RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
NPC1-212ENST00000591107 DMRT2Q9Y5R5 561 aa21.24■□□□□ 0.99
NPC1-212ENST00000591107 CCDC141Q6ZP82 1450 aa21.22■□□□□ 0.99
NPC1-212ENST00000591107 NCKAP5LQ9HCH0 1330 aa21.22■□□□□ 0.99
NPC1-212ENST00000591107 RTEL1-TNFRSF6BF6WH68 1400 aa21.16■□□□□ 0.98
NPC1-212ENST00000591107 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
NPC1-212ENST00000591107 DHX29Q7Z478 1369 aaKnown RBP21.15■□□□□ 0.98
NPC1-212ENST00000591107 ZNF335Q9H4Z2 1342 aaPredicted RBP21.15■□□□□ 0.98
NPC1-212ENST00000591107 VPS8Q8N3P4 1428 aa21.14■□□□□ 0.98
NPC1-212ENST00000591107 DNMT1P26358 1616 aaKnown RBP21.14■□□□□ 0.97
NPC1-212ENST00000591107 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.97
NPC1-212ENST00000591107 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
NPC1-212ENST00000591107 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
NPC1-212ENST00000591107 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
NPC1-212ENST00000591107 ARHGEF5Q12774 1597 aa21.12■□□□□ 0.97
NPC1-212ENST00000591107 KIF3BO15066 747 aa21.12■□□□□ 0.97
NPC1-212ENST00000591107 FBXO31Q5XUX0 539 aaPredicted RBP21.11■□□□□ 0.97
NPC1-212ENST00000591107 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
NPC1-212ENST00000591107 PZPP20742 1482 aa21.08■□□□□ 0.97
NPC1-212ENST00000591107 POLR1AO95602 1720 aaPredicted RBP21.08■□□□□ 0.97
NPC1-212ENST00000591107 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
NPC1-212ENST00000591107 SPATA31D1Q6ZQQ2 1576 aa21.07■□□□□ 0.96
NPC1-212ENST00000591107 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
NPC1-212ENST00000591107 TNRQ92752 1358 aa21.07■□□□□ 0.96
NPC1-212ENST00000591107 DISP3Q9P2K9 1392 aa21.07■□□□□ 0.96
NPC1-212ENST00000591107 IQSEC2Q5JU85 1478 aa21.05■□□□□ 0.96
NPC1-212ENST00000591107 RNF17Q9BXT8 1623 aaKnown RBP21.04■□□□□ 0.96
NPC1-212ENST00000591107 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
NPC1-212ENST00000591107 PKD2Q13563 968 aa21.03■□□□□ 0.96
NPC1-212ENST00000591107 CEP152O94986 1710 aa21.02■□□□□ 0.96
NPC1-212ENST00000591107 MROH1Q8NDA8 1641 aa21.02■□□□□ 0.96
NPC1-212ENST00000591107 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
NPC1-212ENST00000591107 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
NPC1-212ENST00000591107 ABCC3O15438 1527 aa21.01■□□□□ 0.95
NPC1-212ENST00000591107 ILDR2Q71H61 639 aa21.01■□□□□ 0.95
NPC1-212ENST00000591107 HOXD11P31277 338 aaPredicted RBP21■□□□□ 0.95
NPC1-212ENST00000591107 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
NPC1-212ENST00000591107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
NPC1-212ENST00000591107 EIF2AK4Q9P2K8 1649 aaKnown RBP20.97■□□□□ 0.95
NPC1-212ENST00000591107 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
NPC1-212ENST00000591107 UBAP1LF5GYI3 381 aa20.97■□□□□ 0.95
NPC1-212ENST00000591107 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
NPC1-212ENST00000591107 TSPY10P0CW01 314 aa20.97■□□□□ 0.95
NPC1-212ENST00000591107 UGGT1Q9NYU2 1555 aa20.97■□□□□ 0.95
NPC1-212ENST00000591107 CROCC2H7BZ55 1655 aa20.96■□□□□ 0.95
NPC1-212ENST00000591107 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
NPC1-212ENST00000591107 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
NPC1-212ENST00000591107 MIA2Q96PC5 1412 aa20.95■□□□□ 0.94
NPC1-212ENST00000591107 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
NPC1-212ENST00000591107 NLRP1Q9C000 1473 aa20.93■□□□□ 0.94
NPC1-212ENST00000591107 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
NPC1-212ENST00000591107 PTPN23Q9H3S7 1636 aa20.92■□□□□ 0.94
NPC1-212ENST00000591107 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
NPC1-212ENST00000591107 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
NPC1-212ENST00000591107 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.94
NPC1-212ENST00000591107 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.94
NPC1-212ENST00000591107 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
NPC1-212ENST00000591107 DEPDC5O75140 1603 aa20.88■□□□□ 0.93
NPC1-212ENST00000591107 ABCC5O15440 1437 aa20.87■□□□□ 0.93
NPC1-212ENST00000591107 STRCP1A6NGW2 1772 aa20.87■□□□□ 0.93
NPC1-212ENST00000591107 CPS1P31327 1500 aa20.87■□□□□ 0.93
NPC1-212ENST00000591107 PRDM15P57071 1507 aaPredicted RBP20.87■□□□□ 0.93
NPC1-212ENST00000591107 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
NPC1-212ENST00000591107 KIF15Q9NS87 1388 aa20.86■□□□□ 0.93
NPC1-212ENST00000591107 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
NPC1-212ENST00000591107 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
NPC1-212ENST00000591107 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
NPC1-212ENST00000591107 DAPK1P53355 1430 aa20.84■□□□□ 0.93
NPC1-212ENST00000591107 MED14O60244 1454 aa20.83■□□□□ 0.93
NPC1-212ENST00000591107 THEMISQ8N1K5 641 aaPredicted RBP20.82■□□□□ 0.92
NPC1-212ENST00000591107 RRP7BPQ9NSQ0 103 aa20.82■□□□□ 0.92
NPC1-212ENST00000591107 FGD6Q6ZV73 1430 aa20.81■□□□□ 0.92
NPC1-212ENST00000591107 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
NPC1-212ENST00000591107 ZBTB22O15209 634 aa20.8■□□□□ 0.92
NPC1-212ENST00000591107 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
NPC1-212ENST00000591107 HSPA1LP34931 641 aa20.79■□□□□ 0.92
NPC1-212ENST00000591107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■□□□□ 8.7
NPC1-212ENST00000591107 CHIC2Q9UKJ5 165 aa20.78■□□□□ 0.92
NPC1-212ENST00000591107 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
NPC1-212ENST00000591107 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
NPC1-212ENST00000591107 LRRC7Q96NW7 1537 aa20.75■□□□□ 0.91
NPC1-212ENST00000591107 SOCS7O14512 581 aa20.75■□□□□ 0.91
NPC1-212ENST00000591107 APLP2Q06481 763 aa20.75■□□□□ 0.91
NPC1-212ENST00000591107 SYNMO15061 1565 aa20.75■□□□□ 0.91
NPC1-212ENST00000591107 ARHGAP23Q9P227 1491 aa20.73■□□□□ 0.91
NPC1-212ENST00000591107 ARHGAP31Q2M1Z3 1444 aa20.72■□□□□ 0.91
NPC1-212ENST00000591107 SLIT1O75093 1534 aa20.72■□□□□ 0.91
NPC1-212ENST00000591107 LTKP29376 864 aa20.71■□□□□ 0.91
NPC1-212ENST00000591107 TOM1O60784 492 aa20.7■□□□□ 0.9
NPC1-212ENST00000591107 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
NPC1-212ENST00000591107 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
NPC1-212ENST00000591107 ANKRD30AQ9BXX3 1397 aa20.68■□□□□ 0.9
NPC1-212ENST00000591107 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
NPC1-212ENST00000591107 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
NPC1-212ENST00000591107 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
NPC1-212ENST00000591107 KANK1Q14678 1352 aa20.66■□□□□ 0.9
NPC1-212ENST00000591107 ADGRL2O95490 1459 aa20.64■□□□□ 0.89
NPC1-212ENST00000591107 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
NPC1-212ENST00000591107 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
NPC1-212ENST00000591107 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms