RNA–Protein interactions for RNA: ENST00000590684.5

TCF3-215, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-215ENST00000590684 RNF17Q9BXT8 1623 aaKnown RBP25.33■■□□□ 1.65
TCF3-215ENST00000590684 NCOA1Q15788 1441 aa25.33■■□□□ 1.65
TCF3-215ENST00000590684 ABCC5O15440 1437 aa25.32■■□□□ 1.64
TCF3-215ENST00000590684 TCOF1Q13428 1488 aaKnown RBP25.32■■□□□ 1.64
TCF3-215ENST00000590684 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
TCF3-215ENST00000590684 FBXO41Q8TF61 875 aa25.32■■□□□ 1.64
TCF3-215ENST00000590684 CEP170BQ9Y4F5 1589 aaPredicted RBP25.32■■□□□ 1.64
TCF3-215ENST00000590684 CAMSAP1Q5T5Y3 1602 aa25.32■■□□□ 1.64
TCF3-215ENST00000590684 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
TCF3-215ENST00000590684 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
TCF3-215ENST00000590684 PZPP20742 1482 aa25.29■■□□□ 1.64
TCF3-215ENST00000590684 PTPRTO14522 1441 aa25.29■■□□□ 1.64
TCF3-215ENST00000590684 DNMT1P26358 1616 aaKnown RBP25.29■■□□□ 1.64
TCF3-215ENST00000590684 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
TCF3-215ENST00000590684 MROH1Q8NDA8 1641 aa25.27■■□□□ 1.64
TCF3-215ENST00000590684 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
TCF3-215ENST00000590684 DAPK1P53355 1430 aa25.27■■□□□ 1.64
TCF3-215ENST00000590684 FBXO31Q5XUX0 539 aaPredicted RBP25.25■■□□□ 1.63
TCF3-215ENST00000590684 ABCC3O15438 1527 aa25.25■■□□□ 1.63
TCF3-215ENST00000590684 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
TCF3-215ENST00000590684 PLA2R1Q13018 1463 aa25.24■■□□□ 1.63
TCF3-215ENST00000590684 ZC3H13Q5T200 1668 aaKnown RBP25.23■■□□□ 1.63
TCF3-215ENST00000590684 CERKQ8TCT0 537 aa25.23■■□□□ 1.63
TCF3-215ENST00000590684 A2ML1A8K2U0 1454 aa25.23■■□□□ 1.63
TCF3-215ENST00000590684 TNRQ92752 1358 aa25.22■■□□□ 1.63
TCF3-215ENST00000590684 ERBINQ96RT1 1412 aa25.19■■□□□ 1.62
TCF3-215ENST00000590684 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
TCF3-215ENST00000590684 NCKAP5LQ9HCH0 1330 aa25.18■■□□□ 1.62
TCF3-215ENST00000590684 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
TCF3-215ENST00000590684 CEP152O94986 1710 aa25.16■■□□□ 1.62
TCF3-215ENST00000590684 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.61
TCF3-215ENST00000590684 LTBP4Q8N2S1 1624 aa25.13■■□□□ 1.61
TCF3-215ENST00000590684 NLRP1Q9C000 1473 aa25.13■■□□□ 1.61
TCF3-215ENST00000590684 DEPDC5O75140 1603 aa25.13■■□□□ 1.61
TCF3-215ENST00000590684 ANKRD30AQ9BXX3 1397 aa25.13■■□□□ 1.61
TCF3-215ENST00000590684 PKD2Q13563 968 aa25.12■■□□□ 1.61
TCF3-215ENST00000590684 CHIC2Q9UKJ5 165 aa25.12■■□□□ 1.61
TCF3-215ENST00000590684 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
TCF3-215ENST00000590684 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
TCF3-215ENST00000590684 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
TCF3-215ENST00000590684 UGGT1Q9NYU2 1555 aa25.08■■□□□ 1.6
TCF3-215ENST00000590684 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
TCF3-215ENST00000590684 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
TCF3-215ENST00000590684 ARHGAP31Q2M1Z3 1444 aa25.05■■□□□ 1.6
TCF3-215ENST00000590684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.64e-6■□□□□ 8.2
TCF3-215ENST00000590684 VWDEQ8N2E2 1590 aa25.03■■□□□ 1.6
TCF3-215ENST00000590684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.6
TCF3-215ENST00000590684 ZNF335Q9H4Z2 1342 aaPredicted RBP25.03■■□□□ 1.6
TCF3-215ENST00000590684 LMTK2Q8IWU2 1503 aa25■■□□□ 1.59
TCF3-215ENST00000590684 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
TCF3-215ENST00000590684 KANK1Q14678 1352 aa24.99■■□□□ 1.59
TCF3-215ENST00000590684 IQSEC2Q5JU85 1478 aa24.99■■□□□ 1.59
TCF3-215ENST00000590684 CFAP65Q6ZU64 1925 aaKnown RBP24.97■■□□□ 1.59
TCF3-215ENST00000590684 ANKRD50Q9ULJ7 1429 aa24.97■■□□□ 1.59
TCF3-215ENST00000590684 UBR1Q8IWV7 1749 aa24.96■■□□□ 1.59
TCF3-215ENST00000590684 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
TCF3-215ENST00000590684 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
TCF3-215ENST00000590684 MED14O60244 1454 aa24.95■■□□□ 1.58
TCF3-215ENST00000590684 EFCAB6Q5THR3 1501 aa24.93■■□□□ 1.58
TCF3-215ENST00000590684 NPHP4O75161 1426 aaPredicted RBP24.92■■□□□ 1.58
TCF3-215ENST00000590684 IQGAP1P46940 1657 aa24.9■■□□□ 1.58
TCF3-215ENST00000590684 PIK3C2BO00750 1634 aa24.89■■□□□ 1.58
TCF3-215ENST00000590684 ROCK1Q13464 1354 aa24.89■■□□□ 1.57
TCF3-215ENST00000590684 SYNMO15061 1565 aa24.88■■□□□ 1.57
TCF3-215ENST00000590684 ARHGAP23Q9P227 1491 aa24.87■■□□□ 1.57
TCF3-215ENST00000590684 SLIT1O75093 1534 aa24.87■■□□□ 1.57
TCF3-215ENST00000590684 UNC13BO14795 1591 aa24.86■■□□□ 1.57
TCF3-215ENST00000590684 NOS1P29475 1434 aa24.86■■□□□ 1.57
TCF3-215ENST00000590684 SCAF11Q99590 1463 aaKnown RBP24.84■■□□□ 1.57
TCF3-215ENST00000590684 CPS1P31327 1500 aa24.84■■□□□ 1.57
TCF3-215ENST00000590684 TET3O43151 1660 aa24.82■■□□□ 1.56
TCF3-215ENST00000590684 KDM5AP29375 1690 aaKnown RBP24.82■■□□□ 1.56
TCF3-215ENST00000590684 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
TCF3-215ENST00000590684 ITGAEP38570 1179 aa24.81■■□□□ 1.56
TCF3-215ENST00000590684 IDI1Q13907 227 aa24.81■■□□□ 1.56
TCF3-215ENST00000590684 LTKP29376 864 aa24.8■■□□□ 1.56
TCF3-215ENST00000590684 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
TCF3-215ENST00000590684 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
TCF3-215ENST00000590684 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
TCF3-215ENST00000590684 ADGRB3O60242 1522 aa24.77■■□□□ 1.56
TCF3-215ENST00000590684 TXNDC2Q86VQ3 553 aa24.76■■□□□ 1.55
TCF3-215ENST00000590684 STRCP1A6NGW2 1772 aa24.76■■□□□ 1.55
TCF3-215ENST00000590684 IQGAP3Q86VI3 1631 aa24.76■■□□□ 1.55
TCF3-215ENST00000590684 UBAP1LF5GYI3 381 aa24.74■■□□□ 1.55
TCF3-215ENST00000590684 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
TCF3-215ENST00000590684 E9PCH4 1651 aa24.73■■□□□ 1.55
TCF3-215ENST00000590684 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
TCF3-215ENST00000590684 EID1Q9Y6B2 187 aa24.72■■□□□ 1.55
TCF3-215ENST00000590684 NUP155O75694 1391 aa24.68■■□□□ 1.54
TCF3-215ENST00000590684 LRRC7Q96NW7 1537 aa24.67■■□□□ 1.54
TCF3-215ENST00000590684 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
TCF3-215ENST00000590684 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
TCF3-215ENST00000590684 MYO5BQ9ULV0 1848 aa24.64■■□□□ 1.53
TCF3-215ENST00000590684 ZFYVE9O95405 1425 aa24.62■■□□□ 1.53
TCF3-215ENST00000590684 NAIPQ13075 1403 aa24.61■■□□□ 1.53
TCF3-215ENST00000590684 TOM1O60784 492 aa24.6■■□□□ 1.53
TCF3-215ENST00000590684 PIP4K2BP78356 416 aa24.58■■□□□ 1.52
TCF3-215ENST00000590684 RIMS2Q9UQ26 1411 aa24.57■■□□□ 1.52
TCF3-215ENST00000590684 SLC26A8Q96RN1 970 aa24.56■■□□□ 1.52
TCF3-215ENST00000590684 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms