RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 ANKRD62A6NC57 917 aa7.63□□□□□ -1.19
PTPN2-209ENST00000589444 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
PTPN2-209ENST00000589444 DCBLD2Q96PD2 775 aa7.63□□□□□ -1.19
PTPN2-209ENST00000589444 MARCH6O60337 910 aa7.62□□□□□ -1.19
PTPN2-209ENST00000589444 SREK1Q8WXA9 508 aaKnown RBP7.62□□□□□ -1.19
PTPN2-209ENST00000589444 SGIP1Q9BQI5 828 aa7.62□□□□□ -1.19
PTPN2-209ENST00000589444 PLCD4Q9BRC7 762 aa7.62□□□□□ -1.19
PTPN2-209ENST00000589444 MAFGO15525 162 aa7.62□□□□□ -1.19
PTPN2-209ENST00000589444 FARP1Q9Y4F1 1045 aaPredicted RBP7.62□□□□□ -1.19
PTPN2-209ENST00000589444 ZEB1P37275 1124 aaPredicted RBP7.61□□□□□ -1.19
PTPN2-209ENST00000589444 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
PTPN2-209ENST00000589444 TSR1Q2NL82 804 aaKnown RBP7.61□□□□□ -1.19
PTPN2-209ENST00000589444 HIRIP3Q9BW71 556 aaPredicted RBP7.61□□□□□ -1.19
PTPN2-209ENST00000589444 MYH16Q9H6N6 1097 aa7.6□□□□□ -1.19
PTPN2-209ENST00000589444 IVNS1ABPQ9Y6Y0 642 aa7.6□□□□□ -1.19
PTPN2-209ENST00000589444 HSP90AB4PQ58FF6 505 aa7.59□□□□□ -1.19
PTPN2-209ENST00000589444 ILDR1Q86SU0 546 aaPredicted RBP7.59□□□□□ -1.19
PTPN2-209ENST00000589444 RBM26Q5T8P6 1007 aaKnown RBP7.59□□□□□ -1.19
PTPN2-209ENST00000589444 ZNF579Q8NAF0 562 aaKnown RBP7.59□□□□□ -1.19
PTPN2-209ENST00000589444 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
PTPN2-209ENST00000589444 C8orf37Q96NL8 207 aa7.59□□□□□ -1.19
PTPN2-209ENST00000589444 MRRFQ96E11 262 aaKnown RBP7.58□□□□□ -1.2
PTPN2-209ENST00000589444 ANAPC15P60006 121 aa7.58□□□□□ -1.2
PTPN2-209ENST00000589444 SIRT1Q96EB6 747 aa7.58□□□□□ -1.2
PTPN2-209ENST00000589444 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
PTPN2-209ENST00000589444 CUX2O14529 1486 aa7.57□□□□□ -1.2
PTPN2-209ENST00000589444 RB1CC1Q8TDY2 1594 aa7.57□□□□□ -1.2
PTPN2-209ENST00000589444 PTMSP20962 102 aa7.57□□□□□ -1.2
PTPN2-209ENST00000589444 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
PTPN2-209ENST00000589444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
PTPN2-209ENST00000589444 PCDH10Q9P2E7 1040 aa7.56□□□□□ -1.2
PTPN2-209ENST00000589444 TPD52L2O43399 206 aaKnown RBP7.55□□□□□ -1.2
PTPN2-209ENST00000589444 CC2D2AQ9P2K1 1620 aa7.55□□□□□ -1.2
PTPN2-209ENST00000589444 UBXN4Q92575 508 aa7.55□□□□□ -1.2
PTPN2-209ENST00000589444 ZNF330Q9Y3S2 320 aaPredicted RBP7.55□□□□□ -1.2
PTPN2-209ENST00000589444 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
PTPN2-209ENST00000589444 TCF3P15923 654 aa7.54□□□□□ -1.2
PTPN2-209ENST00000589444 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
PTPN2-209ENST00000589444 SUGT1Q9Y2Z0 365 aa7.53□□□□□ -1.2
PTPN2-209ENST00000589444 CENPBP07199 599 aaPredicted RBP7.53□□□□□ -1.2
PTPN2-209ENST00000589444 TXNDC2Q86VQ3 553 aa7.52□□□□□ -1.21
PTPN2-209ENST00000589444 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
PTPN2-209ENST00000589444 COG6Q9Y2V7 657 aa7.52□□□□□ -1.21
PTPN2-209ENST00000589444 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
PTPN2-209ENST00000589444 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
PTPN2-209ENST00000589444 CSB-PGBD3P0DP91 1061 aa7.5□□□□□ -1.21
PTPN2-209ENST00000589444 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
PTPN2-209ENST00000589444 AMHR2Q16671 573 aa7.5□□□□□ -1.21
PTPN2-209ENST00000589444 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
PTPN2-209ENST00000589444 TBC1D12O60347 775 aa7.49□□□□□ -1.21
PTPN2-209ENST00000589444 GPATCH11Q8N954 259 aa7.49□□□□□ -1.21
PTPN2-209ENST00000589444 PBXIP1Q96AQ6 731 aa7.49□□□□□ -1.21
PTPN2-209ENST00000589444 SLC52A1Q9NWF4 448 aa7.49□□□□□ -1.21
PTPN2-209ENST00000589444 GIMAP6Q6P9H5 292 aa7.49□□□□□ -1.21
PTPN2-209ENST00000589444 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
PTPN2-209ENST00000589444 PPP1R1BQ9UD71 204 aaPredicted RBP7.49□□□□□ -1.21
PTPN2-209ENST00000589444 SPTY2D1Q68D10 685 aaPredicted RBP7.48□□□□□ -1.21
PTPN2-209ENST00000589444 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
PTPN2-209ENST00000589444 AAMPQ13685 434 aa7.48□□□□□ -1.21
PTPN2-209ENST00000589444 ZNF662Q6ZS27 426 aa7.48□□□□□ -1.21
PTPN2-209ENST00000589444 CCDC180Q9P1Z9 1646 aa7.47□□□□□ -1.21
PTPN2-209ENST00000589444 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
PTPN2-209ENST00000589444 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
PTPN2-209ENST00000589444 CALR3Q96L12 384 aaKnown RBP7.47□□□□□ -1.21
PTPN2-209ENST00000589444 MINK1Q8N4C8 1332 aaPredicted RBP7.46□□□□□ -1.21
PTPN2-209ENST00000589444 BICRAQ9NZM4 1560 aa7.46□□□□□ -1.21
PTPN2-209ENST00000589444 RAB11FIP3O75154 756 aa7.46□□□□□ -1.22
PTPN2-209ENST00000589444 ERCC3P19447 782 aa7.46□□□□□ -1.22
PTPN2-209ENST00000589444 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
PTPN2-209ENST00000589444 CNPY4Q8N129 248 aa7.46□□□□□ -1.22
PTPN2-209ENST00000589444 OTUD5Q96G74 571 aa7.46□□□□□ -1.22
PTPN2-209ENST00000589444 LAS1LQ9Y4W2 734 aaKnown RBP7.46□□□□□ -1.22
PTPN2-209ENST00000589444 POTEMA6NI47 508 aa7.45□□□□□ -1.22
PTPN2-209ENST00000589444 PAK3O75914 559 aaPredicted RBP7.45□□□□□ -1.22
PTPN2-209ENST00000589444 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
PTPN2-209ENST00000589444 MLLT3P42568 568 aaPredicted RBP7.45□□□□□ -1.22
PTPN2-209ENST00000589444 FAM50AQ14320 339 aaKnown RBP7.45□□□□□ -1.22
PTPN2-209ENST00000589444 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
PTPN2-209ENST00000589444 SPDYE5A6NIY4 337 aa7.44□□□□□ -1.22
PTPN2-209ENST00000589444 MCCP23508 829 aa7.44□□□□□ -1.22
PTPN2-209ENST00000589444 CHRM1P11229 460 aaPredicted RBP7.44□□□□□ -1.22
PTPN2-209ENST00000589444 GRIPAP1Q4V328 841 aa7.44□□□□□ -1.22
PTPN2-209ENST00000589444 TMTC2Q8N394 836 aa7.44□□□□□ -1.22
PTPN2-209ENST00000589444 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 CCDC181Q5TID7 509 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 POTEGQ6S5H5 508 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 MORC4Q8TE76 937 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 GNEQ9Y223 722 aaKnown RBP7.43□□□□□ -1.22
PTPN2-209ENST00000589444 NUBP1P53384 320 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 CCDC102AQ96A19 550 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 SGSM3Q96HU1 749 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
PTPN2-209ENST00000589444 HMGB1P1B2RPK0 211 aaPredicted RBP7.42□□□□□ -1.22
PTPN2-209ENST00000589444 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
PTPN2-209ENST00000589444 MAMSTRQ6ZN01 415 aa7.42□□□□□ -1.22
PTPN2-209ENST00000589444 RALBP1Q15311 655 aa7.41□□□□□ -1.22
PTPN2-209ENST00000589444 METTL14Q9HCE5 456 aaKnown RBP7.41□□□□□ -1.22
PTPN2-209ENST00000589444 TERF2IPQ9NYB0 399 aa7.41□□□□□ -1.22
PTPN2-209ENST00000589444 DNAJC14Q6Y2X3 702 aaPredicted RBP7.41□□□□□ -1.22
PTPN2-209ENST00000589444 GPR37O15354 613 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms