RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 MSH5O43196 834 aa14.36□□□□□ -0.11
HMGN1P31-201ENST00000590085 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
HMGN1P31-201ENST00000590085 DHX29Q7Z478 1369 aaKnown RBP14.35□□□□□ -0.11
HMGN1P31-201ENST00000590085 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
HMGN1P31-201ENST00000590085 CEP152O94986 1710 aa14.35□□□□□ -0.11
HMGN1P31-201ENST00000590085 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
HMGN1P31-201ENST00000590085 NCOA1Q15788 1441 aa14.34□□□□□ -0.11
HMGN1P31-201ENST00000590085 ERBINQ96RT1 1412 aa14.34□□□□□ -0.11
HMGN1P31-201ENST00000590085 PRDM15P57071 1507 aaPredicted RBP14.34□□□□□ -0.11
HMGN1P31-201ENST00000590085 ANKRD30AQ9BXX3 1397 aa14.33□□□□□ -0.12
HMGN1P31-201ENST00000590085 PTPRMP28827 1452 aa14.32□□□□□ -0.12
HMGN1P31-201ENST00000590085 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
HMGN1P31-201ENST00000590085 UNC13BO14795 1591 aa14.31□□□□□ -0.12
HMGN1P31-201ENST00000590085 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
HMGN1P31-201ENST00000590085 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
HMGN1P31-201ENST00000590085 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
HMGN1P31-201ENST00000590085 MLECQ14165 292 aa14.28□□□□□ -0.12
HMGN1P31-201ENST00000590085 CNTLNQ9NXG0 1405 aa14.28□□□□□ -0.12
HMGN1P31-201ENST00000590085 CHIC2Q9UKJ5 165 aa14.28□□□□□ -0.12
HMGN1P31-201ENST00000590085 PREX1Q8TCU6 1659 aa14.27□□□□□ -0.12
HMGN1P31-201ENST00000590085 ABCC3O15438 1527 aa14.27□□□□□ -0.12
HMGN1P31-201ENST00000590085 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
HMGN1P31-201ENST00000590085 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
HMGN1P31-201ENST00000590085 ANKRD50Q9ULJ7 1429 aa14.25□□□□□ -0.13
HMGN1P31-201ENST00000590085 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
HMGN1P31-201ENST00000590085 CFAP65Q6ZU64 1925 aaKnown RBP14.24□□□□□ -0.13
HMGN1P31-201ENST00000590085 KIF3BO15066 747 aa14.24□□□□□ -0.13
HMGN1P31-201ENST00000590085 TET3O43151 1660 aa14.23□□□□□ -0.13
HMGN1P31-201ENST00000590085 HFM1A2PYH4 1435 aa14.23□□□□□ -0.13
HMGN1P31-201ENST00000590085 LMTK2Q8IWU2 1503 aa14.22□□□□□ -0.13
HMGN1P31-201ENST00000590085 ITGAEP38570 1179 aa14.22□□□□□ -0.13
HMGN1P31-201ENST00000590085 ZNF142P52746 1687 aaPredicted RBP14.22□□□□□ -0.13
HMGN1P31-201ENST00000590085 NAIPQ13075 1403 aa14.22□□□□□ -0.13
HMGN1P31-201ENST00000590085 MYO3AQ8NEV4 1616 aa14.22□□□□□ -0.13
HMGN1P31-201ENST00000590085 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
HMGN1P31-201ENST00000590085 GGT6Q6P531 493 aa14.2□□□□□ -0.14
HMGN1P31-201ENST00000590085 PZPP20742 1482 aa14.19□□□□□ -0.14
HMGN1P31-201ENST00000590085 E9PCH4 1651 aa14.19□□□□□ -0.14
HMGN1P31-201ENST00000590085 NPATQ14207 1427 aa14.17□□□□□ -0.14
HMGN1P31-201ENST00000590085 ZMYM3Q14202 1370 aa14.17□□□□□ -0.14
HMGN1P31-201ENST00000590085 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
HMGN1P31-201ENST00000590085 LMTK3Q96Q04 1460 aa14.15□□□□□ -0.14
HMGN1P31-201ENST00000590085 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
HMGN1P31-201ENST00000590085 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
HMGN1P31-201ENST00000590085 KANK1Q14678 1352 aa14.14□□□□□ -0.15
HMGN1P31-201ENST00000590085 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
HMGN1P31-201ENST00000590085 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
HMGN1P31-201ENST00000590085 SPHKAPQ2M3C7 1700 aa14.13□□□□□ -0.15
HMGN1P31-201ENST00000590085 CEBPAP49715 358 aaPredicted RBP14.13□□□□□ -0.15
HMGN1P31-201ENST00000590085 CEP170BQ9Y4F5 1589 aaPredicted RBP14.13□□□□□ -0.15
HMGN1P31-201ENST00000590085 SYNMO15061 1565 aa14.12□□□□□ -0.15
HMGN1P31-201ENST00000590085 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
HMGN1P31-201ENST00000590085 KDM5AP29375 1690 aaKnown RBP14.1□□□□□ -0.15
HMGN1P31-201ENST00000590085 PIK3C2BO00750 1634 aa14.1□□□□□ -0.15
HMGN1P31-201ENST00000590085 MYO5BQ9ULV0 1848 aa14.1□□□□□ -0.15
HMGN1P31-201ENST00000590085 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
HMGN1P31-201ENST00000590085 UHRF1BP1Q6BDS2 1440 aa14.09□□□□□ -0.15
HMGN1P31-201ENST00000590085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
HMGN1P31-201ENST00000590085 POLR1AO95602 1720 aaPredicted RBP14.08□□□□□ -0.16
HMGN1P31-201ENST00000590085 STRCQ7RTU9 1775 aa14.08□□□□□ -0.16
HMGN1P31-201ENST00000590085 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
HMGN1P31-201ENST00000590085 NUP155O75694 1391 aa14.07□□□□□ -0.16
HMGN1P31-201ENST00000590085 TNRQ92752 1358 aa14.07□□□□□ -0.16
HMGN1P31-201ENST00000590085 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
HMGN1P31-201ENST00000590085 NOS1P29475 1434 aa14.06□□□□□ -0.16
HMGN1P31-201ENST00000590085 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
HMGN1P31-201ENST00000590085 FBXO31Q5XUX0 539 aaPredicted RBP14.05□□□□□ -0.16
HMGN1P31-201ENST00000590085 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
HMGN1P31-201ENST00000590085 ADGRB3O60242 1522 aa14.02□□□□□ -0.16
HMGN1P31-201ENST00000590085 TRPM2O94759 1503 aa14.02□□□□□ -0.16
HMGN1P31-201ENST00000590085 KIF1BO60333 1816 aa14.01□□□□□ -0.17
HMGN1P31-201ENST00000590085 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
HMGN1P31-201ENST00000590085 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
HMGN1P31-201ENST00000590085 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
HMGN1P31-201ENST00000590085 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
HMGN1P31-201ENST00000590085 PTPRTO14522 1441 aa13.98□□□□□ -0.17
HMGN1P31-201ENST00000590085 NEURL4Q96JN8 1562 aa13.97□□□□□ -0.17
HMGN1P31-201ENST00000590085 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.17
HMGN1P31-201ENST00000590085 SLIT1O75093 1534 aa13.95□□□□□ -0.18
HMGN1P31-201ENST00000590085 HSPA2P54652 639 aa13.95□□□□□ -0.18
HMGN1P31-201ENST00000590085 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
HMGN1P31-201ENST00000590085 ARHGAP23Q9P227 1491 aa13.94□□□□□ -0.18
HMGN1P31-201ENST00000590085 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
HMGN1P31-201ENST00000590085 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
HMGN1P31-201ENST00000590085 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
HMGN1P31-201ENST00000590085 HRCP23327 699 aa13.93□□□□□ -0.18
HMGN1P31-201ENST00000590085 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
HMGN1P31-201ENST00000590085 PPLO60437 1756 aa13.91□□□□□ -0.18
HMGN1P31-201ENST00000590085 PKD2Q13563 968 aa13.91□□□□□ -0.18
HMGN1P31-201ENST00000590085 IDI1Q13907 227 aa13.9□□□□□ -0.18
HMGN1P31-201ENST00000590085 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
HMGN1P31-201ENST00000590085 SLC52A1Q9NWF4 448 aa13.9□□□□□ -0.18
HMGN1P31-201ENST00000590085 MED14O60244 1454 aa13.89□□□□□ -0.19
HMGN1P31-201ENST00000590085 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
HMGN1P31-201ENST00000590085 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
HMGN1P31-201ENST00000590085 NEXMIFQ5QGS0 1516 aa13.87□□□□□ -0.19
HMGN1P31-201ENST00000590085 THEMISQ8N1K5 641 aaPredicted RBP13.87□□□□□ -0.19
HMGN1P31-201ENST00000590085 TMEM2Q9UHN6 1383 aa13.86□□□□□ -0.19
HMGN1P31-201ENST00000590085 CCDC144AA2RUR9 1427 aa13.84□□□□□ -0.19
HMGN1P31-201ENST00000590085 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms