RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
TUBD1-211ENST00000591548 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
TUBD1-211ENST00000591548 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
TUBD1-211ENST00000591548 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
TUBD1-211ENST00000591548 PKD2Q13563 968 aa16.59■□□□□ 0.25
TUBD1-211ENST00000591548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.25
TUBD1-211ENST00000591548 A2MP01023 1474 aa16.58■□□□□ 0.25
TUBD1-211ENST00000591548 COL17A1Q9UMD9 1497 aaPredicted RBP16.58■□□□□ 0.25
TUBD1-211ENST00000591548 ZMYM4Q5VZL5 1548 aa16.58■□□□□ 0.25
TUBD1-211ENST00000591548 ANKRD30BQ9BXX2 1392 aa16.58■□□□□ 0.25
TUBD1-211ENST00000591548 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
TUBD1-211ENST00000591548 IQGAP3Q86VI3 1631 aa16.57■□□□□ 0.24
TUBD1-211ENST00000591548 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
TUBD1-211ENST00000591548 DEPDC5O75140 1603 aa16.57■□□□□ 0.24
TUBD1-211ENST00000591548 YEATS2Q9ULM3 1422 aa16.57■□□□□ 0.24
TUBD1-211ENST00000591548 KIF3BO15066 747 aa16.55■□□□□ 0.24
TUBD1-211ENST00000591548 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
TUBD1-211ENST00000591548 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
TUBD1-211ENST00000591548 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
TUBD1-211ENST00000591548 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
TUBD1-211ENST00000591548 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
TUBD1-211ENST00000591548 BCORL1Q5H9F3 1711 aa16.5■□□□□ 0.23
TUBD1-211ENST00000591548 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
TUBD1-211ENST00000591548 RPRD2Q5VT52 1461 aaKnown RBP16.49■□□□□ 0.23
TUBD1-211ENST00000591548 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
TUBD1-211ENST00000591548 KANK1Q14678 1352 aa16.48■□□□□ 0.23
TUBD1-211ENST00000591548 ATP10AO60312 1499 aa16.47■□□□□ 0.23
TUBD1-211ENST00000591548 PLA2R1Q13018 1463 aa16.45■□□□□ 0.22
TUBD1-211ENST00000591548 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
TUBD1-211ENST00000591548 TET3O43151 1660 aa16.45■□□□□ 0.22
TUBD1-211ENST00000591548 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
TUBD1-211ENST00000591548 GGT6Q6P531 493 aa16.44■□□□□ 0.22
TUBD1-211ENST00000591548 E9PCH4 1651 aa16.44■□□□□ 0.22
TUBD1-211ENST00000591548 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
TUBD1-211ENST00000591548 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
TUBD1-211ENST00000591548 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
TUBD1-211ENST00000591548 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
TUBD1-211ENST00000591548 CEP152O94986 1710 aa16.4■□□□□ 0.22
TUBD1-211ENST00000591548 AGLP35573 1532 aa16.4■□□□□ 0.22
TUBD1-211ENST00000591548 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
TUBD1-211ENST00000591548 ABCC3O15438 1527 aa16.39■□□□□ 0.21
TUBD1-211ENST00000591548 PTPRTO14522 1441 aa16.38■□□□□ 0.21
TUBD1-211ENST00000591548 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
TUBD1-211ENST00000591548 CCDC144AA2RUR9 1427 aa16.38■□□□□ 0.21
TUBD1-211ENST00000591548 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
TUBD1-211ENST00000591548 TRPM2O94759 1503 aa16.35■□□□□ 0.21
TUBD1-211ENST00000591548 NPATQ14207 1427 aa16.34■□□□□ 0.21
TUBD1-211ENST00000591548 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
TUBD1-211ENST00000591548 ZC3H13Q5T200 1668 aaKnown RBP16.34■□□□□ 0.21
TUBD1-211ENST00000591548 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
TUBD1-211ENST00000591548 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
TUBD1-211ENST00000591548 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
TUBD1-211ENST00000591548 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
TUBD1-211ENST00000591548 ADRA2BP18089 450 aa16.3■□□□□ 0.2
TUBD1-211ENST00000591548 NBPF8Q3BBV2 869 aa16.3■□□□□ 0.2
TUBD1-211ENST00000591548 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
TUBD1-211ENST00000591548 MLECQ14165 292 aa16.28■□□□□ 0.2
TUBD1-211ENST00000591548 UGGT1Q9NYU2 1555 aa16.28■□□□□ 0.2
TUBD1-211ENST00000591548 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
TUBD1-211ENST00000591548 NOS1P29475 1434 aa16.26■□□□□ 0.19
TUBD1-211ENST00000591548 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
TUBD1-211ENST00000591548 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
TUBD1-211ENST00000591548 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
TUBD1-211ENST00000591548 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
TUBD1-211ENST00000591548 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
TUBD1-211ENST00000591548 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
TUBD1-211ENST00000591548 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
TUBD1-211ENST00000591548 SYNMO15061 1565 aa16.23■□□□□ 0.19
TUBD1-211ENST00000591548 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
TUBD1-211ENST00000591548 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
TUBD1-211ENST00000591548 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.18
TUBD1-211ENST00000591548 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
TUBD1-211ENST00000591548 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
TUBD1-211ENST00000591548 KIF1BO60333 1816 aa16.19■□□□□ 0.18
TUBD1-211ENST00000591548 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
TUBD1-211ENST00000591548 ERVK-7P63135 1459 aa16.18■□□□□ 0.18
TUBD1-211ENST00000591548 ADGRB3O60242 1522 aa16.18■□□□□ 0.18
TUBD1-211ENST00000591548 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
TUBD1-211ENST00000591548 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
TUBD1-211ENST00000591548 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
TUBD1-211ENST00000591548 IDI1Q13907 227 aa16.16■□□□□ 0.18
TUBD1-211ENST00000591548 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-211ENST00000591548 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
TUBD1-211ENST00000591548 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
TUBD1-211ENST00000591548 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
TUBD1-211ENST00000591548 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
TUBD1-211ENST00000591548 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
TUBD1-211ENST00000591548 TRPM1Q7Z4N2 1603 aa16.13■□□□□ 0.17
TUBD1-211ENST00000591548 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
TUBD1-211ENST00000591548 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
TUBD1-211ENST00000591548 IFT172Q9UG01 1749 aa16.12■□□□□ 0.17
TUBD1-211ENST00000591548 EIF4G2P78344 907 aaKnown RBP eCLIP16.12■□□□□ 0.17
TUBD1-211ENST00000591548 MYOM2P54296 1465 aa16.1■□□□□ 0.17
TUBD1-211ENST00000591548 TMEM131LA2VDJ0 1609 aa16.1■□□□□ 0.17
TUBD1-211ENST00000591548 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
TUBD1-211ENST00000591548 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
TUBD1-211ENST00000591548 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
TUBD1-211ENST00000591548 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
TUBD1-211ENST00000591548 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
TUBD1-211ENST00000591548 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms