RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 MAST1Q9Y2H9 1570 aa19.2■□□□□ 0.66
VAT1-206ENST00000589709 PKD2Q13563 968 aa19.19■□□□□ 0.66
VAT1-206ENST00000589709 PLA2R1Q13018 1463 aa19.19■□□□□ 0.66
VAT1-206ENST00000589709 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
VAT1-206ENST00000589709 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
VAT1-206ENST00000589709 MYO3AQ8NEV4 1616 aa19.18■□□□□ 0.66
VAT1-206ENST00000589709 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
VAT1-206ENST00000589709 PZPP20742 1482 aa19.16■□□□□ 0.66
VAT1-206ENST00000589709 FBXO31Q5XUX0 539 aaPredicted RBP19.16■□□□□ 0.66
VAT1-206ENST00000589709 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
VAT1-206ENST00000589709 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
VAT1-206ENST00000589709 TNRQ92752 1358 aa19.15■□□□□ 0.66
VAT1-206ENST00000589709 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
VAT1-206ENST00000589709 LTBP4Q8N2S1 1624 aa19.13■□□□□ 0.65
VAT1-206ENST00000589709 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
VAT1-206ENST00000589709 ABCC5O15440 1437 aa19.1■□□□□ 0.65
VAT1-206ENST00000589709 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
VAT1-206ENST00000589709 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
VAT1-206ENST00000589709 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
VAT1-206ENST00000589709 DUOX2Q9NRD8 1548 aa19.09■□□□□ 0.65
VAT1-206ENST00000589709 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
VAT1-206ENST00000589709 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
VAT1-206ENST00000589709 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
VAT1-206ENST00000589709 ABCC3O15438 1527 aa19.07■□□□□ 0.64
VAT1-206ENST00000589709 THEMISQ8N1K5 641 aaPredicted RBP19.07■□□□□ 0.64
VAT1-206ENST00000589709 NLRP1Q9C000 1473 aa19.07■□□□□ 0.64
VAT1-206ENST00000589709 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
VAT1-206ENST00000589709 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
VAT1-206ENST00000589709 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
VAT1-206ENST00000589709 DAPK1P53355 1430 aa19.04■□□□□ 0.64
VAT1-206ENST00000589709 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
VAT1-206ENST00000589709 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
VAT1-206ENST00000589709 ERBINQ96RT1 1412 aa19.03■□□□□ 0.64
VAT1-206ENST00000589709 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
VAT1-206ENST00000589709 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.63
VAT1-206ENST00000589709 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
VAT1-206ENST00000589709 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
VAT1-206ENST00000589709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19■□□□□ 0.63
VAT1-206ENST00000589709 UGGT1Q9NYU2 1555 aa19■□□□□ 0.63
VAT1-206ENST00000589709 ARHGAP31Q2M1Z3 1444 aa19■□□□□ 0.63
VAT1-206ENST00000589709 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
VAT1-206ENST00000589709 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
VAT1-206ENST00000589709 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
VAT1-206ENST00000589709 MED14O60244 1454 aa18.97■□□□□ 0.63
VAT1-206ENST00000589709 CHIC2Q9UKJ5 165 aa18.96■□□□□ 0.63
VAT1-206ENST00000589709 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
VAT1-206ENST00000589709 KANK1Q14678 1352 aa18.94■□□□□ 0.62
VAT1-206ENST00000589709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.62
VAT1-206ENST00000589709 CEP152O94986 1710 aa18.94■□□□□ 0.62
VAT1-206ENST00000589709 DEPDC5O75140 1603 aa18.93■□□□□ 0.62
VAT1-206ENST00000589709 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
VAT1-206ENST00000589709 ADGRL2O95490 1459 aa18.92■□□□□ 0.62
VAT1-206ENST00000589709 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
VAT1-206ENST00000589709 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
VAT1-206ENST00000589709 CPS1P31327 1500 aa18.9■□□□□ 0.62
VAT1-206ENST00000589709 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
VAT1-206ENST00000589709 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
VAT1-206ENST00000589709 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
VAT1-206ENST00000589709 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
VAT1-206ENST00000589709 ARHGAP23Q9P227 1491 aa18.85■□□□□ 0.61
VAT1-206ENST00000589709 ANKRD50Q9ULJ7 1429 aa18.85■□□□□ 0.61
VAT1-206ENST00000589709 SLIT1O75093 1534 aa18.84■□□□□ 0.61
VAT1-206ENST00000589709 LTKP29376 864 aa18.84■□□□□ 0.61
VAT1-206ENST00000589709 TXNDC2Q86VQ3 553 aa18.84■□□□□ 0.61
VAT1-206ENST00000589709 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
VAT1-206ENST00000589709 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
VAT1-206ENST00000589709 IDI1Q13907 227 aa18.83■□□□□ 0.6
VAT1-206ENST00000589709 TOM1O60784 492 aa18.82■□□□□ 0.6
VAT1-206ENST00000589709 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
VAT1-206ENST00000589709 NOS1P29475 1434 aa18.82■□□□□ 0.6
VAT1-206ENST00000589709 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
VAT1-206ENST00000589709 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
VAT1-206ENST00000589709 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
VAT1-206ENST00000589709 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
VAT1-206ENST00000589709 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
VAT1-206ENST00000589709 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
VAT1-206ENST00000589709 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
VAT1-206ENST00000589709 RPRD2Q5VT52 1461 aaKnown RBP18.78■□□□□ 0.6
VAT1-206ENST00000589709 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
VAT1-206ENST00000589709 SYNMO15061 1565 aa18.76■□□□□ 0.59
VAT1-206ENST00000589709 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
VAT1-206ENST00000589709 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
VAT1-206ENST00000589709 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
VAT1-206ENST00000589709 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
VAT1-206ENST00000589709 TET3O43151 1660 aa18.71■□□□□ 0.59
VAT1-206ENST00000589709 HSPA1LP34931 641 aa18.71■□□□□ 0.59
VAT1-206ENST00000589709 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
VAT1-206ENST00000589709 UNC13BO14795 1591 aa18.7■□□□□ 0.58
VAT1-206ENST00000589709 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
VAT1-206ENST00000589709 ALKQ9UM73 1620 aa18.68■□□□□ 0.58
VAT1-206ENST00000589709 KCNA6P17658 529 aa18.67■□□□□ 0.58
VAT1-206ENST00000589709 ITGAEP38570 1179 aa18.67■□□□□ 0.58
VAT1-206ENST00000589709 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
VAT1-206ENST00000589709 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
VAT1-206ENST00000589709 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
VAT1-206ENST00000589709 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
VAT1-206ENST00000589709 NUP155O75694 1391 aa18.65■□□□□ 0.58
VAT1-206ENST00000589709 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
VAT1-206ENST00000589709 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
VAT1-206ENST00000589709 TMEM131LA2VDJ0 1609 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms