RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 SCAF1Q9H7N4 1312 aaKnown RBP28.15■■■□□ 2.1
SPHK1-207ENST00000590959 SIGLEC1Q9BZZ2 1709 aa28.14■■■□□ 2.09
SPHK1-207ENST00000590959 NEUROD1Q13562 356 aa28.13■■■□□ 2.09
SPHK1-207ENST00000590959 SLC4A1APQ9BWU0 796 aaKnown RBP28.13■■■□□ 2.09
SPHK1-207ENST00000590959 TIMELESSQ9UNS1 1208 aa28.12■■■□□ 2.09
SPHK1-207ENST00000590959 PZPP20742 1482 aa28.11■■■□□ 2.09
SPHK1-207ENST00000590959 DIEXFQ68CQ4 756 aaKnown RBP28.1■■■□□ 2.09
SPHK1-207ENST00000590959 ERBINQ96RT1 1412 aa28.1■■■□□ 2.09
SPHK1-207ENST00000590959 KIF3BO15066 747 aa28.08■■■□□ 2.09
SPHK1-207ENST00000590959 NUP155O75694 1391 aa28.07■■■□□ 2.08
SPHK1-207ENST00000590959 KDM5DQ9BY66 1539 aa28.06■■■□□ 2.08
SPHK1-207ENST00000590959 CENPBP07199 599 aaPredicted RBP28.05■■■□□ 2.08
SPHK1-207ENST00000590959 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
SPHK1-207ENST00000590959 FOXD1Q16676 465 aa28.01■■■□□ 2.07
SPHK1-207ENST00000590959 ANKRD30BQ9BXX2 1392 aa28■■■□□ 2.07
SPHK1-207ENST00000590959 GGT6Q6P531 493 aa28■■■□□ 2.07
SPHK1-207ENST00000590959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.078e-8■■■□□ 17.9
SPHK1-207ENST00000590959 EIF2AK4Q9P2K8 1649 aaKnown RBP27.99■■■□□ 2.07
SPHK1-207ENST00000590959 TONSLQ96HA7 1378 aa27.99■■■□□ 2.07
SPHK1-207ENST00000590959 UNC13BO14795 1591 aa27.99■■■□□ 2.07
SPHK1-207ENST00000590959 ARID4BQ4LE39 1312 aaPredicted RBP27.97■■■□□ 2.07
SPHK1-207ENST00000590959 AGLP35573 1532 aa27.97■■■□□ 2.07
SPHK1-207ENST00000590959 PKD2Q13563 968 aa27.97■■■□□ 2.07
SPHK1-207ENST00000590959 MLECQ14165 292 aa27.96■■■□□ 2.07
SPHK1-207ENST00000590959 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
SPHK1-207ENST00000590959 MROH1Q8NDA8 1641 aa27.95■■■□□ 2.07
SPHK1-207ENST00000590959 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
SPHK1-207ENST00000590959 FAM135AQ9P2D6 1515 aa27.94■■■□□ 2.06
SPHK1-207ENST00000590959 DEPDC5O75140 1603 aa27.93■■■□□ 2.06
SPHK1-207ENST00000590959 RNF17Q9BXT8 1623 aaKnown RBP27.92■■■□□ 2.06
SPHK1-207ENST00000590959 PRDM15P57071 1507 aaPredicted RBP27.88■■■□□ 2.05
SPHK1-207ENST00000590959 PPP1R15AO75807 674 aaPredicted RBP27.88■■■□□ 2.05
SPHK1-207ENST00000590959 RPRD2Q5VT52 1461 aaKnown RBP27.87■■■□□ 2.05
SPHK1-207ENST00000590959 IQGAP3Q86VI3 1631 aa27.87■■■□□ 2.05
SPHK1-207ENST00000590959 VWDEQ8N2E2 1590 aa27.84■■■□□ 2.05
SPHK1-207ENST00000590959 WASHC2CQ9Y4E1 1318 aa27.82■■■□□ 2.04
SPHK1-207ENST00000590959 KANK1Q14678 1352 aa27.8■■■□□ 2.04
SPHK1-207ENST00000590959 CEP152O94986 1710 aa27.8■■■□□ 2.04
SPHK1-207ENST00000590959 ABCC3O15438 1527 aa27.78■■■□□ 2.04
SPHK1-207ENST00000590959 L3MBTL2Q969R5 705 aa27.74■■■□□ 2.03
SPHK1-207ENST00000590959 PPP6R1Q9UPN7 881 aa27.73■■■□□ 2.03
SPHK1-207ENST00000590959 CLTCQ00610 1675 aaKnown RBP27.73■■■□□ 2.03
SPHK1-207ENST00000590959 LMTK2Q8IWU2 1503 aa27.73■■■□□ 2.03
SPHK1-207ENST00000590959 TET3O43151 1660 aa27.7■■■□□ 2.03
SPHK1-207ENST00000590959 E9PCH4 1651 aa27.69■■■□□ 2.02
SPHK1-207ENST00000590959 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
SPHK1-207ENST00000590959 CFAP65Q6ZU64 1925 aaKnown RBP27.68■■■□□ 2.02
SPHK1-207ENST00000590959 CAMSAP1Q5T5Y3 1602 aa27.68■■■□□ 2.02
SPHK1-207ENST00000590959 ESF1Q9H501 851 aaKnown RBP27.68■■■□□ 2.02
SPHK1-207ENST00000590959 ADAMTSL3P82987 1691 aa27.67■■■□□ 2.02
SPHK1-207ENST00000590959 NPATQ14207 1427 aa27.67■■■□□ 2.02
SPHK1-207ENST00000590959 FER1L4A9Z1Z3 1794 aa27.67■■■□□ 2.02
SPHK1-207ENST00000590959 EFCAB6Q5THR3 1501 aa27.67■■■□□ 2.02
SPHK1-207ENST00000590959 MADDQ8WXG6 1647 aa27.66■■■□□ 2.02
SPHK1-207ENST00000590959 CCDC144AA2RUR9 1427 aa27.66■■■□□ 2.02
SPHK1-207ENST00000590959 ZMYM3Q14202 1370 aa27.65■■■□□ 2.02
SPHK1-207ENST00000590959 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
SPHK1-207ENST00000590959 CEBPAP49715 358 aaPredicted RBP27.63■■■□□ 2.01
SPHK1-207ENST00000590959 FBXO31Q5XUX0 539 aaPredicted RBP27.62■■■□□ 2.01
SPHK1-207ENST00000590959 ARHGAP31Q2M1Z3 1444 aa27.6■■■□□ 2.01
SPHK1-207ENST00000590959 CNTLNQ9NXG0 1405 aa27.6■■■□□ 2.01
SPHK1-207ENST00000590959 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
SPHK1-207ENST00000590959 RIMS1Q86UR5 1692 aaKnown RBP27.59■■■□□ 2.01
SPHK1-207ENST00000590959 KDM4FA0A1W2PPD8 638 aa27.58■■■□□ 2.01
SPHK1-207ENST00000590959 GTF3C3Q9Y5Q9 886 aa27.56■■■□□ 2
SPHK1-207ENST00000590959 MROH2AA6NES4 1674 aa27.56■■■□□ 2
SPHK1-207ENST00000590959 PTPRTO14522 1441 aa27.54■■■□□ 2
SPHK1-207ENST00000590959 C3P01024 1663 aa27.54■■■□□ 2
SPHK1-207ENST00000590959 TRPM2O94759 1503 aa27.52■■■□□ 2
SPHK1-207ENST00000590959 SPHKAPQ2M3C7 1700 aa27.51■■□□□ 1.99
SPHK1-207ENST00000590959 NOS1P29475 1434 aa27.51■■□□□ 1.99
SPHK1-207ENST00000590959 NBPF8Q3BBV2 869 aa27.51■■□□□ 1.99
SPHK1-207ENST00000590959 PREX1Q8TCU6 1659 aa27.51■■□□□ 1.99
SPHK1-207ENST00000590959 ERVK-7P63135 1459 aa27.5■■□□□ 1.99
SPHK1-207ENST00000590959 UGGT1Q9NYU2 1555 aa27.49■■□□□ 1.99
SPHK1-207ENST00000590959 SYNMO15061 1565 aa27.47■■□□□ 1.99
SPHK1-207ENST00000590959 PTPRMP28827 1452 aa27.47■■□□□ 1.99
SPHK1-207ENST00000590959 SPATA31D1Q6ZQQ2 1576 aa27.45■■□□□ 1.99
SPHK1-207ENST00000590959 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.99
SPHK1-207ENST00000590959 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.99
SPHK1-207ENST00000590959 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
SPHK1-207ENST00000590959 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
SPHK1-207ENST00000590959 IDI1Q13907 227 aa27.41■■□□□ 1.98
SPHK1-207ENST00000590959 ZNF326Q5BKZ1 582 aaKnown RBP27.41■■□□□ 1.98
SPHK1-207ENST00000590959 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
SPHK1-207ENST00000590959 SPATA31E1Q6ZUB1 1445 aa27.4■■□□□ 1.98
SPHK1-207ENST00000590959 TNRQ92752 1358 aa27.39■■□□□ 1.98
SPHK1-207ENST00000590959 EIF4G2P78344 907 aaKnown RBP eCLIP27.38■■□□□ 1.97
SPHK1-207ENST00000590959 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
SPHK1-207ENST00000590959 HIRIP3Q9BW71 556 aaPredicted RBP27.36■■□□□ 1.97
SPHK1-207ENST00000590959 SLC52A1Q9NWF4 448 aa27.34■■□□□ 1.97
SPHK1-207ENST00000590959 HSPA5P11021 654 aaKnown RBP27.33■■□□□ 1.97
SPHK1-207ENST00000590959 MIER1Q8N108 512 aa27.33■■□□□ 1.97
SPHK1-207ENST00000590959 RALGAPBQ86X10 1494 aa27.33■■□□□ 1.97
SPHK1-207ENST00000590959 NEURL4Q96JN8 1562 aa27.33■■□□□ 1.96
SPHK1-207ENST00000590959 PRAG1Q86YV5 1406 aa27.31■■□□□ 1.96
SPHK1-207ENST00000590959 CHGAP10645 457 aaKnown RBP27.31■■□□□ 1.96
SPHK1-207ENST00000590959 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
SPHK1-207ENST00000590959 SETD1BQ9UPS6 1966 aaKnown RBP27.28■■□□□ 1.96
SPHK1-207ENST00000590959 KIF1BO60333 1816 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms