RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
LRP3-203ENST00000590278 KIF14Q15058 1648 aa19.49■□□□□ 0.71
LRP3-203ENST00000590278 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
LRP3-203ENST00000590278 KDM5CP41229 1560 aa19.48■□□□□ 0.71
LRP3-203ENST00000590278 NEFMP07197 916 aa19.47■□□□□ 0.71
LRP3-203ENST00000590278 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
LRP3-203ENST00000590278 TCERG1O14776 1098 aaKnown RBP19.46■□□□□ 0.71
LRP3-203ENST00000590278 RALGAPBQ86X10 1494 aa19.45■□□□□ 0.7
LRP3-203ENST00000590278 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
LRP3-203ENST00000590278 PANK3Q9H999 370 aa19.45■□□□□ 0.7
LRP3-203ENST00000590278 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
LRP3-203ENST00000590278 CRBNQ96SW2 442 aa19.44■□□□□ 0.7
LRP3-203ENST00000590278 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
LRP3-203ENST00000590278 CARMIL2Q6F5E8 1435 aa19.43■□□□□ 0.7
LRP3-203ENST00000590278 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
LRP3-203ENST00000590278 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
LRP3-203ENST00000590278 UHRF1BP1Q6BDS2 1440 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 SLC4A3P48751 1232 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 PDE3BQ13370 1112 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 DAXXQ9UER7 740 aaPredicted RBP19.38■□□□□ 0.69
LRP3-203ENST00000590278 ADGRL2O95490 1459 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 BACH2Q9BYV9 841 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
LRP3-203ENST00000590278 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
LRP3-203ENST00000590278 ADGBQ8N7X0 1667 aa19.36■□□□□ 0.69
LRP3-203ENST00000590278 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
LRP3-203ENST00000590278 TMF1P82094 1093 aa19.35■□□□□ 0.69
LRP3-203ENST00000590278 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
LRP3-203ENST00000590278 PER1O15534 1290 aaPredicted RBP19.34■□□□□ 0.69
LRP3-203ENST00000590278 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
LRP3-203ENST00000590278 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
LRP3-203ENST00000590278 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
LRP3-203ENST00000590278 RGS3P49796 1198 aa19.32■□□□□ 0.68
LRP3-203ENST00000590278 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
LRP3-203ENST00000590278 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
LRP3-203ENST00000590278 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
LRP3-203ENST00000590278 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
LRP3-203ENST00000590278 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
LRP3-203ENST00000590278 ATP10BO94823 1461 aa19.29■□□□□ 0.68
LRP3-203ENST00000590278 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
LRP3-203ENST00000590278 MS4A1P11836 297 aa19.28■□□□□ 0.68
LRP3-203ENST00000590278 PRAG1Q86YV5 1406 aa19.28■□□□□ 0.68
LRP3-203ENST00000590278 TESK2Q96S53 571 aa19.27■□□□□ 0.68
LRP3-203ENST00000590278 CEP170Q5SW79 1584 aa19.27■□□□□ 0.67
LRP3-203ENST00000590278 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
LRP3-203ENST00000590278 CROCC2H7BZ55 1655 aa19.25■□□□□ 0.67
LRP3-203ENST00000590278 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
LRP3-203ENST00000590278 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
LRP3-203ENST00000590278 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
LRP3-203ENST00000590278 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
LRP3-203ENST00000590278 PTPRGP23470 1445 aa19.21■□□□□ 0.67
LRP3-203ENST00000590278 CDC42BPAQ5VT25 1732 aa19.21■□□□□ 0.67
LRP3-203ENST00000590278 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
LRP3-203ENST00000590278 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
LRP3-203ENST00000590278 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
LRP3-203ENST00000590278 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
LRP3-203ENST00000590278 GOLGA2Q08379 1002 aa19.2■□□□□ 0.66
LRP3-203ENST00000590278 A2MP01023 1474 aa19.18■□□□□ 0.66
LRP3-203ENST00000590278 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
LRP3-203ENST00000590278 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
LRP3-203ENST00000590278 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
LRP3-203ENST00000590278 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
LRP3-203ENST00000590278 ANO8Q9HCE9 1232 aaPredicted RBP19.16■□□□□ 0.66
LRP3-203ENST00000590278 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
LRP3-203ENST00000590278 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
LRP3-203ENST00000590278 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
LRP3-203ENST00000590278 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
LRP3-203ENST00000590278 WASHC2CQ9Y4E1 1318 aa19.16■□□□□ 0.66
LRP3-203ENST00000590278 APAF1O14727 1248 aa19.15■□□□□ 0.66
LRP3-203ENST00000590278 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
LRP3-203ENST00000590278 DUSP27Q5VZP5 1158 aa19.15■□□□□ 0.66
LRP3-203ENST00000590278 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
LRP3-203ENST00000590278 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
LRP3-203ENST00000590278 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
LRP3-203ENST00000590278 NFKBIBQ15653 356 aa19.14■□□□□ 0.65
LRP3-203ENST00000590278 PLA2R1Q13018 1463 aa19.13■□□□□ 0.65
LRP3-203ENST00000590278 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
LRP3-203ENST00000590278 BCAR3O75815 825 aa19.13■□□□□ 0.65
LRP3-203ENST00000590278 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
LRP3-203ENST00000590278 FAM161AQ3B820 660 aa19.12■□□□□ 0.65
LRP3-203ENST00000590278 BLMP54132 1417 aaPredicted RBP19.12■□□□□ 0.65
LRP3-203ENST00000590278 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
LRP3-203ENST00000590278 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
LRP3-203ENST00000590278 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
LRP3-203ENST00000590278 E9PCH4 1651 aa19.1■□□□□ 0.65
LRP3-203ENST00000590278 ABCA8O94911 1581 aa19.1■□□□□ 0.65
LRP3-203ENST00000590278 NUP160Q12769 1436 aa19.09■□□□□ 0.65
LRP3-203ENST00000590278 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
LRP3-203ENST00000590278 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
LRP3-203ENST00000590278 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
LRP3-203ENST00000590278 GSE1Q14687 1217 aa19.08■□□□□ 0.65
LRP3-203ENST00000590278 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.64
LRP3-203ENST00000590278 CDCA8Q53HL2 280 aa19.07■□□□□ 0.64
LRP3-203ENST00000590278 AMER1Q5JTC6 1135 aaPredicted RBP19.07■□□□□ 0.64
LRP3-203ENST00000590278 KDM2BQ8NHM5 1336 aa19.07■□□□□ 0.64
LRP3-203ENST00000590278 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
LRP3-203ENST00000590278 MAGI2Q86UL8 1455 aa19.05■□□□□ 0.64
LRP3-203ENST00000590278 C8orf34Q49A92 452 aa19.05■□□□□ 0.64
LRP3-203ENST00000590278 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
LRP3-203ENST00000590278 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms