RNA–Protein interactions for RNA: ENST00000591736.5

RANBP3-223, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-223	ENST00000591736	RNF17	Q9BXT8	1623 aa	Known RBP	28.61	■■■□□ 2.17
RANBP3-223	ENST00000591736	KDM5D	Q9BY66	1539 aa		28.6	■■■□□ 2.17
RANBP3-223	ENST00000591736	DUOX2	Q9NRD8	1548 aa		28.6	■■■□□ 2.17
RANBP3-223	ENST00000591736	PTPRK	Q15262	1439 aa		28.6	■■■□□ 2.17
RANBP3-223	ENST00000591736	KIF15	Q9NS87	1388 aa		28.54	■■■□□ 2.16
RANBP3-223	ENST00000591736	WASHC2C	Q9Y4E1	1318 aa		28.52	■■■□□ 2.16
RANBP3-223	ENST00000591736	ERBIN	Q96RT1	1412 aa		28.52	■■■□□ 2.16
RANBP3-223	ENST00000591736	MROH1	Q8NDA8	1641 aa		28.51	■■■□□ 2.15
RANBP3-223	ENST00000591736	PZP	P20742	1482 aa		28.51	■■■□□ 2.15
RANBP3-223	ENST00000591736	STRC	Q7RTU9	1775 aa		28.5	■■■□□ 2.15
RANBP3-223	ENST00000591736	ZC3H13	Q5T200	1668 aa	Known RBP	28.5	■■■□□ 2.15
RANBP3-223	ENST00000591736	MYO3A	Q8NEV4	1616 aa		28.5	■■■□□ 2.15
RANBP3-223	ENST00000591736	ZNF142	P52746	1687 aa	Predicted RBP	28.49	■■■□□ 2.15
RANBP3-223	ENST00000591736	ANKRD30A	Q9BXX3	1397 aa		28.49	■■■□□ 2.15
RANBP3-223	ENST00000591736	ADGRL2	O95490	1459 aa		28.48	■■■□□ 2.15
RANBP3-223	ENST00000591736	RRP7BP	Q9NSQ0	103 aa		28.48	■■■□□ 2.15
RANBP3-223	ENST00000591736	ABCC3	O15438	1527 aa		28.48	■■■□□ 2.15
RANBP3-223	ENST00000591736	NCOA1	Q15788	1441 aa		28.47	■■■□□ 2.15
RANBP3-223	ENST00000591736	FAM50A	Q14320	339 aa	Known RBP	28.45	■■■□□ 2.14
RANBP3-223	ENST00000591736	PRDM15	P57071	1507 aa	Predicted RBP	28.43	■■■□□ 2.14
RANBP3-223	ENST00000591736	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.43	■■■□□ 2.14
RANBP3-223	ENST00000591736	CHIC2	Q9UKJ5	165 aa		28.43	■■■□□ 2.14
RANBP3-223	ENST00000591736	DEPDC5	O75140	1603 aa		28.43	■■■□□ 2.14
RANBP3-223	ENST00000591736	DMRT2	Q9Y5R5	561 aa		28.41	■■■□□ 2.14
RANBP3-223	ENST00000591736	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.4	■■■□□ 2.14
RANBP3-223	ENST00000591736	TNR	Q92752	1358 aa		28.39	■■■□□ 2.14
RANBP3-223	ENST00000591736	CAMSAP1	Q5T5Y3	1602 aa		28.39	■■■□□ 2.13
RANBP3-223	ENST00000591736	A2ML1	A8K2U0	1454 aa		28.39	■■■□□ 2.13
RANBP3-223	ENST00000591736	CEP152	O94986	1710 aa		28.38	■■■□□ 2.13
RANBP3-223	ENST00000591736	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.37	■■■□□ 2.13
RANBP3-223	ENST00000591736	PTPRT	O14522	1441 aa		28.36	■■■□□ 2.13
RANBP3-223	ENST00000591736	PLA2R1	Q13018	1463 aa		28.35	■■■□□ 2.13
RANBP3-223	ENST00000591736	SPATA31D1	Q6ZQQ2	1576 aa		28.34	■■■□□ 2.13
RANBP3-223	ENST00000591736	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.33	■■■□□ 2.13
RANBP3-223	ENST00000591736	ARHGAP31	Q2M1Z3	1444 aa		28.32	■■■□□ 2.12
RANBP3-223	ENST00000591736	NLRP1	Q9C000	1473 aa		28.32	■■■□□ 2.12
RANBP3-223	ENST00000591736	VWDE	Q8N2E2	1590 aa		28.32	■■■□□ 2.12
RANBP3-223	ENST00000591736	ERVK-7	P63135	1459 aa		28.3	■■■□□ 2.12
RANBP3-223	ENST00000591736	LMTK2	Q8IWU2	1503 aa		28.29	■■■□□ 2.12
RANBP3-223	ENST00000591736	ROCK1	Q13464	1354 aa		28.29	■■■□□ 2.12
RANBP3-223	ENST00000591736	ANKRD50	Q9ULJ7	1429 aa		28.28	■■■□□ 2.12
RANBP3-223	ENST00000591736	KANK1	Q14678	1352 aa		28.28	■■■□□ 2.12
RANBP3-223	ENST00000591736	ILDR1	Q86SU0	546 aa	Predicted RBP	28.28	■■■□□ 2.12
RANBP3-223	ENST00000591736	PKD2	Q13563	968 aa		28.26	■■■□□ 2.11
RANBP3-223	ENST00000591736	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.25	■■■□□ 2.11	2e-7	■□□□□ 10.3
RANBP3-223	ENST00000591736	RRBP1	Q9P2E9	1410 aa	Known RBP	28.24	■■■□□ 2.11
RANBP3-223	ENST00000591736	NCKAP5L	Q9HCH0	1330 aa		28.22	■■■□□ 2.11
RANBP3-223	ENST00000591736	UGGT1	Q9NYU2	1555 aa		28.2	■■■□□ 2.11
RANBP3-223	ENST00000591736	CFAP65	Q6ZU64	1925 aa	Known RBP	28.19	■■■□□ 2.1
RANBP3-223	ENST00000591736	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.18	■■■□□ 2.1
RANBP3-223	ENST00000591736	FBXO41	Q8TF61	875 aa		28.18	■■■□□ 2.1
RANBP3-223	ENST00000591736	CERK	Q8TCT0	537 aa		28.17	■■■□□ 2.1
RANBP3-223	ENST00000591736	EFCAB6	Q5THR3	1501 aa		28.17	■■■□□ 2.1
RANBP3-223	ENST00000591736	UNC13B	O14795	1591 aa		28.16	■■■□□ 2.1
RANBP3-223	ENST00000591736	POLR1A	O95602	1720 aa	Predicted RBP	28.16	■■■□□ 2.1
RANBP3-223	ENST00000591736	NEURL4	Q96JN8	1562 aa		28.13	■■■□□ 2.09
RANBP3-223	ENST00000591736	LTBP4	Q8N2S1	1624 aa		28.12	■■■□□ 2.09
RANBP3-223	ENST00000591736	UBR1	Q8IWV7	1749 aa		28.12	■■■□□ 2.09
RANBP3-223	ENST00000591736	ITGAE	P38570	1179 aa		28.11	■■■□□ 2.09
RANBP3-223	ENST00000591736	RPRD2	Q5VT52	1461 aa	Known RBP	28.1	■■■□□ 2.09
RANBP3-223	ENST00000591736	TET3	O43151	1660 aa		28.1	■■■□□ 2.09
RANBP3-223	ENST00000591736	NOS1	P29475	1434 aa		28.09	■■■□□ 2.09
RANBP3-223	ENST00000591736	ANKLE2	Q86XL3	938 aa		28.09	■■■□□ 2.09
RANBP3-223	ENST00000591736	MED14	O60244	1454 aa		28.08	■■■□□ 2.09
RANBP3-223	ENST00000591736	SYNM	O15061	1565 aa		28.07	■■■□□ 2.08
RANBP3-223	ENST00000591736	GCC2	Q8IWJ2	1684 aa		28.06	■■■□□ 2.08
RANBP3-223	ENST00000591736	KDM5A	P29375	1690 aa	Known RBP	28.05	■■■□□ 2.08
RANBP3-223	ENST00000591736	IQGAP3	Q86VI3	1631 aa		28.05	■■■□□ 2.08
RANBP3-223	ENST00000591736	PIK3C2B	O00750	1634 aa		28.04	■■■□□ 2.08
RANBP3-223	ENST00000591736	SLIT1	O75093	1534 aa		28.02	■■■□□ 2.08
RANBP3-223	ENST00000591736	ARHGAP23	Q9P227	1491 aa		28.02	■■■□□ 2.08
RANBP3-223	ENST00000591736	IQSEC2	Q5JU85	1478 aa		28.01	■■■□□ 2.07
RANBP3-223	ENST00000591736	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28	■■■□□ 2.07
RANBP3-223	ENST00000591736	NPHP4	O75161	1426 aa	Predicted RBP	28	■■■□□ 2.07
RANBP3-223	ENST00000591736	IDI1	Q13907	227 aa		27.99	■■■□□ 2.07
RANBP3-223	ENST00000591736	SLC52A1	Q9NWF4	448 aa		27.98	■■■□□ 2.07
RANBP3-223	ENST00000591736	IQGAP1	P46940	1657 aa		27.97	■■■□□ 2.07
RANBP3-223	ENST00000591736	NUP155	O75694	1391 aa		27.97	■■■□□ 2.07
RANBP3-223	ENST00000591736		E9PCH4	1651 aa		27.97	■■■□□ 2.07
RANBP3-223	ENST00000591736	NAIP	Q13075	1403 aa		27.96	■■■□□ 2.07
RANBP3-223	ENST00000591736	SCAF11	Q99590	1463 aa	Known RBP	27.95	■■■□□ 2.07
RANBP3-223	ENST00000591736	ADGRB3	O60242	1522 aa		27.93	■■■□□ 2.06
RANBP3-223	ENST00000591736	TMEM2	Q9UHN6	1383 aa		27.93	■■■□□ 2.06
RANBP3-223	ENST00000591736	LTK	P29376	864 aa		27.91	■■■□□ 2.06
RANBP3-223	ENST00000591736	HFM1	A2PYH4	1435 aa		27.91	■■■□□ 2.06
RANBP3-223	ENST00000591736	TXNDC2	Q86VQ3	553 aa		27.89	■■■□□ 2.06
RANBP3-223	ENST00000591736	STAG3	Q9UJ98	1225 aa		27.89	■■■□□ 2.06
RANBP3-223	ENST00000591736	CPS1	P31327	1500 aa		27.88	■■■□□ 2.05
RANBP3-223	ENST00000591736	EID1	Q9Y6B2	187 aa		27.87	■■■□□ 2.05
RANBP3-223	ENST00000591736	TMEM131L	A2VDJ0	1609 aa		27.84	■■■□□ 2.05
RANBP3-223	ENST00000591736	MYO5B	Q9ULV0	1848 aa		27.8	■■■□□ 2.04
RANBP3-223	ENST00000591736	ZFYVE9	O95405	1425 aa		27.78	■■■□□ 2.04
RANBP3-223	ENST00000591736	STRCP1	A6NGW2	1772 aa		27.77	■■■□□ 2.04
RANBP3-223	ENST00000591736	SPHKAP	Q2M3C7	1700 aa		27.77	■■■□□ 2.04
RANBP3-223	ENST00000591736	RIMS2	Q9UQ26	1411 aa		27.72	■■■□□ 2.03
RANBP3-223	ENST00000591736	HDGF	P51858	240 aa	Known RBP	27.7	■■■□□ 2.02
RANBP3-223	ENST00000591736	LRRC7	Q96NW7	1537 aa		27.69	■■■□□ 2.02
RANBP3-223	ENST00000591736	TRPM2	O94759	1503 aa		27.68	■■■□□ 2.02
RANBP3-223	ENST00000591736	PLEKHG1	Q9ULL1	1385 aa		27.68	■■■□□ 2.02
RANBP3-223	ENST00000591736	UBAP1L	F5GYI3	381 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms