RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 UHRF1BP1Q6BDS2 1440 aa25.9■■□□□ 1.74
H3F3B-208ENST00000589599 CROCC2H7BZ55 1655 aa25.9■■□□□ 1.74
H3F3B-208ENST00000589599 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
H3F3B-208ENST00000589599 NPATQ14207 1427 aa25.89■■□□□ 1.74
H3F3B-208ENST00000589599 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
H3F3B-208ENST00000589599 FAM135AQ9P2D6 1515 aa25.87■■□□□ 1.73
H3F3B-208ENST00000589599 NCOA1Q15788 1441 aa25.87■■□□□ 1.73
H3F3B-208ENST00000589599 ERBINQ96RT1 1412 aa25.86■■□□□ 1.73
H3F3B-208ENST00000589599 KDM5DQ9BY66 1539 aa25.85■■□□□ 1.73
H3F3B-208ENST00000589599 PREX1Q8TCU6 1659 aa25.85■■□□□ 1.73
H3F3B-208ENST00000589599 EIF2AK4Q9P2K8 1649 aaKnown RBP25.85■■□□□ 1.73
H3F3B-208ENST00000589599 PTPRKQ15262 1439 aa25.83■■□□□ 1.73
H3F3B-208ENST00000589599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.727e-39■□□□□ 9.5
H3F3B-208ENST00000589599 ADGRL2O95490 1459 aa25.81■■□□□ 1.72
H3F3B-208ENST00000589599 RNF17Q9BXT8 1623 aaKnown RBP25.81■■□□□ 1.72
H3F3B-208ENST00000589599 ITGAEP38570 1179 aa25.8■■□□□ 1.72
H3F3B-208ENST00000589599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.8■■□□□ 1.72
H3F3B-208ENST00000589599 FBXO31Q5XUX0 539 aaPredicted RBP25.77■■□□□ 1.72
H3F3B-208ENST00000589599 KANK1Q14678 1352 aa25.77■■□□□ 1.72
H3F3B-208ENST00000589599 PZPP20742 1482 aa25.76■■□□□ 1.71
H3F3B-208ENST00000589599 ABCC3O15438 1527 aa25.74■■□□□ 1.71
H3F3B-208ENST00000589599 ROCK1Q13464 1354 aa25.74■■□□□ 1.71
H3F3B-208ENST00000589599 TNRQ92752 1358 aa25.73■■□□□ 1.71
H3F3B-208ENST00000589599 ANKRD50Q9ULJ7 1429 aa25.72■■□□□ 1.71
H3F3B-208ENST00000589599 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
H3F3B-208ENST00000589599 MROH1Q8NDA8 1641 aa25.71■■□□□ 1.71
H3F3B-208ENST00000589599 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
H3F3B-208ENST00000589599 ZC3H13Q5T200 1668 aaKnown RBP25.7■■□□□ 1.7
H3F3B-208ENST00000589599 PRDM15P57071 1507 aaPredicted RBP25.68■■□□□ 1.7
H3F3B-208ENST00000589599 DEPDC5O75140 1603 aa25.64■■□□□ 1.7
H3F3B-208ENST00000589599 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
H3F3B-208ENST00000589599 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
H3F3B-208ENST00000589599 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
H3F3B-208ENST00000589599 CEP170BQ9Y4F5 1589 aaPredicted RBP25.62■■□□□ 1.69
H3F3B-208ENST00000589599 CEP152O94986 1710 aa25.6■■□□□ 1.69
H3F3B-208ENST00000589599 CAMSAP1Q5T5Y3 1602 aa25.6■■□□□ 1.69
H3F3B-208ENST00000589599 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
H3F3B-208ENST00000589599 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
H3F3B-208ENST00000589599 THEMISQ8N1K5 641 aaPredicted RBP25.59■■□□□ 1.69
H3F3B-208ENST00000589599 PKD2Q13563 968 aa25.58■■□□□ 1.69
H3F3B-208ENST00000589599 ZNF142P52746 1687 aaPredicted RBP25.58■■□□□ 1.68
H3F3B-208ENST00000589599 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.68
H3F3B-208ENST00000589599 NCKAP5LQ9HCH0 1330 aa25.57■■□□□ 1.68
H3F3B-208ENST00000589599 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
H3F3B-208ENST00000589599 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
H3F3B-208ENST00000589599 STRCQ7RTU9 1775 aa25.55■■□□□ 1.68
H3F3B-208ENST00000589599 PTPRTO14522 1441 aa25.54■■□□□ 1.68
H3F3B-208ENST00000589599 PLA2R1Q13018 1463 aa25.54■■□□□ 1.68
H3F3B-208ENST00000589599 NUP155O75694 1391 aa25.5■■□□□ 1.67
H3F3B-208ENST00000589599 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
H3F3B-208ENST00000589599 UGGT1Q9NYU2 1555 aa25.49■■□□□ 1.67
H3F3B-208ENST00000589599 UNC13BO14795 1591 aa25.48■■□□□ 1.67
H3F3B-208ENST00000589599 EFCAB6Q5THR3 1501 aa25.47■■□□□ 1.67
H3F3B-208ENST00000589599 CFAP65Q6ZU64 1925 aaKnown RBP25.46■■□□□ 1.67
H3F3B-208ENST00000589599 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
H3F3B-208ENST00000589599 RPRD2Q5VT52 1461 aaKnown RBP25.45■■□□□ 1.66
H3F3B-208ENST00000589599 NAIPQ13075 1403 aa25.45■■□□□ 1.66
H3F3B-208ENST00000589599 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
H3F3B-208ENST00000589599 IDI1Q13907 227 aa25.43■■□□□ 1.66
H3F3B-208ENST00000589599 NOS1P29475 1434 aa25.42■■□□□ 1.66
H3F3B-208ENST00000589599 TET3O43151 1660 aa25.41■■□□□ 1.66
H3F3B-208ENST00000589599 HFM1A2PYH4 1435 aa25.4■■□□□ 1.66
H3F3B-208ENST00000589599 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
H3F3B-208ENST00000589599 IQGAP3Q86VI3 1631 aa25.37■■□□□ 1.65
H3F3B-208ENST00000589599 TRIM52Q96A61 297 aa25.37■■□□□ 1.65
H3F3B-208ENST00000589599 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
H3F3B-208ENST00000589599 EID1Q9Y6B2 187 aa25.36■■□□□ 1.65
H3F3B-208ENST00000589599 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
H3F3B-208ENST00000589599 GCC2Q8IWJ2 1684 aa25.35■■□□□ 1.65
H3F3B-208ENST00000589599 SYNMO15061 1565 aa25.34■■□□□ 1.65
H3F3B-208ENST00000589599 NPHP4O75161 1426 aaPredicted RBP25.33■■□□□ 1.65
H3F3B-208ENST00000589599 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
H3F3B-208ENST00000589599 UBR1Q8IWV7 1749 aa25.32■■□□□ 1.64
H3F3B-208ENST00000589599 PIK3C2BO00750 1634 aa25.31■■□□□ 1.64
H3F3B-208ENST00000589599 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
H3F3B-208ENST00000589599 MED14O60244 1454 aa25.3■■□□□ 1.64
H3F3B-208ENST00000589599 ZNF335Q9H4Z2 1342 aaPredicted RBP25.3■■□□□ 1.64
H3F3B-208ENST00000589599 POLR1AO95602 1720 aaPredicted RBP25.29■■□□□ 1.64
H3F3B-208ENST00000589599 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
H3F3B-208ENST00000589599 SLIT1O75093 1534 aa25.28■■□□□ 1.64
H3F3B-208ENST00000589599 LTKP29376 864 aa25.28■■□□□ 1.64
H3F3B-208ENST00000589599 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
H3F3B-208ENST00000589599 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
H3F3B-208ENST00000589599 E9PCH4 1651 aa25.27■■□□□ 1.64
H3F3B-208ENST00000589599 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
H3F3B-208ENST00000589599 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
H3F3B-208ENST00000589599 SLC4A1APQ9BWU0 796 aaKnown RBP25.25■■□□□ 1.63
H3F3B-208ENST00000589599 KDM5AP29375 1690 aaKnown RBP25.25■■□□□ 1.63
H3F3B-208ENST00000589599 ADGRB3O60242 1522 aa25.24■■□□□ 1.63
H3F3B-208ENST00000589599 ACIN1Q9UKV3 1341 aaKnown RBP25.24■■□□□ 1.63
H3F3B-208ENST00000589599 LTBP4Q8N2S1 1624 aa25.23■■□□□ 1.63
H3F3B-208ENST00000589599 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
H3F3B-208ENST00000589599 SETD5Q9C0A6 1442 aa25.19■■□□□ 1.62
H3F3B-208ENST00000589599 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.18■■□□□ 1.62
H3F3B-208ENST00000589599 BCANQ96GW7 911 aa25.18■■□□□ 1.62
H3F3B-208ENST00000589599 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
H3F3B-208ENST00000589599 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
H3F3B-208ENST00000589599 RIMS2Q9UQ26 1411 aa25.14■■□□□ 1.62
H3F3B-208ENST00000589599 TMEM131LA2VDJ0 1609 aa25.14■■□□□ 1.61
H3F3B-208ENST00000589599 MPHOSPH9Q99550 1183 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms