RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 KIF3BO15066 747 aa24.45■■□□□ 1.5
ACTN4-211ENST00000589528 TNRQ92752 1358 aa24.43■■□□□ 1.5
ACTN4-211ENST00000589528 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
ACTN4-211ENST00000589528 KDM5DQ9BY66 1539 aa24.43■■□□□ 1.5
ACTN4-211ENST00000589528 CCDC141Q6ZP82 1450 aa24.43■■□□□ 1.5
ACTN4-211ENST00000589528 WASHC2CQ9Y4E1 1318 aa24.4■■□□□ 1.5
ACTN4-211ENST00000589528 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
ACTN4-211ENST00000589528 PZPP20742 1482 aa24.39■■□□□ 1.5
ACTN4-211ENST00000589528 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.5
ACTN4-211ENST00000589528 FBXO31Q5XUX0 539 aaPredicted RBP24.39■■□□□ 1.49
ACTN4-211ENST00000589528 RSPH4AQ5TD94 716 aa24.38■■□□□ 1.49
ACTN4-211ENST00000589528 CPS1P31327 1500 aa24.37■■□□□ 1.49
ACTN4-211ENST00000589528 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
ACTN4-211ENST00000589528 NCOA2Q15596 1464 aa24.36■■□□□ 1.49
ACTN4-211ENST00000589528 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
ACTN4-211ENST00000589528 TOM1O60784 492 aa24.35■■□□□ 1.49
ACTN4-211ENST00000589528 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
ACTN4-211ENST00000589528 TSPY4P0CV99 314 aa24.33■■□□□ 1.49
ACTN4-211ENST00000589528 TSPY10P0CW01 314 aa24.33■■□□□ 1.49
ACTN4-211ENST00000589528 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.49
ACTN4-211ENST00000589528 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
ACTN4-211ENST00000589528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.32■■□□□ 1.483e-6■■■□□ 14.7
ACTN4-211ENST00000589528 UGGT1Q9NYU2 1555 aa24.32■■□□□ 1.48
ACTN4-211ENST00000589528 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
ACTN4-211ENST00000589528 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
ACTN4-211ENST00000589528 ARHGEF5Q12774 1597 aa24.29■■□□□ 1.48
ACTN4-211ENST00000589528 HSPA1LP34931 641 aa24.28■■□□□ 1.48
ACTN4-211ENST00000589528 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
ACTN4-211ENST00000589528 NPHP4O75161 1426 aaPredicted RBP24.26■■□□□ 1.47
ACTN4-211ENST00000589528 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
ACTN4-211ENST00000589528 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
ACTN4-211ENST00000589528 VWDEQ8N2E2 1590 aa24.24■■□□□ 1.47
ACTN4-211ENST00000589528 ZC3H13Q5T200 1668 aaKnown RBP24.24■■□□□ 1.47
ACTN4-211ENST00000589528 CFAP65Q6ZU64 1925 aaKnown RBP24.23■■□□□ 1.47
ACTN4-211ENST00000589528 RNF17Q9BXT8 1623 aaKnown RBP24.22■■□□□ 1.47
ACTN4-211ENST00000589528 MED14O60244 1454 aa24.21■■□□□ 1.47
ACTN4-211ENST00000589528 ABCC3O15438 1527 aa24.19■■□□□ 1.46
ACTN4-211ENST00000589528 EIF2AK4Q9P2K8 1649 aaKnown RBP24.18■■□□□ 1.46
ACTN4-211ENST00000589528 MAST1Q9Y2H9 1570 aa24.17■■□□□ 1.46
ACTN4-211ENST00000589528 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
ACTN4-211ENST00000589528 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
ACTN4-211ENST00000589528 CEP152O94986 1710 aa24.15■■□□□ 1.46
ACTN4-211ENST00000589528 ERVK-7P63135 1459 aa24.14■■□□□ 1.46
ACTN4-211ENST00000589528 SYNMO15061 1565 aa24.13■■□□□ 1.45
ACTN4-211ENST00000589528 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
ACTN4-211ENST00000589528 STRCP1A6NGW2 1772 aa24.13■■□□□ 1.45
ACTN4-211ENST00000589528 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
ACTN4-211ENST00000589528 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
ACTN4-211ENST00000589528 ALKQ9UM73 1620 aa24.09■■□□□ 1.45
ACTN4-211ENST00000589528 LRRC7Q96NW7 1537 aa24.09■■□□□ 1.45
ACTN4-211ENST00000589528 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
ACTN4-211ENST00000589528 DUOX2Q9NRD8 1548 aa24.07■■□□□ 1.44
ACTN4-211ENST00000589528 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
ACTN4-211ENST00000589528 SCAF11Q99590 1463 aaKnown RBP24.06■■□□□ 1.44
ACTN4-211ENST00000589528 KANK4Q5T7N3 995 aaPredicted RBP24.02■■□□□ 1.44
ACTN4-211ENST00000589528 MAP3K1Q13233 1512 aa24.01■■□□□ 1.43
ACTN4-211ENST00000589528 TXNDC2Q86VQ3 553 aa24.01■■□□□ 1.43
ACTN4-211ENST00000589528 EID1Q9Y6B2 187 aa24.01■■□□□ 1.43
ACTN4-211ENST00000589528 CROCC2H7BZ55 1655 aa24■■□□□ 1.43
ACTN4-211ENST00000589528 KIF15Q9NS87 1388 aa24■■□□□ 1.43
ACTN4-211ENST00000589528 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
ACTN4-211ENST00000589528 PRDM15P57071 1507 aaPredicted RBP23.99■■□□□ 1.43
ACTN4-211ENST00000589528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.438e-8■□□□□ 10.6
ACTN4-211ENST00000589528 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
ACTN4-211ENST00000589528 SLIT1O75093 1534 aa23.98■■□□□ 1.43
ACTN4-211ENST00000589528 LTKP29376 864 aa23.97■■□□□ 1.43
ACTN4-211ENST00000589528 ARHGAP31Q2M1Z3 1444 aa23.97■■□□□ 1.43
ACTN4-211ENST00000589528 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
ACTN4-211ENST00000589528 ARHGAP23Q9P227 1491 aa23.96■■□□□ 1.43
ACTN4-211ENST00000589528 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
ACTN4-211ENST00000589528 KANK1Q14678 1352 aa23.95■■□□□ 1.42
ACTN4-211ENST00000589528 PIK3C2BO00750 1634 aa23.95■■□□□ 1.42
ACTN4-211ENST00000589528 XIRP1Q702N8 1843 aaKnown RBP23.94■■□□□ 1.42
ACTN4-211ENST00000589528 PTPN23Q9H3S7 1636 aa23.94■■□□□ 1.42
ACTN4-211ENST00000589528 APLP2Q06481 763 aa23.93■■□□□ 1.42
ACTN4-211ENST00000589528 ABCC5O15440 1437 aa23.9■■□□□ 1.42
ACTN4-211ENST00000589528 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
ACTN4-211ENST00000589528 EFCAB6Q5THR3 1501 aa23.88■■□□□ 1.41
ACTN4-211ENST00000589528 DAPK1P53355 1430 aa23.87■■□□□ 1.41
ACTN4-211ENST00000589528 KDM5AP29375 1690 aaKnown RBP23.87■■□□□ 1.41
ACTN4-211ENST00000589528 ANKRD30AQ9BXX3 1397 aa23.84■■□□□ 1.41
ACTN4-211ENST00000589528 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
ACTN4-211ENST00000589528 TMEM94Q12767 1356 aa23.82■■□□□ 1.4
ACTN4-211ENST00000589528 IDI1Q13907 227 aa23.82■■□□□ 1.4
ACTN4-211ENST00000589528 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
ACTN4-211ENST00000589528 BCANQ96GW7 911 aa23.81■■□□□ 1.4
ACTN4-211ENST00000589528 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
ACTN4-211ENST00000589528 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
ACTN4-211ENST00000589528 KCNA6P17658 529 aa23.8■■□□□ 1.4
ACTN4-211ENST00000589528 PROSER2Q86WR7 435 aaPredicted RBP23.8■■□□□ 1.4
ACTN4-211ENST00000589528 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
ACTN4-211ENST00000589528 ROBO1Q9Y6N7 1651 aa23.79■■□□□ 1.4
ACTN4-211ENST00000589528 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
ACTN4-211ENST00000589528 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
ACTN4-211ENST00000589528 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
ACTN4-211ENST00000589528 TET3O43151 1660 aa23.74■■□□□ 1.39
ACTN4-211ENST00000589528 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
ACTN4-211ENST00000589528 NKTRP30414 1462 aaKnown RBP23.73■■□□□ 1.39
ACTN4-211ENST00000589528 MSH6P52701 1360 aa23.72■■□□□ 1.39
ACTN4-211ENST00000589528 NOS1P29475 1434 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms