RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
TPM4-211ENST00000589897 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
TPM4-211ENST00000589897 A2MP01023 1474 aa13.02□□□□□ -0.33
TPM4-211ENST00000589897 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
TPM4-211ENST00000589897 TSPY4P0CV99 314 aa13.01□□□□□ -0.33
TPM4-211ENST00000589897 TSPY10P0CW01 314 aa13.01□□□□□ -0.33
TPM4-211ENST00000589897 CAMSAP2Q08AD1 1489 aa13.01□□□□□ -0.33
TPM4-211ENST00000589897 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
TPM4-211ENST00000589897 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
TPM4-211ENST00000589897 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
TPM4-211ENST00000589897 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
TPM4-211ENST00000589897 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
TPM4-211ENST00000589897 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
TPM4-211ENST00000589897 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
TPM4-211ENST00000589897 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
TPM4-211ENST00000589897 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
TPM4-211ENST00000589897 PLXNC1O60486 1568 aa12.95□□□□□ -0.34
TPM4-211ENST00000589897 KIF3BO15066 747 aa12.95□□□□□ -0.34
TPM4-211ENST00000589897 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
TPM4-211ENST00000589897 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
TPM4-211ENST00000589897 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
TPM4-211ENST00000589897 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
TPM4-211ENST00000589897 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
TPM4-211ENST00000589897 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
TPM4-211ENST00000589897 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
TPM4-211ENST00000589897 TNRQ92752 1358 aa12.93□□□□□ -0.34
TPM4-211ENST00000589897 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
TPM4-211ENST00000589897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.92□□□□□ -0.34
TPM4-211ENST00000589897 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
TPM4-211ENST00000589897 NPHP4O75161 1426 aaPredicted RBP12.9□□□□□ -0.34
TPM4-211ENST00000589897 ZNF142P52746 1687 aaPredicted RBP12.89□□□□□ -0.35
TPM4-211ENST00000589897 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
TPM4-211ENST00000589897 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
TPM4-211ENST00000589897 MED14O60244 1454 aa12.87□□□□□ -0.35
TPM4-211ENST00000589897 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
TPM4-211ENST00000589897 PTPN23Q9H3S7 1636 aa12.86□□□□□ -0.35
TPM4-211ENST00000589897 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
TPM4-211ENST00000589897 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
TPM4-211ENST00000589897 KDM5DQ9BY66 1539 aa12.85□□□□□ -0.35
TPM4-211ENST00000589897 FAM135BQ49AJ0 1406 aa12.85□□□□□ -0.35
TPM4-211ENST00000589897 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
TPM4-211ENST00000589897 FGD6Q6ZV73 1430 aa12.83□□□□□ -0.36
TPM4-211ENST00000589897 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
TPM4-211ENST00000589897 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
TPM4-211ENST00000589897 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
TPM4-211ENST00000589897 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
TPM4-211ENST00000589897 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
TPM4-211ENST00000589897 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
TPM4-211ENST00000589897 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
TPM4-211ENST00000589897 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
TPM4-211ENST00000589897 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
TPM4-211ENST00000589897 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
TPM4-211ENST00000589897 ABCC5O15440 1437 aa12.8□□□□□ -0.36
TPM4-211ENST00000589897 DAPK1P53355 1430 aa12.8□□□□□ -0.36
TPM4-211ENST00000589897 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
TPM4-211ENST00000589897 PZPP20742 1482 aa12.8□□□□□ -0.36
TPM4-211ENST00000589897 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
TPM4-211ENST00000589897 UGGT1Q9NYU2 1555 aa12.79□□□□□ -0.36
TPM4-211ENST00000589897 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
TPM4-211ENST00000589897 TXNDC2Q86VQ3 553 aa12.79□□□□□ -0.36
TPM4-211ENST00000589897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
TPM4-211ENST00000589897 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
TPM4-211ENST00000589897 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
TPM4-211ENST00000589897 ZC3H13Q5T200 1668 aaKnown RBP12.78□□□□□ -0.36
TPM4-211ENST00000589897 DEPDC5O75140 1603 aa12.77□□□□□ -0.36
TPM4-211ENST00000589897 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.37
TPM4-211ENST00000589897 KANK1Q14678 1352 aa12.77□□□□□ -0.37
TPM4-211ENST00000589897 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
TPM4-211ENST00000589897 ABCC3O15438 1527 aa12.76□□□□□ -0.37
TPM4-211ENST00000589897 CEP152O94986 1710 aa12.75□□□□□ -0.37
TPM4-211ENST00000589897 FOXD1Q16676 465 aa12.74□□□□□ -0.37
TPM4-211ENST00000589897 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
TPM4-211ENST00000589897 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
TPM4-211ENST00000589897 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
TPM4-211ENST00000589897 JCADQ9P266 1359 aa12.73□□□□□ -0.37
TPM4-211ENST00000589897 KCNA6P17658 529 aa12.73□□□□□ -0.37
TPM4-211ENST00000589897 RXRBP28702 533 aa12.73□□□□□ -0.37
TPM4-211ENST00000589897 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
TPM4-211ENST00000589897 TRIM52Q96A61 297 aa12.73□□□□□ -0.37
TPM4-211ENST00000589897 SLAIN2Q9P270 581 aa12.73□□□□□ -0.37
TPM4-211ENST00000589897 LTKP29376 864 aa12.72□□□□□ -0.37
TPM4-211ENST00000589897 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
TPM4-211ENST00000589897 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 SYNMO15061 1565 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
TPM4-211ENST00000589897 ERVK-7P63135 1459 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 SCAF11Q99590 1463 aaKnown RBP12.7□□□□□ -0.38
TPM4-211ENST00000589897 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
TPM4-211ENST00000589897 ITGAEP38570 1179 aa12.69□□□□□ -0.38
TPM4-211ENST00000589897 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
TPM4-211ENST00000589897 ARHGAP31Q2M1Z3 1444 aa12.67□□□□□ -0.38
TPM4-211ENST00000589897 ANKRD50Q9ULJ7 1429 aa12.67□□□□□ -0.38
TPM4-211ENST00000589897 MSH6P52701 1360 aa12.66□□□□□ -0.38
TPM4-211ENST00000589897 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
TPM4-211ENST00000589897 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
TPM4-211ENST00000589897 STRCP1A6NGW2 1772 aa12.63□□□□□ -0.39
TPM4-211ENST00000589897 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
TPM4-211ENST00000589897 BCANQ96GW7 911 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms