RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
PTBP1-216ENST00000590887 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
PTBP1-216ENST00000590887 PKD2Q13563 968 aa18.74■□□□□ 0.59
PTBP1-216ENST00000590887 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
PTBP1-216ENST00000590887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.592e-8■■□□□ 13.9
PTBP1-216ENST00000590887 KIF3BO15066 747 aa18.73■□□□□ 0.59
PTBP1-216ENST00000590887 IQGAP3Q86VI3 1631 aa18.73■□□□□ 0.59
PTBP1-216ENST00000590887 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
PTBP1-216ENST00000590887 FAM135AQ9P2D6 1515 aa18.72■□□□□ 0.59
PTBP1-216ENST00000590887 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
PTBP1-216ENST00000590887 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
PTBP1-216ENST00000590887 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
PTBP1-216ENST00000590887 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
PTBP1-216ENST00000590887 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
PTBP1-216ENST00000590887 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
PTBP1-216ENST00000590887 DIP2CQ9Y2E4 1556 aa18.65■□□□□ 0.58
PTBP1-216ENST00000590887 ATP10AO60312 1499 aa18.65■□□□□ 0.58
PTBP1-216ENST00000590887 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
PTBP1-216ENST00000590887 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
PTBP1-216ENST00000590887 FOXD1Q16676 465 aa18.63■□□□□ 0.57
PTBP1-216ENST00000590887 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
PTBP1-216ENST00000590887 PRDM15P57071 1507 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-216ENST00000590887 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
PTBP1-216ENST00000590887 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
PTBP1-216ENST00000590887 TET3O43151 1660 aa18.62■□□□□ 0.57
PTBP1-216ENST00000590887 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
PTBP1-216ENST00000590887 VWDEQ8N2E2 1590 aa18.59■□□□□ 0.57
PTBP1-216ENST00000590887 GGT6Q6P531 493 aa18.59■□□□□ 0.57
PTBP1-216ENST00000590887 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
PTBP1-216ENST00000590887 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.57
PTBP1-216ENST00000590887 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
PTBP1-216ENST00000590887 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
PTBP1-216ENST00000590887 AGLP35573 1532 aa18.57■□□□□ 0.56
PTBP1-216ENST00000590887 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
PTBP1-216ENST00000590887 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
PTBP1-216ENST00000590887 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
PTBP1-216ENST00000590887 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.56
PTBP1-216ENST00000590887 E9PCH4 1651 aa18.52■□□□□ 0.56
PTBP1-216ENST00000590887 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
PTBP1-216ENST00000590887 EFCAB6Q5THR3 1501 aa18.5■□□□□ 0.55
PTBP1-216ENST00000590887 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
PTBP1-216ENST00000590887 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
PTBP1-216ENST00000590887 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
PTBP1-216ENST00000590887 PTPRTO14522 1441 aa18.49■□□□□ 0.55
PTBP1-216ENST00000590887 CEP152O94986 1710 aa18.49■□□□□ 0.55
PTBP1-216ENST00000590887 TRPM2O94759 1503 aa18.49■□□□□ 0.55
PTBP1-216ENST00000590887 ABCC3O15438 1527 aa18.47■□□□□ 0.55
PTBP1-216ENST00000590887 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
PTBP1-216ENST00000590887 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
PTBP1-216ENST00000590887 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
PTBP1-216ENST00000590887 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
PTBP1-216ENST00000590887 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
PTBP1-216ENST00000590887 CNTLNQ9NXG0 1405 aa18.43■□□□□ 0.54
PTBP1-216ENST00000590887 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
PTBP1-216ENST00000590887 KIF1BO60333 1816 aa18.41■□□□□ 0.54
PTBP1-216ENST00000590887 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
PTBP1-216ENST00000590887 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.53
PTBP1-216ENST00000590887 NPATQ14207 1427 aa18.39■□□□□ 0.53
PTBP1-216ENST00000590887 SLC52A1Q9NWF4 448 aa18.38■□□□□ 0.53
PTBP1-216ENST00000590887 RGL3Q3MIN7 710 aa18.37■□□□□ 0.53
PTBP1-216ENST00000590887 UHRF1BP1Q6BDS2 1440 aa18.37■□□□□ 0.53
PTBP1-216ENST00000590887 CLTCL1P53675 1640 aa18.35■□□□□ 0.53
PTBP1-216ENST00000590887 MLECQ14165 292 aa18.35■□□□□ 0.53
PTBP1-216ENST00000590887 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
PTBP1-216ENST00000590887 NOS1P29475 1434 aa18.34■□□□□ 0.53
PTBP1-216ENST00000590887 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
PTBP1-216ENST00000590887 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
PTBP1-216ENST00000590887 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
PTBP1-216ENST00000590887 RPGRIP1LQ68CZ1 1315 aa18.33■□□□□ 0.53
PTBP1-216ENST00000590887 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.521e-7■□□□□ 8.1
PTBP1-216ENST00000590887 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
PTBP1-216ENST00000590887 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
PTBP1-216ENST00000590887 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
PTBP1-216ENST00000590887 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
PTBP1-216ENST00000590887 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
PTBP1-216ENST00000590887 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
PTBP1-216ENST00000590887 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
PTBP1-216ENST00000590887 RALGAPBQ86X10 1494 aa18.27■□□□□ 0.52
PTBP1-216ENST00000590887 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
PTBP1-216ENST00000590887 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
PTBP1-216ENST00000590887 PTPRMP28827 1452 aa18.26■□□□□ 0.51
PTBP1-216ENST00000590887 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
PTBP1-216ENST00000590887 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
PTBP1-216ENST00000590887 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
PTBP1-216ENST00000590887 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
PTBP1-216ENST00000590887 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
PTBP1-216ENST00000590887 SPATA31D1Q6ZQQ2 1576 aa18.24■□□□□ 0.51
PTBP1-216ENST00000590887 SYNMO15061 1565 aa18.23■□□□□ 0.51
PTBP1-216ENST00000590887 MYOM2P54296 1465 aa18.23■□□□□ 0.51
PTBP1-216ENST00000590887 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
PTBP1-216ENST00000590887 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-216ENST00000590887 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
PTBP1-216ENST00000590887 IDI1Q13907 227 aa18.22■□□□□ 0.51
PTBP1-216ENST00000590887 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
PTBP1-216ENST00000590887 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
PTBP1-216ENST00000590887 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PTBP1-216ENST00000590887 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
PTBP1-216ENST00000590887 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
PTBP1-216ENST00000590887 LAMC1P11047 1609 aa18.2■□□□□ 0.5
PTBP1-216ENST00000590887 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms