RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 STRCP1A6NGW2 1772 aa31.91■■■□□ 2.7
PCSK4-211ENST00000591303 TNRQ92752 1358 aa31.9■■■□□ 2.7
PCSK4-211ENST00000591303 FYCO1Q9BQS8 1478 aa31.9■■■□□ 2.7
PCSK4-211ENST00000591303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.88■■■□□ 2.69
PCSK4-211ENST00000591303 CFDP1Q9UEE9 299 aaPredicted RBP31.87■■■□□ 2.69
PCSK4-211ENST00000591303 MED14O60244 1454 aa31.85■■■□□ 2.69
PCSK4-211ENST00000591303 RGS17Q9UGC6 210 aaPredicted RBP31.85■■■□□ 2.69
PCSK4-211ENST00000591303 DEPDC5O75140 1603 aa31.85■■■□□ 2.69
PCSK4-211ENST00000591303 PZPP20742 1482 aa31.84■■■□□ 2.69
PCSK4-211ENST00000591303 SENP3Q9H4L4 574 aaPredicted RBP31.83■■■□□ 2.69
PCSK4-211ENST00000591303 NPHP4O75161 1426 aaPredicted RBP31.83■■■□□ 2.69
PCSK4-211ENST00000591303 ANKLE2Q86XL3 938 aa31.82■■■□□ 2.68
PCSK4-211ENST00000591303 MBD5Q9P267 1494 aa31.81■■■□□ 2.68
PCSK4-211ENST00000591303 LRRC7Q96NW7 1537 aa31.8■■■□□ 2.68
PCSK4-211ENST00000591303 ZNF644Q9H582 1327 aaPredicted RBP31.8■■■□□ 2.68
PCSK4-211ENST00000591303 IQGAP1P46940 1657 aa31.8■■■□□ 2.68
PCSK4-211ENST00000591303 KDM5DQ9BY66 1539 aa31.79■■■□□ 2.68
PCSK4-211ENST00000591303 DHX29Q7Z478 1369 aaKnown RBP31.79■■■□□ 2.68
PCSK4-211ENST00000591303 CCNB3Q8WWL7 1395 aa31.79■■■□□ 2.68
PCSK4-211ENST00000591303 RNF17Q9BXT8 1623 aaKnown RBP31.78■■■□□ 2.68
PCSK4-211ENST00000591303 UGGT1Q9NYU2 1555 aa31.77■■■□□ 2.68
PCSK4-211ENST00000591303 RTEL1-TNFRSF6BF6WH68 1400 aa31.75■■■□□ 2.67
PCSK4-211ENST00000591303 MIA2Q96PC5 1412 aa31.74■■■□□ 2.67
PCSK4-211ENST00000591303 SYNMO15061 1565 aa31.73■■■□□ 2.67
PCSK4-211ENST00000591303 NLRP1Q9C000 1473 aa31.73■■■□□ 2.67
PCSK4-211ENST00000591303 THEMISQ8N1K5 641 aaPredicted RBP31.73■■■□□ 2.67
PCSK4-211ENST00000591303 FAM135AQ9P2D6 1515 aa31.73■■■□□ 2.67
PCSK4-211ENST00000591303 TIAM1Q13009 1591 aa31.73■■■□□ 2.67
PCSK4-211ENST00000591303 KIF3BO15066 747 aa31.7■■■□□ 2.67
PCSK4-211ENST00000591303 ZC3H13Q5T200 1668 aaKnown RBP31.67■■■□□ 2.66
PCSK4-211ENST00000591303 XIRP1Q702N8 1843 aaKnown RBP31.64■■■□□ 2.66
PCSK4-211ENST00000591303 WASHC2CQ9Y4E1 1318 aa31.64■■■□□ 2.66
PCSK4-211ENST00000591303 MTUS2Q5JR59 1369 aa31.6■■■□□ 2.65
PCSK4-211ENST00000591303 POTEAQ6S8J7 498 aa31.58■■■□□ 2.65
PCSK4-211ENST00000591303 CCDC141Q6ZP82 1450 aa31.54■■■□□ 2.64
PCSK4-211ENST00000591303 UBR1Q8IWV7 1749 aa31.52■■■□□ 2.64
PCSK4-211ENST00000591303 EHBP1L1Q8N3D4 1523 aa31.5■■■□□ 2.63
PCSK4-211ENST00000591303 ABCC3O15438 1527 aa31.49■■■□□ 2.63
PCSK4-211ENST00000591303 SETD1AO15047 1707 aaKnown RBP31.48■■■□□ 2.63
PCSK4-211ENST00000591303 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
PCSK4-211ENST00000591303 CAMSAP2Q08AD1 1489 aa31.47■■■□□ 2.63
PCSK4-211ENST00000591303 CEP162Q5TB80 1403 aa31.47■■■□□ 2.63
PCSK4-211ENST00000591303 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
PCSK4-211ENST00000591303 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
PCSK4-211ENST00000591303 SCAF11Q99590 1463 aaKnown RBP31.44■■■□□ 2.62
PCSK4-211ENST00000591303 FAM135BQ49AJ0 1406 aa31.43■■■□□ 2.62
PCSK4-211ENST00000591303 CFAP65Q6ZU64 1925 aaKnown RBP31.43■■■□□ 2.62
PCSK4-211ENST00000591303 LTKP29376 864 aa31.41■■■□□ 2.62
PCSK4-211ENST00000591303 ARHGAP23Q9P227 1491 aa31.4■■■□□ 2.62
PCSK4-211ENST00000591303 MROH1Q8NDA8 1641 aa31.4■■■□□ 2.62
PCSK4-211ENST00000591303 SLIT1O75093 1534 aa31.38■■■□□ 2.61
PCSK4-211ENST00000591303 ARHGEF5Q12774 1597 aa31.38■■■□□ 2.61
PCSK4-211ENST00000591303 CEP152O94986 1710 aa31.38■■■□□ 2.61
PCSK4-211ENST00000591303 ROBO1Q9Y6N7 1651 aa31.37■■■□□ 2.61
PCSK4-211ENST00000591303 RSPH4AQ5TD94 716 aa31.35■■■□□ 2.61
PCSK4-211ENST00000591303 TXNDC2Q86VQ3 553 aa31.31■■■□□ 2.6
PCSK4-211ENST00000591303 EIF2AK4Q9P2K8 1649 aaKnown RBP31.31■■■□□ 2.6
PCSK4-211ENST00000591303 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
PCSK4-211ENST00000591303 TMEM94Q12767 1356 aa31.27■■■□□ 2.6
PCSK4-211ENST00000591303 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.6
PCSK4-211ENST00000591303 TSPY4P0CV99 314 aa31.24■■■□□ 2.59
PCSK4-211ENST00000591303 TSPY10P0CW01 314 aa31.24■■■□□ 2.59
PCSK4-211ENST00000591303 PIK3C2BO00750 1634 aa31.23■■■□□ 2.59
PCSK4-211ENST00000591303 RBM33Q96EV2 1170 aaKnown RBP31.2■■■□□ 2.59
PCSK4-211ENST00000591303 PHLPP1O60346 1717 aa31.17■■■□□ 2.58
PCSK4-211ENST00000591303 TMEM2Q9UHN6 1383 aa31.17■■■□□ 2.58
PCSK4-211ENST00000591303 EID1Q9Y6B2 187 aa31.16■■■□□ 2.58
PCSK4-211ENST00000591303 TET3O43151 1660 aa31.16■■■□□ 2.58
PCSK4-211ENST00000591303 ARHGAP31Q2M1Z3 1444 aa31.15■■■□□ 2.58
PCSK4-211ENST00000591303 LRRC9Q6ZRR7 1453 aa31.14■■■□□ 2.58
PCSK4-211ENST00000591303 KCNA6P17658 529 aa31.13■■■□□ 2.57
PCSK4-211ENST00000591303 PRDM15P57071 1507 aaPredicted RBP31.13■■■□□ 2.57
PCSK4-211ENST00000591303 UPF1Q92900 1129 aaKnown RBP eCLIP31.12■■■□□ 2.57
PCSK4-211ENST00000591303 NWD1Q149M9 1564 aa31.1■■■□□ 2.57
PCSK4-211ENST00000591303 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
PCSK4-211ENST00000591303 PROSER2Q86WR7 435 aaPredicted RBP31.09■■■□□ 2.57
PCSK4-211ENST00000591303 LRP6O75581 1613 aa31.09■■■□□ 2.57
PCSK4-211ENST00000591303 COL16A1Q07092 1604 aaPredicted RBP31.09■■■□□ 2.57
PCSK4-211ENST00000591303 JCADQ9P266 1359 aa31.08■■■□□ 2.57
PCSK4-211ENST00000591303 SLC26A8Q96RN1 970 aa31.08■■■□□ 2.57
PCSK4-211ENST00000591303 DUOX2Q9NRD8 1548 aa31.07■■■□□ 2.56
PCSK4-211ENST00000591303 EFCAB6Q5THR3 1501 aa31.06■■■□□ 2.56
PCSK4-211ENST00000591303 NKTRP30414 1462 aaKnown RBP31.06■■■□□ 2.56
PCSK4-211ENST00000591303 SRCAPQ6ZRS2 3230 aa31.05■■■□□ 2.56
PCSK4-211ENST00000591303 SLAIN2Q9P270 581 aa31.02■■■□□ 2.56
PCSK4-211ENST00000591303 MSH6P52701 1360 aa31■■■□□ 2.55
PCSK4-211ENST00000591303 IDI1Q13907 227 aa30.98■■■□□ 2.55
PCSK4-211ENST00000591303 TRIM52Q96A61 297 aa30.97■■■□□ 2.55
PCSK4-211ENST00000591303 STAG3Q9UJ98 1225 aa30.96■■■□□ 2.55
PCSK4-211ENST00000591303 CHD2O14647 1828 aaKnown RBP30.94■■■□□ 2.54
PCSK4-211ENST00000591303 KIF15Q9NS87 1388 aa30.92■■■□□ 2.54
PCSK4-211ENST00000591303 ERBINQ96RT1 1412 aa30.92■■■□□ 2.54
PCSK4-211ENST00000591303 ADGRB3O60242 1522 aa30.91■■■□□ 2.54
PCSK4-211ENST00000591303 SPATA31A6Q5VVP1 1343 aa30.91■■■□□ 2.54
PCSK4-211ENST00000591303 SHPRHQ149N8 1683 aa30.9■■■□□ 2.54
PCSK4-211ENST00000591303 FGD6Q6ZV73 1430 aa30.9■■■□□ 2.54
PCSK4-211ENST00000591303 ZNF772Q68DY9 489 aaPredicted RBP30.9■■■□□ 2.54
PCSK4-211ENST00000591303 CROCC2H7BZ55 1655 aa30.9■■■□□ 2.54
PCSK4-211ENST00000591303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.89■■■□□ 2.54
PCSK4-211ENST00000591303 MYOM3Q5VTT5 1437 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms