RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
PTBP1-215ENST00000589883 ARHGEF5Q12774 1597 aa30.18■■■□□ 2.42
PTBP1-215ENST00000589883 NCKAP5LQ9HCH0 1330 aa30.18■■■□□ 2.42
PTBP1-215ENST00000589883 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
PTBP1-215ENST00000589883 LTBP4Q8N2S1 1624 aa30.16■■■□□ 2.42
PTBP1-215ENST00000589883 WASHC2CQ9Y4E1 1318 aa30.14■■■□□ 2.42
PTBP1-215ENST00000589883 KDM5DQ9BY66 1539 aa30.13■■■□□ 2.41
PTBP1-215ENST00000589883 A2ML1A8K2U0 1454 aa30.12■■■□□ 2.41
PTBP1-215ENST00000589883 TCOF1Q13428 1488 aaKnown RBP30.11■■■□□ 2.41
PTBP1-215ENST00000589883 TNRQ92752 1358 aa30.09■■■□□ 2.41
PTBP1-215ENST00000589883 PZPP20742 1482 aa30.08■■■□□ 2.41
PTBP1-215ENST00000589883 MIA2Q96PC5 1412 aa30.05■■■□□ 2.4
PTBP1-215ENST00000589883 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
PTBP1-215ENST00000589883 ZNF335Q9H4Z2 1342 aaPredicted RBP30.03■■■□□ 2.4
PTBP1-215ENST00000589883 FBXO31Q5XUX0 539 aaPredicted RBP30.03■■■□□ 2.4
PTBP1-215ENST00000589883 MAST1Q9Y2H9 1570 aa30.03■■■□□ 2.4
PTBP1-215ENST00000589883 PPARGC1BQ86YN6 1023 aaKnown RBP30.02■■■□□ 2.4
PTBP1-215ENST00000589883 MYOM3Q5VTT5 1437 aa30.02■■■□□ 2.4
PTBP1-215ENST00000589883 THEMISQ8N1K5 641 aaPredicted RBP29.98■■■□□ 2.39
PTBP1-215ENST00000589883 NLRP1Q9C000 1473 aa29.98■■■□□ 2.39
PTBP1-215ENST00000589883 RNF17Q9BXT8 1623 aaKnown RBP29.95■■■□□ 2.38
PTBP1-215ENST00000589883 EIF2AK4Q9P2K8 1649 aaKnown RBP29.94■■■□□ 2.38
PTBP1-215ENST00000589883 ANKLE2Q86XL3 938 aa29.94■■■□□ 2.38
PTBP1-215ENST00000589883 ZC3H13Q5T200 1668 aaKnown RBP29.93■■■□□ 2.38
PTBP1-215ENST00000589883 POLR1AO95602 1720 aaPredicted RBP29.93■■■□□ 2.38
PTBP1-215ENST00000589883 UBAP1LF5GYI3 381 aa29.92■■■□□ 2.38
PTBP1-215ENST00000589883 DISP3Q9P2K9 1392 aa29.91■■■□□ 2.38
PTBP1-215ENST00000589883 ABCC3O15438 1527 aa29.89■■■□□ 2.38
PTBP1-215ENST00000589883 UGGT1Q9NYU2 1555 aa29.89■■■□□ 2.38
PTBP1-215ENST00000589883 DUOX2Q9NRD8 1548 aa29.88■■■□□ 2.37
PTBP1-215ENST00000589883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.88■■■□□ 2.372e-9■■■□□ 18.7
PTBP1-215ENST00000589883 NEURL4Q96JN8 1562 aa29.84■■■□□ 2.37
PTBP1-215ENST00000589883 CPS1P31327 1500 aa29.83■■■□□ 2.37
PTBP1-215ENST00000589883 SHANK2Q9UPX8 1470 aa29.83■■■□□ 2.37
PTBP1-215ENST00000589883 SPATA31D1Q6ZQQ2 1576 aa29.82■■■□□ 2.36
PTBP1-215ENST00000589883 KIF15Q9NS87 1388 aa29.81■■■□□ 2.36
PTBP1-215ENST00000589883 DEPDC5O75140 1603 aa29.8■■■□□ 2.36
PTBP1-215ENST00000589883 ERVK-7P63135 1459 aa29.8■■■□□ 2.36
PTBP1-215ENST00000589883 PTPN23Q9H3S7 1636 aa29.79■■■□□ 2.36
PTBP1-215ENST00000589883 MED14O60244 1454 aa29.79■■■□□ 2.36
PTBP1-215ENST00000589883 NPHP4O75161 1426 aaPredicted RBP29.79■■■□□ 2.36
PTBP1-215ENST00000589883 ERBINQ96RT1 1412 aa29.79■■■□□ 2.36
PTBP1-215ENST00000589883 ABCC5O15440 1437 aa29.78■■■□□ 2.36
PTBP1-215ENST00000589883 MROH1Q8NDA8 1641 aa29.78■■■□□ 2.36
PTBP1-215ENST00000589883 TOM1O60784 492 aa29.76■■■□□ 2.35
PTBP1-215ENST00000589883 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
PTBP1-215ENST00000589883 CROCC2H7BZ55 1655 aa29.76■■■□□ 2.35
PTBP1-215ENST00000589883 CEP152O94986 1710 aa29.75■■■□□ 2.35
PTBP1-215ENST00000589883 DAPK1P53355 1430 aa29.73■■■□□ 2.35
PTBP1-215ENST00000589883 FGD6Q6ZV73 1430 aa29.73■■■□□ 2.35
PTBP1-215ENST00000589883 KANK1Q14678 1352 aa29.72■■■□□ 2.35
PTBP1-215ENST00000589883 CFAP65Q6ZU64 1925 aaKnown RBP29.72■■■□□ 2.35
PTBP1-215ENST00000589883 ARHGAP31Q2M1Z3 1444 aa29.71■■■□□ 2.35
PTBP1-215ENST00000589883 PRDM15P57071 1507 aaPredicted RBP29.71■■■□□ 2.35
PTBP1-215ENST00000589883 IQGAP1P46940 1657 aa29.7■■■□□ 2.35
PTBP1-215ENST00000589883 VWDEQ8N2E2 1590 aa29.69■■■□□ 2.34
PTBP1-215ENST00000589883 ANKRD30AQ9BXX3 1397 aa29.69■■■□□ 2.34
PTBP1-215ENST00000589883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.68■■■□□ 2.34
PTBP1-215ENST00000589883 SCAF1Q9H7N4 1312 aaKnown RBP29.68■■■□□ 2.34
PTBP1-215ENST00000589883 ILDR2Q71H61 639 aa29.65■■■□□ 2.34
PTBP1-215ENST00000589883 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
PTBP1-215ENST00000589883 UBR1Q8IWV7 1749 aa29.64■■■□□ 2.34
PTBP1-215ENST00000589883 FAM50AQ14320 339 aaKnown RBP29.62■■■□□ 2.33
PTBP1-215ENST00000589883 CHIC2Q9UKJ5 165 aa29.61■■■□□ 2.33
PTBP1-215ENST00000589883 EID1Q9Y6B2 187 aa29.61■■■□□ 2.33
PTBP1-215ENST00000589883 SCAF11Q99590 1463 aaKnown RBP29.61■■■□□ 2.33
PTBP1-215ENST00000589883 SOCS7O14512 581 aa29.6■■■□□ 2.33
PTBP1-215ENST00000589883 TXNDC2Q86VQ3 553 aa29.59■■■□□ 2.33
PTBP1-215ENST00000589883 STAG3Q9UJ98 1225 aa29.59■■■□□ 2.33
PTBP1-215ENST00000589883 SLIT1O75093 1534 aa29.57■■■□□ 2.32
PTBP1-215ENST00000589883 ARHGAP23Q9P227 1491 aa29.56■■■□□ 2.32
PTBP1-215ENST00000589883 LMTK2Q8IWU2 1503 aa29.55■■■□□ 2.32
PTBP1-215ENST00000589883 HSPA1LP34931 641 aa29.55■■■□□ 2.32
PTBP1-215ENST00000589883 SYNMO15061 1565 aa29.54■■■□□ 2.32
PTBP1-215ENST00000589883 LTKP29376 864 aa29.52■■■□□ 2.32
PTBP1-215ENST00000589883 LRRC7Q96NW7 1537 aa29.51■■■□□ 2.32
PTBP1-215ENST00000589883 ADGRL2O95490 1459 aa29.51■■■□□ 2.31
PTBP1-215ENST00000589883 TMEM2Q9UHN6 1383 aa29.5■■■□□ 2.31
PTBP1-215ENST00000589883 PIK3C2BO00750 1634 aa29.49■■■□□ 2.31
PTBP1-215ENST00000589883 RRBP1Q9P2E9 1410 aaKnown RBP29.49■■■□□ 2.31
PTBP1-215ENST00000589883 KDM5AP29375 1690 aaKnown RBP29.49■■■□□ 2.31
PTBP1-215ENST00000589883 STRCP1A6NGW2 1772 aa29.47■■■□□ 2.31
PTBP1-215ENST00000589883 EFCAB6Q5THR3 1501 aa29.46■■■□□ 2.31
PTBP1-215ENST00000589883 IDI1Q13907 227 aa29.46■■■□□ 2.31
PTBP1-215ENST00000589883 SLC52A1Q9NWF4 448 aa29.45■■■□□ 2.31
PTBP1-215ENST00000589883 ANKRD50Q9ULJ7 1429 aa29.44■■■□□ 2.3
PTBP1-215ENST00000589883 ITGAEP38570 1179 aa29.42■■■□□ 2.3
PTBP1-215ENST00000589883 NOS1P29475 1434 aa29.42■■■□□ 2.3
PTBP1-215ENST00000589883 RPRD2Q5VT52 1461 aaKnown RBP29.4■■■□□ 2.3
PTBP1-215ENST00000589883 ALKQ9UM73 1620 aa29.39■■■□□ 2.3
PTBP1-215ENST00000589883 MED1Q15648 1581 aaPredicted RBP29.36■■■□□ 2.29
PTBP1-215ENST00000589883 ADGRB3O60242 1522 aa29.35■■■□□ 2.29
PTBP1-215ENST00000589883 HDGFP51858 240 aaKnown RBP29.33■■■□□ 2.29
PTBP1-215ENST00000589883 KCNA6P17658 529 aa29.32■■■□□ 2.28
PTBP1-215ENST00000589883 BCANQ96GW7 911 aa29.3■■■□□ 2.28
PTBP1-215ENST00000589883 TET3O43151 1660 aa29.3■■■□□ 2.28
PTBP1-215ENST00000589883 PHF23Q9BUL5 403 aaPredicted RBP29.29■■■□□ 2.28
PTBP1-215ENST00000589883 SLC26A8Q96RN1 970 aa29.28■■■□□ 2.28
PTBP1-215ENST00000589883 ROCK1Q13464 1354 aa29.27■■■□□ 2.28
PTBP1-215ENST00000589883 XIRP1Q702N8 1843 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms