRQ92752 1358 aa14.19□□□□□ -0.14
DNMT1-225ENST00000591798 DEPDC5O75140 1603 aa14.19□□□□□ -0.14
DNMT1-225ENST00000591798 STRCP1A6NGW2 1772 aa14.18□□□□□ -0.14
DNMT1-225ENST00000591798 MED14O60244 1454 aa14.18□□□□□ -0.14
DNMT1-225ENST00000591798 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
DNMT1-225ENST00000591798 ANKLE2Q86XL3 938 aa14.17□□□□□ -0.14
DNMT1-225ENST00000591798 PZPP20742 1482 aa14.17□□□□□ -0.14
DNMT1-225ENST00000591798 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
DNMT1-225ENST00000591798 RNF17Q9BXT8 1623 aaKnown RBP14.16□□□□□ -0.14
DNMT1-225ENST00000591798 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-225ENST00000591798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.16□□□□□ -0.14
DNMT1-225ENST00000591798 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-225ENST00000591798 SYNMO15061 1565 aa14.15□□□□□ -0.14
DNMT1-225ENST00000591798 FBXO31Q5XUX0 539 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-225ENST00000591798 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
DNMT1-225ENST00000591798 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
DNMT1-225ENST00000591798 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
DNMT1-225ENST00000591798 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
DNMT1-225ENST00000591798 DHX29Q7Z478 1369 aaKnown RBP14.13□□□□□ -0.15
DNMT1-225ENST00000591798 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
DNMT1-225ENST00000591798 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-225ENST00000591798 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-225ENST00000591798 LRRC7Q96NW7 1537 aa14.13□□□□□ -0.15
DNMT1-225ENST00000591798 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
DNMT1-225ENST00000591798 MSH5O43196 834 aa14.12□□□□□ -0.15
DNMT1-225ENST00000591798 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
DNMT1-225ENST00000591798 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
DNMT1-225ENST00000591798 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
DNMT1-225ENST00000591798 KIF3BO15066 747 aa14.09□□□□□ -0.15
DNMT1-225ENST00000591798 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
DNMT1-225ENST00000591798 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-225ENST00000591798 WASHC2CQ9Y4E1 1318 aa14.08□□□□□ -0.16
DNMT1-225ENST00000591798 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
DNMT1-225ENST00000591798 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
DNMT1-225ENST00000591798 POTEAQ6S8J7 498 aa14.03□□□□□ -0.16
DNMT1-225ENST00000591798 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
DNMT1-225ENST00000591798 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
DNMT1-225ENST00000591798 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
DNMT1-225ENST00000591798 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
DNMT1-225ENST00000591798 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
DNMT1-225ENST00000591798 ABCC3O15438 1527 aa14□□□□□ -0.17
DNMT1-225ENST00000591798 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
DNMT1-225ENST00000591798 SCAF11Q99590 1463 aaKnown RBP13.99□□□□□ -0.17
DNMT1-225ENST00000591798 FAM135BQ49AJ0 1406 aa13.99□□□□□ -0.17
DNMT1-225ENST00000591798 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
DNMT1-225ENST00000591798 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
DNMT1-225ENST00000591798 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-225ENST00000591798 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
DNMT1-225ENST00000591798 SLIT1O75093 1534 aa13.96□□□□□ -0.17
DNMT1-225ENST00000591798 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
DNMT1-225ENST00000591798 ARHGAP23Q9P227 1491 aa13.96□□□□□ -0.17
DNMT1-225ENST00000591798 RSPH4AQ5TD94 716 aa13.96□□□□□ -0.17
DNMT1-225ENST00000591798 CEP152O94986 1710 aa13.95□□□□□ -0.18
DNMT1-225ENST00000591798 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
DNMT1-225ENST00000591798 EIF2AK4Q9P2K8 1649 aaKnown RBP13.94□□□□□ -0.18
DNMT1-225ENST00000591798 LTKP29376 864 aa13.94□□□□□ -0.18
DNMT1-225ENST00000591798 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
DNMT1-225ENST00000591798 TXNDC2Q86VQ3 553 aa13.92□□□□□ -0.18
DNMT1-225ENST00000591798 MAP3K1Q13233 1512 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 TMEM94Q12767 1356 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
DNMT1-225ENST00000591798 MAST1Q9Y2H9 1570 aa13.89□□□□□ -0.19
DNMT1-225ENST00000591798 LRRC9Q6ZRR7 1453 aa13.89□□□□□ -0.19
DNMT1-225ENST00000591798 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
DNMT1-225ENST00000591798 PIK3C2BO00750 1634 aa13.88□□□□□ -0.19
DNMT1-225ENST00000591798 KDM5AP29375 1690 aaKnown RBP13.86□□□□□ -0.19
DNMT1-225ENST00000591798 KCNA6P17658 529 aa13.86□□□□□ -0.19
DNMT1-225ENST00000591798 ADRA2BP18089 450 aa13.86□□□□□ -0.19
DNMT1-225ENST00000591798 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
DNMT1-225ENST00000591798 JCADQ9P266 1359 aa13.85□□□□□ -0.19
DNMT1-225ENST00000591798 TMEM2Q9UHN6 1383 aa13.85□□□□□ -0.19
DNMT1-225ENST00000591798 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
DNMT1-225ENST00000591798 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
DNMT1-225ENST00000591798 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
DNMT1-225ENST00000591798 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
DNMT1-225ENST00000591798 TET3O43151 1660 aa13.84□□□□□ -0.19
DNMT1-225ENST00000591798 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
DNMT1-225ENST00000591798 COL16A1Q07092 1604 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-225ENST00000591798 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
DNMT1-225ENST00000591798 EFCAB6Q5THR3 1501 aa13.82□□□□□ -0.2
DNMT1-225ENST00000591798 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
DNMT1-225ENST00000591798 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
DNMT1-225ENST00000591798 LRP6O75581 1613 aa13.81□□□□□ -0.2
DNMT1-225ENST00000591798 MSH6P52701 1360 aa13.81□□□□□ -0.2
DNMT1-225ENST00000591798 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
DNMT1-225ENST00000591798 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
DNMT1-225ENST00000591798 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
DNMT1-225ENST00000591798 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-225ENST00000591798 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
DNMT1-225ENST00000591798 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
DNMT1-225ENST00000591798 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
DNMT1-225ENST00000591798 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
DNMT1-225ENST00000591798 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
DNMT1-225ENST00000591798 ADGRB3O60242 1522 aa13.75□□□□□ -0.21
DNMT1-225ENST00000591798 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms