RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 DNMT1P26358 1616 aaKnown RBP25.32■■□□□ 1.64
LINC01140-209ENST00000589455 FBXO31Q5XUX0 539 aaPredicted RBP25.31■■□□□ 1.64
LINC01140-209ENST00000589455 ANKLE2Q86XL3 938 aa25.31■■□□□ 1.64
LINC01140-209ENST00000589455 CPS1P31327 1500 aa25.31■■□□□ 1.64
LINC01140-209ENST00000589455 FAM135AQ9P2D6 1515 aa25.31■■□□□ 1.64
LINC01140-209ENST00000589455 THEMISQ8N1K5 641 aaPredicted RBP25.3■■□□□ 1.64
LINC01140-209ENST00000589455 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
LINC01140-209ENST00000589455 WASHC2CQ9Y4E1 1318 aa25.29■■□□□ 1.64
LINC01140-209ENST00000589455 PZPP20742 1482 aa25.28■■□□□ 1.64
LINC01140-209ENST00000589455 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
LINC01140-209ENST00000589455 HSPA1LP34931 641 aa25.27■■□□□ 1.64
LINC01140-209ENST00000589455 SHANK2Q9UPX8 1470 aa25.27■■□□□ 1.64
LINC01140-209ENST00000589455 MIA2Q96PC5 1412 aa25.25■■□□□ 1.63
LINC01140-209ENST00000589455 KDM5DQ9BY66 1539 aa25.24■■□□□ 1.63
LINC01140-209ENST00000589455 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
LINC01140-209ENST00000589455 SCAF1Q9H7N4 1312 aaKnown RBP25.24■■□□□ 1.63
LINC01140-209ENST00000589455 PIP4K2BP78356 416 aa25.24■■□□□ 1.63
LINC01140-209ENST00000589455 NLRP1Q9C000 1473 aa25.23■■□□□ 1.63
LINC01140-209ENST00000589455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.21■■□□□ 1.63
LINC01140-209ENST00000589455 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
LINC01140-209ENST00000589455 TSPY4P0CV99 314 aa25.2■■□□□ 1.62
LINC01140-209ENST00000589455 TSPY10P0CW01 314 aa25.2■■□□□ 1.62
LINC01140-209ENST00000589455 MED14O60244 1454 aa25.19■■□□□ 1.62
LINC01140-209ENST00000589455 NPHP4O75161 1426 aaPredicted RBP25.16■■□□□ 1.62
LINC01140-209ENST00000589455 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
LINC01140-209ENST00000589455 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
LINC01140-209ENST00000589455 UGGT1Q9NYU2 1555 aa25.14■■□□□ 1.62
LINC01140-209ENST00000589455 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
LINC01140-209ENST00000589455 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.61
LINC01140-209ENST00000589455 MED1Q15648 1581 aaPredicted RBP25.12■■□□□ 1.61
LINC01140-209ENST00000589455 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
LINC01140-209ENST00000589455 ARHGEF5Q12774 1597 aa25.09■■□□□ 1.61
LINC01140-209ENST00000589455 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
LINC01140-209ENST00000589455 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
LINC01140-209ENST00000589455 ABCC3O15438 1527 aa25.02■■□□□ 1.6
LINC01140-209ENST00000589455 LRRC7Q96NW7 1537 aa25.01■■□□□ 1.59
LINC01140-209ENST00000589455 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
LINC01140-209ENST00000589455 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
LINC01140-209ENST00000589455 IQGAP1P46940 1657 aa24.98■■□□□ 1.59
LINC01140-209ENST00000589455 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
LINC01140-209ENST00000589455 ZC3H13Q5T200 1668 aaKnown RBP24.95■■□□□ 1.58
LINC01140-209ENST00000589455 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
LINC01140-209ENST00000589455 TXNDC2Q86VQ3 553 aa24.93■■□□□ 1.58
LINC01140-209ENST00000589455 SCAF11Q99590 1463 aaKnown RBP24.93■■□□□ 1.58
LINC01140-209ENST00000589455 EIF2AK4Q9P2K8 1649 aaKnown RBP24.93■■□□□ 1.58
LINC01140-209ENST00000589455 SYNMO15061 1565 aa24.93■■□□□ 1.58
LINC01140-209ENST00000589455 LTKP29376 864 aa24.91■■□□□ 1.58
LINC01140-209ENST00000589455 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
LINC01140-209ENST00000589455 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
LINC01140-209ENST00000589455 ARHGAP23Q9P227 1491 aa24.89■■□□□ 1.58
LINC01140-209ENST00000589455 MYOM3Q5VTT5 1437 aa24.89■■□□□ 1.58
LINC01140-209ENST00000589455 SLIT1O75093 1534 aa24.87■■□□□ 1.57
LINC01140-209ENST00000589455 DUOX2Q9NRD8 1548 aa24.87■■□□□ 1.57
LINC01140-209ENST00000589455 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
LINC01140-209ENST00000589455 MROH1Q8NDA8 1641 aa24.86■■□□□ 1.57
LINC01140-209ENST00000589455 STRCP1A6NGW2 1772 aa24.85■■□□□ 1.57
LINC01140-209ENST00000589455 MAP3K1Q13233 1512 aa24.85■■□□□ 1.57
LINC01140-209ENST00000589455 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
LINC01140-209ENST00000589455 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
LINC01140-209ENST00000589455 FAM135BQ49AJ0 1406 aa24.83■■□□□ 1.57
LINC01140-209ENST00000589455 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
LINC01140-209ENST00000589455 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
LINC01140-209ENST00000589455 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
LINC01140-209ENST00000589455 RGS17Q9UGC6 210 aaPredicted RBP24.81■■□□□ 1.56
LINC01140-209ENST00000589455 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
LINC01140-209ENST00000589455 PRDM15P57071 1507 aaPredicted RBP24.78■■□□□ 1.56
LINC01140-209ENST00000589455 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
LINC01140-209ENST00000589455 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
LINC01140-209ENST00000589455 KCNA6P17658 529 aa24.76■■□□□ 1.55
LINC01140-209ENST00000589455 KANK1Q14678 1352 aa24.76■■□□□ 1.55
LINC01140-209ENST00000589455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.55
LINC01140-209ENST00000589455 ABCC5O15440 1437 aa24.74■■□□□ 1.55
LINC01140-209ENST00000589455 TMEM94Q12767 1356 aa24.73■■□□□ 1.55
LINC01140-209ENST00000589455 IDI1Q13907 227 aa24.73■■□□□ 1.55
LINC01140-209ENST00000589455 CEP152O94986 1710 aa24.72■■□□□ 1.55
LINC01140-209ENST00000589455 PROSER2Q86WR7 435 aaPredicted RBP24.69■■□□□ 1.54
LINC01140-209ENST00000589455 EFCAB6Q5THR3 1501 aa24.68■■□□□ 1.54
LINC01140-209ENST00000589455 LMTK2Q8IWU2 1503 aa24.67■■□□□ 1.54
LINC01140-209ENST00000589455 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
LINC01140-209ENST00000589455 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
LINC01140-209ENST00000589455 SLC26A8Q96RN1 970 aa24.66■■□□□ 1.54
LINC01140-209ENST00000589455 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
LINC01140-209ENST00000589455 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
LINC01140-209ENST00000589455 DAPK1P53355 1430 aa24.65■■□□□ 1.54
LINC01140-209ENST00000589455 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
LINC01140-209ENST00000589455 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.54
LINC01140-209ENST00000589455 POTEAQ6S8J7 498 aa24.64■■□□□ 1.54
LINC01140-209ENST00000589455 TET3O43151 1660 aa24.64■■□□□ 1.53
LINC01140-209ENST00000589455 XIRP1Q702N8 1843 aaKnown RBP24.63■■□□□ 1.53
LINC01140-209ENST00000589455 NOS1P29475 1434 aa24.62■■□□□ 1.53
LINC01140-209ENST00000589455 APLP2Q06481 763 aa24.62■■□□□ 1.53
LINC01140-209ENST00000589455 NKTRP30414 1462 aaKnown RBP24.61■■□□□ 1.53
LINC01140-209ENST00000589455 MSH6P52701 1360 aa24.59■■□□□ 1.53
LINC01140-209ENST00000589455 SLAIN2Q9P270 581 aa24.59■■□□□ 1.53
LINC01140-209ENST00000589455 PTPN23Q9H3S7 1636 aa24.58■■□□□ 1.53
LINC01140-209ENST00000589455 HDGFP51858 240 aaKnown RBP24.58■■□□□ 1.53
LINC01140-209ENST00000589455 RBM33Q96EV2 1170 aaKnown RBP24.57■■□□□ 1.52
LINC01140-209ENST00000589455 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
LINC01140-209ENST00000589455 FGD6Q6ZV73 1430 aa24.57■■□□□ 1.52
LINC01140-209ENST00000589455 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms