RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
NFIX-212ENST00000590027 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
NFIX-212ENST00000590027 ABCC5O15440 1437 aa23.5■■□□□ 1.35
NFIX-212ENST00000590027 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
NFIX-212ENST00000590027 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
NFIX-212ENST00000590027 DAPK1P53355 1430 aa23.49■■□□□ 1.35
NFIX-212ENST00000590027 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
NFIX-212ENST00000590027 MROH1Q8NDA8 1641 aa23.47■■□□□ 1.35
NFIX-212ENST00000590027 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.34
NFIX-212ENST00000590027 CEP170BQ9Y4F5 1589 aaPredicted RBP23.45■■□□□ 1.34
NFIX-212ENST00000590027 PZPP20742 1482 aa23.43■■□□□ 1.34
NFIX-212ENST00000590027 KIF15Q9NS87 1388 aa23.43■■□□□ 1.34
NFIX-212ENST00000590027 ILDR1Q86SU0 546 aaPredicted RBP23.42■■□□□ 1.34
NFIX-212ENST00000590027 ABCC3O15438 1527 aa23.42■■□□□ 1.34
NFIX-212ENST00000590027 CEP152O94986 1710 aa23.42■■□□□ 1.34
NFIX-212ENST00000590027 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
NFIX-212ENST00000590027 NCOA1Q15788 1441 aa23.41■■□□□ 1.34
NFIX-212ENST00000590027 ERBINQ96RT1 1412 aa23.39■■□□□ 1.33
NFIX-212ENST00000590027 WASHC2CQ9Y4E1 1318 aa23.38■■□□□ 1.33
NFIX-212ENST00000590027 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
NFIX-212ENST00000590027 DEPDC5O75140 1603 aa23.36■■□□□ 1.33
NFIX-212ENST00000590027 TNRQ92752 1358 aa23.35■■□□□ 1.33
NFIX-212ENST00000590027 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
NFIX-212ENST00000590027 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
NFIX-212ENST00000590027 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
NFIX-212ENST00000590027 PLA2R1Q13018 1463 aa23.33■■□□□ 1.33
NFIX-212ENST00000590027 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
NFIX-212ENST00000590027 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
NFIX-212ENST00000590027 PTPRTO14522 1441 aa23.33■■□□□ 1.32
NFIX-212ENST00000590027 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
NFIX-212ENST00000590027 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
NFIX-212ENST00000590027 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
NFIX-212ENST00000590027 DMRT2Q9Y5R5 561 aa23.3■■□□□ 1.32
NFIX-212ENST00000590027 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
NFIX-212ENST00000590027 NLRP1Q9C000 1473 aa23.26■■□□□ 1.31
NFIX-212ENST00000590027 POLR1AO95602 1720 aaPredicted RBP23.26■■□□□ 1.31
NFIX-212ENST00000590027 FBXO41Q8TF61 875 aa23.25■■□□□ 1.31
NFIX-212ENST00000590027 CFAP65Q6ZU64 1925 aaKnown RBP23.24■■□□□ 1.31
NFIX-212ENST00000590027 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
NFIX-212ENST00000590027 NCKAP5LQ9HCH0 1330 aa23.24■■□□□ 1.31
NFIX-212ENST00000590027 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
NFIX-212ENST00000590027 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
NFIX-212ENST00000590027 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
NFIX-212ENST00000590027 NEURL4Q96JN8 1562 aa23.21■■□□□ 1.31
NFIX-212ENST00000590027 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
NFIX-212ENST00000590027 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
NFIX-212ENST00000590027 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
NFIX-212ENST00000590027 KANK1Q14678 1352 aa23.2■■□□□ 1.3
NFIX-212ENST00000590027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.2■■□□□ 1.31e-8■■■■■ 27.4
NFIX-212ENST00000590027 PKD2Q13563 968 aa23.19■■□□□ 1.3
NFIX-212ENST00000590027 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
NFIX-212ENST00000590027 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
NFIX-212ENST00000590027 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
NFIX-212ENST00000590027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.3
NFIX-212ENST00000590027 UNC13BO14795 1591 aa23.14■■□□□ 1.3
NFIX-212ENST00000590027 ROCK1Q13464 1354 aa23.12■■□□□ 1.29
NFIX-212ENST00000590027 PIK3C2BO00750 1634 aa23.1■■□□□ 1.29
NFIX-212ENST00000590027 SYNMO15061 1565 aa23.1■■□□□ 1.29
NFIX-212ENST00000590027 TET3O43151 1660 aa23.09■■□□□ 1.29
NFIX-212ENST00000590027 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
NFIX-212ENST00000590027 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
NFIX-212ENST00000590027 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
NFIX-212ENST00000590027 IQGAP1P46940 1657 aa23.08■■□□□ 1.29
NFIX-212ENST00000590027 GCC2Q8IWJ2 1684 aa23.07■■□□□ 1.28
NFIX-212ENST00000590027 ITGAEP38570 1179 aa23.07■■□□□ 1.28
NFIX-212ENST00000590027 MED14O60244 1454 aa23.05■■□□□ 1.28
NFIX-212ENST00000590027 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
NFIX-212ENST00000590027 ANKLE2Q86XL3 938 aa23.05■■□□□ 1.28
NFIX-212ENST00000590027 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
NFIX-212ENST00000590027 NOS1P29475 1434 aa23.04■■□□□ 1.28
NFIX-212ENST00000590027 IQGAP3Q86VI3 1631 aa23.04■■□□□ 1.28
NFIX-212ENST00000590027 RPRD2Q5VT52 1461 aaKnown RBP23.03■■□□□ 1.28
NFIX-212ENST00000590027 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
NFIX-212ENST00000590027 SLIT1O75093 1534 aa23.03■■□□□ 1.28
NFIX-212ENST00000590027 ARHGAP23Q9P227 1491 aa23.02■■□□□ 1.28
NFIX-212ENST00000590027 SCAF11Q99590 1463 aaKnown RBP23■■□□□ 1.27
NFIX-212ENST00000590027 ADGRB3O60242 1522 aa23■■□□□ 1.27
NFIX-212ENST00000590027 E9PCH4 1651 aa23■■□□□ 1.27
NFIX-212ENST00000590027 CPS1P31327 1500 aa22.96■■□□□ 1.27
NFIX-212ENST00000590027 IDI1Q13907 227 aa22.94■■□□□ 1.26
NFIX-212ENST00000590027 MYO5BQ9ULV0 1848 aa22.93■■□□□ 1.26
NFIX-212ENST00000590027 STRCP1A6NGW2 1772 aa22.93■■□□□ 1.26
NFIX-212ENST00000590027 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
NFIX-212ENST00000590027 STAG3Q9UJ98 1225 aa22.92■■□□□ 1.26
NFIX-212ENST00000590027 NUP155O75694 1391 aa22.91■■□□□ 1.26
NFIX-212ENST00000590027 LTKP29376 864 aa22.91■■□□□ 1.26
NFIX-212ENST00000590027 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
NFIX-212ENST00000590027 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
NFIX-212ENST00000590027 NAIPQ13075 1403 aa22.88■■□□□ 1.25
NFIX-212ENST00000590027 TMEM131LA2VDJ0 1609 aa22.87■■□□□ 1.25
NFIX-212ENST00000590027 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
NFIX-212ENST00000590027 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
NFIX-212ENST00000590027 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
NFIX-212ENST00000590027 ZFYVE9O95405 1425 aa22.82■■□□□ 1.24
NFIX-212ENST00000590027 UBAP1LF5GYI3 381 aa22.81■■□□□ 1.24
NFIX-212ENST00000590027 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
NFIX-212ENST00000590027 RIMS2Q9UQ26 1411 aa22.78■■□□□ 1.24
NFIX-212ENST00000590027 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
NFIX-212ENST00000590027 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
NFIX-212ENST00000590027 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms