RNA–Protein interactions for RNA: ENST00000591611.5

TUBD1-212, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-212ENST00000591611 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
TUBD1-212ENST00000591611 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
TUBD1-212ENST00000591611 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
TUBD1-212ENST00000591611 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
TUBD1-212ENST00000591611 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
TUBD1-212ENST00000591611 ARHGEF40Q8TER5 1519 aa13.41□□□□□ -0.26
TUBD1-212ENST00000591611 CROCC2H7BZ55 1655 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
TUBD1-212ENST00000591611 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
TUBD1-212ENST00000591611 ABCA6Q8N139 1617 aa13.39□□□□□ -0.27
TUBD1-212ENST00000591611 DIP2CQ9Y2E4 1556 aa13.39□□□□□ -0.27
TUBD1-212ENST00000591611 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
TUBD1-212ENST00000591611 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
TUBD1-212ENST00000591611 ITGAEP38570 1179 aa13.37□□□□□ -0.27
TUBD1-212ENST00000591611 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
TUBD1-212ENST00000591611 ATP10AO60312 1499 aa13.36□□□□□ -0.27
TUBD1-212ENST00000591611 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
TUBD1-212ENST00000591611 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
TUBD1-212ENST00000591611 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
TUBD1-212ENST00000591611 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.27
TUBD1-212ENST00000591611 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
TUBD1-212ENST00000591611 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
TUBD1-212ENST00000591611 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
TUBD1-212ENST00000591611 A2MP01023 1474 aa13.33□□□□□ -0.28
TUBD1-212ENST00000591611 ADGBQ8N7X0 1667 aa13.33□□□□□ -0.28
TUBD1-212ENST00000591611 ANKRD30AQ9BXX3 1397 aa13.32□□□□□ -0.28
TUBD1-212ENST00000591611 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
TUBD1-212ENST00000591611 KIF15Q9NS87 1388 aa13.32□□□□□ -0.28
TUBD1-212ENST00000591611 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-212ENST00000591611 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
TUBD1-212ENST00000591611 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
TUBD1-212ENST00000591611 AGLP35573 1532 aa13.29□□□□□ -0.28
TUBD1-212ENST00000591611 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
TUBD1-212ENST00000591611 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-212ENST00000591611 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
TUBD1-212ENST00000591611 NAIPQ13075 1403 aa13.24□□□□□ -0.29
TUBD1-212ENST00000591611 ANKRD50Q9ULJ7 1429 aa13.24□□□□□ -0.29
TUBD1-212ENST00000591611 KIF3BO15066 747 aa13.24□□□□□ -0.29
TUBD1-212ENST00000591611 MLECQ14165 292 aa13.24□□□□□ -0.29
TUBD1-212ENST00000591611 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
TUBD1-212ENST00000591611 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
TUBD1-212ENST00000591611 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
TUBD1-212ENST00000591611 GCC2Q8IWJ2 1684 aa13.22□□□□□ -0.29
TUBD1-212ENST00000591611 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-212ENST00000591611 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
TUBD1-212ENST00000591611 GGT6Q6P531 493 aa13.21□□□□□ -0.29
TUBD1-212ENST00000591611 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
TUBD1-212ENST00000591611 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
TUBD1-212ENST00000591611 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.3
TUBD1-212ENST00000591611 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
TUBD1-212ENST00000591611 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
TUBD1-212ENST00000591611 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-212ENST00000591611 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
TUBD1-212ENST00000591611 MADDQ8WXG6 1647 aa13.18□□□□□ -0.3
TUBD1-212ENST00000591611 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-212ENST00000591611 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
TUBD1-212ENST00000591611 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
TUBD1-212ENST00000591611 UNC13BO14795 1591 aa13.15□□□□□ -0.3
TUBD1-212ENST00000591611 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
TUBD1-212ENST00000591611 ABCC3O15438 1527 aa13.14□□□□□ -0.31
TUBD1-212ENST00000591611 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
TUBD1-212ENST00000591611 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
TUBD1-212ENST00000591611 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-212ENST00000591611 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
TUBD1-212ENST00000591611 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
TUBD1-212ENST00000591611 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
TUBD1-212ENST00000591611 CLTCQ00610 1675 aaKnown RBP13.13□□□□□ -0.31
TUBD1-212ENST00000591611 KANK1Q14678 1352 aa13.13□□□□□ -0.31
TUBD1-212ENST00000591611 HAX1O00165 279 aa13.13□□□□□ -0.31
TUBD1-212ENST00000591611 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
TUBD1-212ENST00000591611 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
TUBD1-212ENST00000591611 PTPRMP28827 1452 aa13.11□□□□□ -0.31
TUBD1-212ENST00000591611 CEP152O94986 1710 aa13.11□□□□□ -0.31
TUBD1-212ENST00000591611 NUP155O75694 1391 aa13.11□□□□□ -0.31
TUBD1-212ENST00000591611 LMTK2Q8IWU2 1503 aa13.11□□□□□ -0.31
TUBD1-212ENST00000591611 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
TUBD1-212ENST00000591611 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
TUBD1-212ENST00000591611 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
TUBD1-212ENST00000591611 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
TUBD1-212ENST00000591611 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-212ENST00000591611 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
TUBD1-212ENST00000591611 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
TUBD1-212ENST00000591611 CAMSAP1Q5T5Y3 1602 aa13.08□□□□□ -0.32
TUBD1-212ENST00000591611 C3P01024 1663 aa13.08□□□□□ -0.32
TUBD1-212ENST00000591611 HRCP23327 699 aa13.07□□□□□ -0.32
TUBD1-212ENST00000591611 PZPP20742 1482 aa13.07□□□□□ -0.32
TUBD1-212ENST00000591611 EFCAB6Q5THR3 1501 aa13.07□□□□□ -0.32
TUBD1-212ENST00000591611 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
TUBD1-212ENST00000591611 TET3O43151 1660 aa13.06□□□□□ -0.32
TUBD1-212ENST00000591611 NPATQ14207 1427 aa13.05□□□□□ -0.32
TUBD1-212ENST00000591611 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
TUBD1-212ENST00000591611 FBXO31Q5XUX0 539 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-212ENST00000591611 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
TUBD1-212ENST00000591611 E9PCH4 1651 aa13.02□□□□□ -0.32
TUBD1-212ENST00000591611 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms