RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 MAGI2Q86UL8 1455 aa23.65■■□□□ 1.38
LSM12-204ENST00000591247 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
LSM12-204ENST00000591247 DCAF11Q8TEB1 546 aa23.64■■□□□ 1.37
LSM12-204ENST00000591247 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.37
LSM12-204ENST00000591247 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
LSM12-204ENST00000591247 ABCA9Q8IUA7 1624 aa23.61■■□□□ 1.37
LSM12-204ENST00000591247 SPAG9O60271 1321 aaKnown RBP23.61■■□□□ 1.37
LSM12-204ENST00000591247 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
LSM12-204ENST00000591247 ZFYVE16Q7Z3T8 1539 aa23.6■■□□□ 1.37
LSM12-204ENST00000591247 ASXL2Q76L83 1435 aa23.59■■□□□ 1.37
LSM12-204ENST00000591247 FANCAO15360 1455 aa23.59■■□□□ 1.37
LSM12-204ENST00000591247 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
LSM12-204ENST00000591247 CARD11Q9BXL7 1154 aa23.58■■□□□ 1.37
LSM12-204ENST00000591247 ANP32EQ9BTT0 268 aa23.57■■□□□ 1.36
LSM12-204ENST00000591247 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
LSM12-204ENST00000591247 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
LSM12-204ENST00000591247 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
LSM12-204ENST00000591247 ATP10AO60312 1499 aa23.53■■□□□ 1.36
LSM12-204ENST00000591247 PRAG1Q86YV5 1406 aa23.53■■□□□ 1.36
LSM12-204ENST00000591247 A2MP01023 1474 aa23.52■■□□□ 1.36
LSM12-204ENST00000591247 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
LSM12-204ENST00000591247 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
LSM12-204ENST00000591247 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
LSM12-204ENST00000591247 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
LSM12-204ENST00000591247 ROCK2O75116 1388 aaKnown RBP23.49■■□□□ 1.35
LSM12-204ENST00000591247 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
LSM12-204ENST00000591247 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
LSM12-204ENST00000591247 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
LSM12-204ENST00000591247 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
LSM12-204ENST00000591247 DHX29Q7Z478 1369 aaKnown RBP23.47■■□□□ 1.35
LSM12-204ENST00000591247 E9PCH4 1651 aa23.46■■□□□ 1.35
LSM12-204ENST00000591247 DEPDC5O75140 1603 aa23.46■■□□□ 1.35
LSM12-204ENST00000591247 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
LSM12-204ENST00000591247 NPM1P06748 294 aaKnown RBP eCLIP23.44■■□□□ 1.34
LSM12-204ENST00000591247 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
LSM12-204ENST00000591247 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
LSM12-204ENST00000591247 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
LSM12-204ENST00000591247 MYT1LQ9UL68 1186 aa23.4■■□□□ 1.34
LSM12-204ENST00000591247 VWDEQ8N2E2 1590 aa23.38■■□□□ 1.33
LSM12-204ENST00000591247 KIF3BO15066 747 aa23.38■■□□□ 1.33
LSM12-204ENST00000591247 TRPM2O94759 1503 aa23.37■■□□□ 1.33
LSM12-204ENST00000591247 PTPRTO14522 1441 aa23.37■■□□□ 1.33
LSM12-204ENST00000591247 KIDINS220Q9ULH0 1771 aa23.36■■□□□ 1.33
LSM12-204ENST00000591247 TET3O43151 1660 aa23.36■■□□□ 1.33
LSM12-204ENST00000591247 SPHKAPQ2M3C7 1700 aa23.35■■□□□ 1.33
LSM12-204ENST00000591247 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
LSM12-204ENST00000591247 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
LSM12-204ENST00000591247 LAMC1P11047 1609 aa23.35■■□□□ 1.33
LSM12-204ENST00000591247 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
LSM12-204ENST00000591247 CD109Q6YHK3 1445 aa23.35■■□□□ 1.33
LSM12-204ENST00000591247 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
LSM12-204ENST00000591247 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
LSM12-204ENST00000591247 CLTCL1P53675 1640 aa23.33■■□□□ 1.32
LSM12-204ENST00000591247 KANK1Q14678 1352 aa23.33■■□□□ 1.32
LSM12-204ENST00000591247 ZNF518AQ6AHZ1 1483 aa23.32■■□□□ 1.32
LSM12-204ENST00000591247 FKBP8Q14318 412 aa23.31■■□□□ 1.32
LSM12-204ENST00000591247 CEP152O94986 1710 aa23.31■■□□□ 1.32
LSM12-204ENST00000591247 TESK2Q96S53 571 aa23.27■■□□□ 1.32
LSM12-204ENST00000591247 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
LSM12-204ENST00000591247 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
LSM12-204ENST00000591247 POGZQ7Z3K3 1410 aa23.27■■□□□ 1.32
LSM12-204ENST00000591247 CFAP74Q9C0B2 1584 aa23.26■■□□□ 1.31
LSM12-204ENST00000591247 BCANQ96GW7 911 aa23.25■■□□□ 1.31
LSM12-204ENST00000591247 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
LSM12-204ENST00000591247 DISP3Q9P2K9 1392 aa23.23■■□□□ 1.31
LSM12-204ENST00000591247 BCL11AQ9H165 835 aa23.23■■□□□ 1.31
LSM12-204ENST00000591247 EFCAB6Q5THR3 1501 aa23.21■■□□□ 1.31
LSM12-204ENST00000591247 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
LSM12-204ENST00000591247 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
LSM12-204ENST00000591247 FRMPD1Q5SYB0 1578 aa23.21■■□□□ 1.31
LSM12-204ENST00000591247 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
LSM12-204ENST00000591247 NEFLP07196 543 aa23.2■■□□□ 1.3
LSM12-204ENST00000591247 ZBED9Q6R2W3 1325 aa23.18■■□□□ 1.3
LSM12-204ENST00000591247 HECW2Q9P2P5 1572 aa23.18■■□□□ 1.3
LSM12-204ENST00000591247 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
LSM12-204ENST00000591247 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
LSM12-204ENST00000591247 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
LSM12-204ENST00000591247 NEURL4Q96JN8 1562 aa23.16■■□□□ 1.3
LSM12-204ENST00000591247 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
LSM12-204ENST00000591247 ABCA6Q8N139 1617 aa23.15■■□□□ 1.3
LSM12-204ENST00000591247 NEO1Q92859 1461 aa23.15■■□□□ 1.3
LSM12-204ENST00000591247 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
LSM12-204ENST00000591247 TMF1P82094 1093 aa23.14■■□□□ 1.29
LSM12-204ENST00000591247 RALBP1Q15311 655 aa23.14■■□□□ 1.29
LSM12-204ENST00000591247 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.29
LSM12-204ENST00000591247 RBM19Q9Y4C8 960 aaKnown RBP23.14■■□□□ 1.29
LSM12-204ENST00000591247 KTN1Q86UP2 1357 aaKnown RBP23.13■■□□□ 1.29
LSM12-204ENST00000591247 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
LSM12-204ENST00000591247 GGT6Q6P531 493 aa23.11■■□□□ 1.29
LSM12-204ENST00000591247 TMC1Q8TDI8 760 aa23.11■■□□□ 1.29
LSM12-204ENST00000591247 KIF1BO60333 1816 aa23.11■■□□□ 1.29
LSM12-204ENST00000591247 CYB5RLQ6IPT4 315 aa23.1■■□□□ 1.29
LSM12-204ENST00000591247 SCAF11Q99590 1463 aaKnown RBP23.1■■□□□ 1.29
LSM12-204ENST00000591247 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
LSM12-204ENST00000591247 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
LSM12-204ENST00000591247 NPATQ14207 1427 aa23.08■■□□□ 1.29
LSM12-204ENST00000591247 BRD4O60885 1362 aaPredicted RBP23.08■■□□□ 1.29
LSM12-204ENST00000591247 PANK3Q9H999 370 aa23.08■■□□□ 1.29
LSM12-204ENST00000591247 MAP3K4Q9Y6R4 1608 aa23.08■■□□□ 1.28
LSM12-204ENST00000591247 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms