RNA–Protein interactions for RNA: ENST00000591749.1

LAMA3-212, Transcript of laminin subunit alpha 3, humanhuman

TSL 4

Gene LAMA3, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-212ENST00000591749 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
LAMA3-212ENST00000591749 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
LAMA3-212ENST00000591749 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
LAMA3-212ENST00000591749 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
LAMA3-212ENST00000591749 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
LAMA3-212ENST00000591749 SPATA31D1Q6ZQQ2 1576 aa19.43■□□□□ 0.7
LAMA3-212ENST00000591749 PZPP20742 1482 aa19.42■□□□□ 0.7
LAMA3-212ENST00000591749 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
LAMA3-212ENST00000591749 TNRQ92752 1358 aa19.42■□□□□ 0.7
LAMA3-212ENST00000591749 WASHC2CQ9Y4E1 1318 aa19.41■□□□□ 0.7
LAMA3-212ENST00000591749 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
LAMA3-212ENST00000591749 TSPY4P0CV99 314 aa19.39■□□□□ 0.69
LAMA3-212ENST00000591749 TSPY10P0CW01 314 aa19.39■□□□□ 0.69
LAMA3-212ENST00000591749 NEURL4Q96JN8 1562 aa19.39■□□□□ 0.69
LAMA3-212ENST00000591749 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
LAMA3-212ENST00000591749 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
LAMA3-212ENST00000591749 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
LAMA3-212ENST00000591749 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
LAMA3-212ENST00000591749 MIA2Q96PC5 1412 aa19.35■□□□□ 0.69
LAMA3-212ENST00000591749 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
LAMA3-212ENST00000591749 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
LAMA3-212ENST00000591749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.69
LAMA3-212ENST00000591749 SOCS7O14512 581 aa19.33■□□□□ 0.68
LAMA3-212ENST00000591749 NLRP1Q9C000 1473 aa19.33■□□□□ 0.68
LAMA3-212ENST00000591749 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
LAMA3-212ENST00000591749 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
LAMA3-212ENST00000591749 ANKLE2Q86XL3 938 aa19.32■□□□□ 0.68
LAMA3-212ENST00000591749 THEMISQ8N1K5 641 aaPredicted RBP19.32■□□□□ 0.68
LAMA3-212ENST00000591749 ZC3H13Q5T200 1668 aaKnown RBP19.31■□□□□ 0.68
LAMA3-212ENST00000591749 SHANK2Q9UPX8 1470 aa19.3■□□□□ 0.68
LAMA3-212ENST00000591749 EIF2AK4Q9P2K8 1649 aaKnown RBP19.3■□□□□ 0.68
LAMA3-212ENST00000591749 ABCC3O15438 1527 aa19.3■□□□□ 0.68
LAMA3-212ENST00000591749 CPS1P31327 1500 aa19.3■□□□□ 0.68
LAMA3-212ENST00000591749 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
LAMA3-212ENST00000591749 CEP152O94986 1710 aa19.29■□□□□ 0.68
LAMA3-212ENST00000591749 MAP3K1Q13233 1512 aa19.29■□□□□ 0.68
LAMA3-212ENST00000591749 MROH1Q8NDA8 1641 aa19.28■□□□□ 0.68
LAMA3-212ENST00000591749 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.68
LAMA3-212ENST00000591749 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
LAMA3-212ENST00000591749 MED14O60244 1454 aa19.27■□□□□ 0.67
LAMA3-212ENST00000591749 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
LAMA3-212ENST00000591749 NPHP4O75161 1426 aaPredicted RBP19.25■□□□□ 0.67
LAMA3-212ENST00000591749 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
LAMA3-212ENST00000591749 ERVK-7P63135 1459 aa19.24■□□□□ 0.67
LAMA3-212ENST00000591749 TOM1O60784 492 aa19.24■□□□□ 0.67
LAMA3-212ENST00000591749 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
LAMA3-212ENST00000591749 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
LAMA3-212ENST00000591749 DUOX2Q9NRD8 1548 aa19.22■□□□□ 0.67
LAMA3-212ENST00000591749 HSPA1LP34931 641 aa19.22■□□□□ 0.67
LAMA3-212ENST00000591749 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
LAMA3-212ENST00000591749 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
LAMA3-212ENST00000591749 ALKQ9UM73 1620 aa19.18■□□□□ 0.66
LAMA3-212ENST00000591749 PTPN23Q9H3S7 1636 aa19.18■□□□□ 0.66
LAMA3-212ENST00000591749 KIF15Q9NS87 1388 aa19.17■□□□□ 0.66
LAMA3-212ENST00000591749 ABCC5O15440 1437 aa19.16■□□□□ 0.66
LAMA3-212ENST00000591749 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
LAMA3-212ENST00000591749 RRP7BPQ9NSQ0 103 aa19.15■□□□□ 0.66
LAMA3-212ENST00000591749 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
LAMA3-212ENST00000591749 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
LAMA3-212ENST00000591749 ERBINQ96RT1 1412 aa19.14■□□□□ 0.65
LAMA3-212ENST00000591749 LRRC7Q96NW7 1537 aa19.14■□□□□ 0.65
LAMA3-212ENST00000591749 SCAF11Q99590 1463 aaKnown RBP19.13■□□□□ 0.65
LAMA3-212ENST00000591749 SYNMO15061 1565 aa19.12■□□□□ 0.65
LAMA3-212ENST00000591749 ARHGAP23Q9P227 1491 aa19.11■□□□□ 0.65
LAMA3-212ENST00000591749 DAPK1P53355 1430 aa19.11■□□□□ 0.65
LAMA3-212ENST00000591749 LTKP29376 864 aa19.11■□□□□ 0.65
LAMA3-212ENST00000591749 APLP2Q06481 763 aa19.11■□□□□ 0.65
LAMA3-212ENST00000591749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.11■□□□□ 0.65
LAMA3-212ENST00000591749 SLIT1O75093 1534 aa19.1■□□□□ 0.65
LAMA3-212ENST00000591749 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
LAMA3-212ENST00000591749 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
LAMA3-212ENST00000591749 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
LAMA3-212ENST00000591749 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.65
LAMA3-212ENST00000591749 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
LAMA3-212ENST00000591749 KANK1Q14678 1352 aa19.06■□□□□ 0.64
LAMA3-212ENST00000591749 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
LAMA3-212ENST00000591749 EID1Q9Y6B2 187 aa19.05■□□□□ 0.64
LAMA3-212ENST00000591749 KDM5AP29375 1690 aaKnown RBP19.04■□□□□ 0.64
LAMA3-212ENST00000591749 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
LAMA3-212ENST00000591749 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
LAMA3-212ENST00000591749 TMEM2Q9UHN6 1383 aa19.03■□□□□ 0.64
LAMA3-212ENST00000591749 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
LAMA3-212ENST00000591749 IDI1Q13907 227 aa19.01■□□□□ 0.63
LAMA3-212ENST00000591749 EFCAB6Q5THR3 1501 aa19■□□□□ 0.63
LAMA3-212ENST00000591749 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
LAMA3-212ENST00000591749 NOS1P29475 1434 aa18.97■□□□□ 0.63
LAMA3-212ENST00000591749 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
LAMA3-212ENST00000591749 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
LAMA3-212ENST00000591749 TET3O43151 1660 aa18.95■□□□□ 0.62
LAMA3-212ENST00000591749 ADGRB3O60242 1522 aa18.95■□□□□ 0.62
LAMA3-212ENST00000591749 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
LAMA3-212ENST00000591749 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
LAMA3-212ENST00000591749 KCNA6P17658 529 aa18.92■□□□□ 0.62
LAMA3-212ENST00000591749 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
LAMA3-212ENST00000591749 SLC52A1Q9NWF4 448 aa18.91■□□□□ 0.62
LAMA3-212ENST00000591749 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
LAMA3-212ENST00000591749 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
LAMA3-212ENST00000591749 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
LAMA3-212ENST00000591749 PROSER2Q86WR7 435 aaPredicted RBP18.89■□□□□ 0.61
LAMA3-212ENST00000591749 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms