RNA–Protein interactions for RNA: ENST00000590220.1

PIK3C3-213, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-213ENST00000590220 FMN1Q68DA7 1419 aa9.71□□□□□ -0.86
PIK3C3-213ENST00000590220 NLRP1Q9C000 1473 aa9.71□□□□□ -0.86
PIK3C3-213ENST00000590220 PZPP20742 1482 aa9.7□□□□□ -0.86
PIK3C3-213ENST00000590220 UGGT1Q9NYU2 1555 aa9.7□□□□□ -0.86
PIK3C3-213ENST00000590220 ROBO1Q9Y6N7 1651 aa9.7□□□□□ -0.86
PIK3C3-213ENST00000590220 THEMISQ8N1K5 641 aaPredicted RBP9.69□□□□□ -0.86
PIK3C3-213ENST00000590220 TNRQ92752 1358 aa9.69□□□□□ -0.86
PIK3C3-213ENST00000590220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
PIK3C3-213ENST00000590220 SYCP2Q9BX26 1530 aa9.68□□□□□ -0.86
PIK3C3-213ENST00000590220 KIAA1107Q9UPP5 1409 aa9.67□□□□□ -0.86
PIK3C3-213ENST00000590220 SPAG9O60271 1321 aaKnown RBP9.67□□□□□ -0.86
PIK3C3-213ENST00000590220 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
PIK3C3-213ENST00000590220 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
PIK3C3-213ENST00000590220 GGT6Q6P531 493 aa9.66□□□□□ -0.86
PIK3C3-213ENST00000590220 MIA2Q96PC5 1412 aa9.65□□□□□ -0.86
PIK3C3-213ENST00000590220 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
PIK3C3-213ENST00000590220 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.86
PIK3C3-213ENST00000590220 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.87
PIK3C3-213ENST00000590220 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
PIK3C3-213ENST00000590220 FBXO31Q5XUX0 539 aaPredicted RBP9.63□□□□□ -0.87
PIK3C3-213ENST00000590220 PLEKHH2Q8IVE3 1493 aa9.63□□□□□ -0.87
PIK3C3-213ENST00000590220 EEA1Q15075 1411 aa9.63□□□□□ -0.87
PIK3C3-213ENST00000590220 CFAP65Q6ZU64 1925 aaKnown RBP9.62□□□□□ -0.87
PIK3C3-213ENST00000590220 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
PIK3C3-213ENST00000590220 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
PIK3C3-213ENST00000590220 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
PIK3C3-213ENST00000590220 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
PIK3C3-213ENST00000590220 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
PIK3C3-213ENST00000590220 CCDC18Q5T9S5 1454 aa9.61□□□□□ -0.87
PIK3C3-213ENST00000590220 MAP3K1Q13233 1512 aa9.61□□□□□ -0.87
PIK3C3-213ENST00000590220 ARHGAP23Q9P227 1491 aa9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 RTEL1-TNFRSF6BF6WH68 1400 aa9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 HNRNPMP52272 730 aaKnown RBP eCLIP9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 SLIT1O75093 1534 aa9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 DHX29Q7Z478 1369 aaKnown RBP9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 JCADQ9P266 1359 aa9.6□□□□□ -0.87
PIK3C3-213ENST00000590220 ZNF772Q68DY9 489 aaPredicted RBP9.59□□□□□ -0.87
PIK3C3-213ENST00000590220 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
PIK3C3-213ENST00000590220 LRP6O75581 1613 aa9.58□□□□□ -0.88
PIK3C3-213ENST00000590220 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
PIK3C3-213ENST00000590220 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
PIK3C3-213ENST00000590220 KDM5AP29375 1690 aaKnown RBP9.57□□□□□ -0.88
PIK3C3-213ENST00000590220 SPATA31A6Q5VVP1 1343 aa9.56□□□□□ -0.88
PIK3C3-213ENST00000590220 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
PIK3C3-213ENST00000590220 MBD5Q9P267 1494 aa9.56□□□□□ -0.88
PIK3C3-213ENST00000590220 CASKIN1Q8WXD9 1431 aa9.56□□□□□ -0.88
PIK3C3-213ENST00000590220 TIAM1Q13009 1591 aa9.55□□□□□ -0.88
PIK3C3-213ENST00000590220 NWD1Q149M9 1564 aa9.55□□□□□ -0.88
PIK3C3-213ENST00000590220 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
PIK3C3-213ENST00000590220 ABCC3O15438 1527 aa9.55□□□□□ -0.88
PIK3C3-213ENST00000590220 CAMSAP2Q08AD1 1489 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 RXRBP28702 533 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 PRDM15P57071 1507 aaPredicted RBP9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 TET3O43151 1660 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 CHD2O14647 1828 aaKnown RBP9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 WASHC2CQ9Y4E1 1318 aa9.54□□□□□ -0.88
PIK3C3-213ENST00000590220 AHDC1Q5TGY3 1603 aaPredicted RBP9.53□□□□□ -0.88
PIK3C3-213ENST00000590220 LTKP29376 864 aa9.53□□□□□ -0.88
PIK3C3-213ENST00000590220 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
PIK3C3-213ENST00000590220 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
PIK3C3-213ENST00000590220 KIF3BO15066 747 aa9.52□□□□□ -0.89
PIK3C3-213ENST00000590220 SETBP1Q9Y6X0 1596 aa9.52□□□□□ -0.89
PIK3C3-213ENST00000590220 CEP152O94986 1710 aa9.51□□□□□ -0.89
PIK3C3-213ENST00000590220 DIP2AQ14689 1571 aa9.51□□□□□ -0.89
PIK3C3-213ENST00000590220 LRP5O75197 1615 aa9.51□□□□□ -0.89
PIK3C3-213ENST00000590220 EIF2AK4Q9P2K8 1649 aaKnown RBP9.5□□□□□ -0.89
PIK3C3-213ENST00000590220 KCNA6P17658 529 aa9.5□□□□□ -0.89
PIK3C3-213ENST00000590220 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
PIK3C3-213ENST00000590220 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
PIK3C3-213ENST00000590220 EP400Q96L91 3159 aa9.5□□□□□ -0.89
PIK3C3-213ENST00000590220 RGS12O14924 1447 aa9.49□□□□□ -0.89
PIK3C3-213ENST00000590220 FOXD1Q16676 465 aa9.49□□□□□ -0.89
PIK3C3-213ENST00000590220 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
PIK3C3-213ENST00000590220 PIK3C2BO00750 1634 aa9.49□□□□□ -0.89
PIK3C3-213ENST00000590220 MROH1Q8NDA8 1641 aa9.49□□□□□ -0.89
PIK3C3-213ENST00000590220 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
PIK3C3-213ENST00000590220 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
PIK3C3-213ENST00000590220 MSH6P52701 1360 aa9.48□□□□□ -0.89
PIK3C3-213ENST00000590220 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
PIK3C3-213ENST00000590220 MEX3CQ5U5Q3 659 aaKnown RBP9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 CCNB3Q8WWL7 1395 aa9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 TMEM2Q9UHN6 1383 aa9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 NCOA3Q9Y6Q9 1424 aa9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
PIK3C3-213ENST00000590220 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
PIK3C3-213ENST00000590220 EID1Q9Y6B2 187 aa9.45□□□□□ -0.9
PIK3C3-213ENST00000590220 ARHGAP31Q2M1Z3 1444 aa9.45□□□□□ -0.9
PIK3C3-213ENST00000590220 ARHGEF5Q12774 1597 aa9.45□□□□□ -0.9
PIK3C3-213ENST00000590220 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
PIK3C3-213ENST00000590220 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
PIK3C3-213ENST00000590220 ZNF644Q9H582 1327 aaPredicted RBP9.44□□□□□ -0.9
PIK3C3-213ENST00000590220 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
PIK3C3-213ENST00000590220 AFF2P51816 1311 aa9.43□□□□□ -0.9
PIK3C3-213ENST00000590220 MAST1Q9Y2H9 1570 aa9.42□□□□□ -0.9
PIK3C3-213ENST00000590220 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
PIK3C3-213ENST00000590220 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms