RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ANKRD30AQ9BXX3 1397 aa17.67■□□□□ 0.42
VMP1-211ENST00000591315 CNTLNQ9NXG0 1405 aa17.66■□□□□ 0.42
VMP1-211ENST00000591315 RRBP1Q9P2E9 1410 aaKnown RBP17.66■□□□□ 0.42
VMP1-211ENST00000591315 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
VMP1-211ENST00000591315 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
VMP1-211ENST00000591315 LMTK3Q96Q04 1460 aa17.65■□□□□ 0.42
VMP1-211ENST00000591315 HSPA2P54652 639 aa17.65■□□□□ 0.42
VMP1-211ENST00000591315 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
VMP1-211ENST00000591315 MROH2AA6NES4 1674 aa17.64■□□□□ 0.41
VMP1-211ENST00000591315 EIF2AK4Q9P2K8 1649 aaKnown RBP17.63■□□□□ 0.41
VMP1-211ENST00000591315 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
VMP1-211ENST00000591315 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
VMP1-211ENST00000591315 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
VMP1-211ENST00000591315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.418e-7■□□□□ 10.1
VMP1-211ENST00000591315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.41
VMP1-211ENST00000591315 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
VMP1-211ENST00000591315 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
VMP1-211ENST00000591315 ABCC3O15438 1527 aa17.6■□□□□ 0.41
VMP1-211ENST00000591315 KDM5DQ9BY66 1539 aa17.6■□□□□ 0.41
VMP1-211ENST00000591315 CEP152O94986 1710 aa17.58■□□□□ 0.41
VMP1-211ENST00000591315 ANKRD50Q9ULJ7 1429 aa17.58■□□□□ 0.41
VMP1-211ENST00000591315 CFAP65Q6ZU64 1925 aaKnown RBP17.58■□□□□ 0.4
VMP1-211ENST00000591315 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
VMP1-211ENST00000591315 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
VMP1-211ENST00000591315 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
VMP1-211ENST00000591315 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
VMP1-211ENST00000591315 NPATQ14207 1427 aa17.55■□□□□ 0.4
VMP1-211ENST00000591315 PZPP20742 1482 aa17.54■□□□□ 0.4
VMP1-211ENST00000591315 UHRF1BP1Q6BDS2 1440 aa17.54■□□□□ 0.4
VMP1-211ENST00000591315 FAM135AQ9P2D6 1515 aa17.52■□□□□ 0.4
VMP1-211ENST00000591315 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
VMP1-211ENST00000591315 ZC3H13Q5T200 1668 aaKnown RBP17.51■□□□□ 0.39
VMP1-211ENST00000591315 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
VMP1-211ENST00000591315 TNRQ92752 1358 aa17.5■□□□□ 0.39
VMP1-211ENST00000591315 MYO3AQ8NEV4 1616 aa17.5■□□□□ 0.39
VMP1-211ENST00000591315 KANK1Q14678 1352 aa17.48■□□□□ 0.39
VMP1-211ENST00000591315 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
VMP1-211ENST00000591315 NAIPQ13075 1403 aa17.47■□□□□ 0.39
VMP1-211ENST00000591315 UNC13BO14795 1591 aa17.45■□□□□ 0.38
VMP1-211ENST00000591315 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
VMP1-211ENST00000591315 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
VMP1-211ENST00000591315 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
VMP1-211ENST00000591315 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
VMP1-211ENST00000591315 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
VMP1-211ENST00000591315 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
VMP1-211ENST00000591315 A2ML1A8K2U0 1454 aa17.43■□□□□ 0.38
VMP1-211ENST00000591315 NUP155O75694 1391 aa17.42■□□□□ 0.38
VMP1-211ENST00000591315 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
VMP1-211ENST00000591315 GCC2Q8IWJ2 1684 aa17.41■□□□□ 0.38
VMP1-211ENST00000591315 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
VMP1-211ENST00000591315 HFM1A2PYH4 1435 aa17.39■□□□□ 0.38
VMP1-211ENST00000591315 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.37
VMP1-211ENST00000591315 TET3O43151 1660 aa17.39■□□□□ 0.37
VMP1-211ENST00000591315 NLRP1Q9C000 1473 aa17.37■□□□□ 0.37
VMP1-211ENST00000591315 SYNMO15061 1565 aa17.37■□□□□ 0.37
VMP1-211ENST00000591315 E9PCH4 1651 aa17.36■□□□□ 0.37
VMP1-211ENST00000591315 NOS1P29475 1434 aa17.36■□□□□ 0.37
VMP1-211ENST00000591315 IDI1Q13907 227 aa17.35■□□□□ 0.37
VMP1-211ENST00000591315 UGGT1Q9NYU2 1555 aa17.35■□□□□ 0.37
VMP1-211ENST00000591315 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
VMP1-211ENST00000591315 PIK3C2BO00750 1634 aa17.33■□□□□ 0.37
VMP1-211ENST00000591315 FOXD1Q16676 465 aa17.32■□□□□ 0.36
VMP1-211ENST00000591315 UBR1Q8IWV7 1749 aa17.32■□□□□ 0.36
VMP1-211ENST00000591315 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
VMP1-211ENST00000591315 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
VMP1-211ENST00000591315 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
VMP1-211ENST00000591315 PTPRTO14522 1441 aa17.29■□□□□ 0.36
VMP1-211ENST00000591315 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
VMP1-211ENST00000591315 PKD2Q13563 968 aa17.28■□□□□ 0.36
VMP1-211ENST00000591315 LTKP29376 864 aa17.27■□□□□ 0.36
VMP1-211ENST00000591315 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
VMP1-211ENST00000591315 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
VMP1-211ENST00000591315 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
VMP1-211ENST00000591315 ANKLE2Q86XL3 938 aa17.26■□□□□ 0.35
VMP1-211ENST00000591315 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
VMP1-211ENST00000591315 POLR1AO95602 1720 aaPredicted RBP17.26■□□□□ 0.35
VMP1-211ENST00000591315 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
VMP1-211ENST00000591315 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
VMP1-211ENST00000591315 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
VMP1-211ENST00000591315 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
VMP1-211ENST00000591315 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
VMP1-211ENST00000591315 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
VMP1-211ENST00000591315 ARHGAP23Q9P227 1491 aa17.23■□□□□ 0.35
VMP1-211ENST00000591315 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
VMP1-211ENST00000591315 TMEM2Q9UHN6 1383 aa17.22■□□□□ 0.35
VMP1-211ENST00000591315 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
VMP1-211ENST00000591315 SLIT1O75093 1534 aa17.21■□□□□ 0.35
VMP1-211ENST00000591315 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
VMP1-211ENST00000591315 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.34
VMP1-211ENST00000591315 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
VMP1-211ENST00000591315 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
VMP1-211ENST00000591315 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
VMP1-211ENST00000591315 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
VMP1-211ENST00000591315 MED14O60244 1454 aa17.18■□□□□ 0.34
VMP1-211ENST00000591315 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
VMP1-211ENST00000591315 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
VMP1-211ENST00000591315 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
VMP1-211ENST00000591315 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
VMP1-211ENST00000591315 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
VMP1-211ENST00000591315 TRPM2O94759 1503 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 251.4 ms