RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 KDM5DQ9BY66 1539 aa24.81■■□□□ 1.56
GCDH-211ENST00000590472 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
GCDH-211ENST00000590472 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
GCDH-211ENST00000590472 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
GCDH-211ENST00000590472 KIF15Q9NS87 1388 aa24.78■■□□□ 1.56
GCDH-211ENST00000590472 MROH1Q8NDA8 1641 aa24.77■■□□□ 1.56
GCDH-211ENST00000590472 RRP7BPQ9NSQ0 103 aa24.75■■□□□ 1.55
GCDH-211ENST00000590472 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
GCDH-211ENST00000590472 WASHC2CQ9Y4E1 1318 aa24.74■■□□□ 1.55
GCDH-211ENST00000590472 MYO3AQ8NEV4 1616 aa24.73■■□□□ 1.55
GCDH-211ENST00000590472 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
GCDH-211ENST00000590472 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
GCDH-211ENST00000590472 CHIC2Q9UKJ5 165 aa24.73■■□□□ 1.55
GCDH-211ENST00000590472 STRCQ7RTU9 1775 aa24.72■■□□□ 1.55
GCDH-211ENST00000590472 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
GCDH-211ENST00000590472 NCOA1Q15788 1441 aa24.71■■□□□ 1.55
GCDH-211ENST00000590472 ANKRD30AQ9BXX3 1397 aa24.71■■□□□ 1.55
GCDH-211ENST00000590472 ABCC3O15438 1527 aa24.71■■□□□ 1.55
GCDH-211ENST00000590472 ADGRL2O95490 1459 aa24.7■■□□□ 1.55
GCDH-211ENST00000590472 PZPP20742 1482 aa24.7■■□□□ 1.55
GCDH-211ENST00000590472 ZNF142P52746 1687 aaPredicted RBP24.7■■□□□ 1.54
GCDH-211ENST00000590472 PRDM15P57071 1507 aaPredicted RBP24.68■■□□□ 1.54
GCDH-211ENST00000590472 FBXO31Q5XUX0 539 aaPredicted RBP24.67■■□□□ 1.54
GCDH-211ENST00000590472 DEPDC5O75140 1603 aa24.67■■□□□ 1.54
GCDH-211ENST00000590472 CEP170BQ9Y4F5 1589 aaPredicted RBP24.67■■□□□ 1.54
GCDH-211ENST00000590472 CEP152O94986 1710 aa24.66■■□□□ 1.54
GCDH-211ENST00000590472 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
GCDH-211ENST00000590472 TNRQ92752 1358 aa24.62■■□□□ 1.53
GCDH-211ENST00000590472 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
GCDH-211ENST00000590472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.53
GCDH-211ENST00000590472 SPATA31D1Q6ZQQ2 1576 aa24.58■■□□□ 1.52
GCDH-211ENST00000590472 VWDEQ8N2E2 1590 aa24.57■■□□□ 1.52
GCDH-211ENST00000590472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
GCDH-211ENST00000590472 DMRT2Q9Y5R5 561 aa24.56■■□□□ 1.52
GCDH-211ENST00000590472 PTPRTO14522 1441 aa24.55■■□□□ 1.52
GCDH-211ENST00000590472 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
GCDH-211ENST00000590472 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
GCDH-211ENST00000590472 PLA2R1Q13018 1463 aa24.55■■□□□ 1.52
GCDH-211ENST00000590472 ARHGAP31Q2M1Z3 1444 aa24.54■■□□□ 1.52
GCDH-211ENST00000590472 ROCK1Q13464 1354 aa24.54■■□□□ 1.52
GCDH-211ENST00000590472 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
GCDH-211ENST00000590472 LMTK2Q8IWU2 1503 aa24.53■■□□□ 1.52
GCDH-211ENST00000590472 KANK1Q14678 1352 aa24.53■■□□□ 1.52
GCDH-211ENST00000590472 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
GCDH-211ENST00000590472 CFAP65Q6ZU64 1925 aaKnown RBP24.52■■□□□ 1.52
GCDH-211ENST00000590472 NCKAP5LQ9HCH0 1330 aa24.5■■□□□ 1.51
GCDH-211ENST00000590472 ITGAEP38570 1179 aa24.49■■□□□ 1.51
GCDH-211ENST00000590472 ILDR1Q86SU0 546 aaPredicted RBP24.49■■□□□ 1.51
GCDH-211ENST00000590472 UGGT1Q9NYU2 1555 aa24.47■■□□□ 1.51
GCDH-211ENST00000590472 PKD2Q13563 968 aa24.46■■□□□ 1.51
GCDH-211ENST00000590472 UNC13BO14795 1591 aa24.46■■□□□ 1.51
GCDH-211ENST00000590472 EFCAB6Q5THR3 1501 aa24.45■■□□□ 1.5
GCDH-211ENST00000590472 POLR1AO95602 1720 aaPredicted RBP24.44■■□□□ 1.5
GCDH-211ENST00000590472 THEMISQ8N1K5 641 aaPredicted RBP24.42■■□□□ 1.5
GCDH-211ENST00000590472 NEURL4Q96JN8 1562 aa24.41■■□□□ 1.5
GCDH-211ENST00000590472 UBR1Q8IWV7 1749 aa24.41■■□□□ 1.5
GCDH-211ENST00000590472 CERKQ8TCT0 537 aa24.4■■□□□ 1.5
GCDH-211ENST00000590472 TET3O43151 1660 aa24.39■■□□□ 1.49
GCDH-211ENST00000590472 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
GCDH-211ENST00000590472 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
GCDH-211ENST00000590472 SYNMO15061 1565 aa24.37■■□□□ 1.49
GCDH-211ENST00000590472 NOS1P29475 1434 aa24.36■■□□□ 1.49
GCDH-211ENST00000590472 GCC2Q8IWJ2 1684 aa24.36■■□□□ 1.49
GCDH-211ENST00000590472 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
GCDH-211ENST00000590472 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
GCDH-211ENST00000590472 RPRD2Q5VT52 1461 aaKnown RBP24.34■■□□□ 1.49
GCDH-211ENST00000590472 ANKLE2Q86XL3 938 aa24.34■■□□□ 1.49
GCDH-211ENST00000590472 MED14O60244 1454 aa24.32■■□□□ 1.48
GCDH-211ENST00000590472 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
GCDH-211ENST00000590472 E9PCH4 1651 aa24.3■■□□□ 1.48
GCDH-211ENST00000590472 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
GCDH-211ENST00000590472 NAIPQ13075 1403 aa24.29■■□□□ 1.48
GCDH-211ENST00000590472 IDI1Q13907 227 aa24.29■■□□□ 1.48
GCDH-211ENST00000590472 ARHGAP23Q9P227 1491 aa24.29■■□□□ 1.48
GCDH-211ENST00000590472 SLIT1O75093 1534 aa24.29■■□□□ 1.48
GCDH-211ENST00000590472 NUP155O75694 1391 aa24.29■■□□□ 1.48
GCDH-211ENST00000590472 NPHP4O75161 1426 aaPredicted RBP24.28■■□□□ 1.48
GCDH-211ENST00000590472 IQGAP1P46940 1657 aa24.27■■□□□ 1.48
GCDH-211ENST00000590472 ADGRB3O60242 1522 aa24.24■■□□□ 1.47
GCDH-211ENST00000590472 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
GCDH-211ENST00000590472 TMEM2Q9UHN6 1383 aa24.23■■□□□ 1.47
GCDH-211ENST00000590472 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
GCDH-211ENST00000590472 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
GCDH-211ENST00000590472 LTKP29376 864 aa24.22■■□□□ 1.47
GCDH-211ENST00000590472 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
GCDH-211ENST00000590472 STAG3Q9UJ98 1225 aa24.21■■□□□ 1.47
GCDH-211ENST00000590472 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
GCDH-211ENST00000590472 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
GCDH-211ENST00000590472 TMEM131LA2VDJ0 1609 aa24.17■■□□□ 1.46
GCDH-211ENST00000590472 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
GCDH-211ENST00000590472 CPS1P31327 1500 aa24.14■■□□□ 1.45
GCDH-211ENST00000590472 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
GCDH-211ENST00000590472 STRCP1A6NGW2 1772 aa24.12■■□□□ 1.45
GCDH-211ENST00000590472 ZFYVE9O95405 1425 aa24.1■■□□□ 1.45
GCDH-211ENST00000590472 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
GCDH-211ENST00000590472 RIMS2Q9UQ26 1411 aa24.06■■□□□ 1.44
GCDH-211ENST00000590472 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
GCDH-211ENST00000590472 TRPM2O94759 1503 aa24.03■■□□□ 1.44
GCDH-211ENST00000590472 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
GCDH-211ENST00000590472 CLTCL1P53675 1640 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms