RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 MLECQ14165 292 aa18.13■□□□□ 0.49
DNMT1-218ENST00000589294 SIGLEC1Q9BZZ2 1709 aa18.12■□□□□ 0.49
DNMT1-218ENST00000589294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
DNMT1-218ENST00000589294 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
DNMT1-218ENST00000589294 KANK1Q14678 1352 aa18.1■□□□□ 0.49
DNMT1-218ENST00000589294 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
DNMT1-218ENST00000589294 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
DNMT1-218ENST00000589294 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
DNMT1-218ENST00000589294 NUP155O75694 1391 aa18.08■□□□□ 0.49
DNMT1-218ENST00000589294 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
DNMT1-218ENST00000589294 DEPDC5O75140 1603 aa18.06■□□□□ 0.48
DNMT1-218ENST00000589294 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
DNMT1-218ENST00000589294 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
DNMT1-218ENST00000589294 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
DNMT1-218ENST00000589294 UNC13BO14795 1591 aa18.04■□□□□ 0.48
DNMT1-218ENST00000589294 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
DNMT1-218ENST00000589294 MROH1Q8NDA8 1641 aa18.03■□□□□ 0.48
DNMT1-218ENST00000589294 VWDEQ8N2E2 1590 aa18.02■□□□□ 0.48
DNMT1-218ENST00000589294 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
DNMT1-218ENST00000589294 LMTK2Q8IWU2 1503 aa18■□□□□ 0.47
DNMT1-218ENST00000589294 KDM4FA0A1W2PPD8 638 aa18■□□□□ 0.47
DNMT1-218ENST00000589294 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
DNMT1-218ENST00000589294 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
DNMT1-218ENST00000589294 ZMYM3Q14202 1370 aa18■□□□□ 0.47
DNMT1-218ENST00000589294 ABCC3O15438 1527 aa17.99■□□□□ 0.47
DNMT1-218ENST00000589294 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
DNMT1-218ENST00000589294 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
DNMT1-218ENST00000589294 ZC3H13Q5T200 1668 aaKnown RBP17.96■□□□□ 0.47
DNMT1-218ENST00000589294 PZPP20742 1482 aa17.95■□□□□ 0.46
DNMT1-218ENST00000589294 PKD2Q13563 968 aa17.95■□□□□ 0.46
DNMT1-218ENST00000589294 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
DNMT1-218ENST00000589294 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
DNMT1-218ENST00000589294 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
DNMT1-218ENST00000589294 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
DNMT1-218ENST00000589294 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
DNMT1-218ENST00000589294 TET3O43151 1660 aa17.92■□□□□ 0.46
DNMT1-218ENST00000589294 PTPRMP28827 1452 aa17.91■□□□□ 0.46
DNMT1-218ENST00000589294 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
DNMT1-218ENST00000589294 NPATQ14207 1427 aa17.9■□□□□ 0.46
DNMT1-218ENST00000589294 CEP152O94986 1710 aa17.9■□□□□ 0.46
DNMT1-218ENST00000589294 EFCAB6Q5THR3 1501 aa17.9■□□□□ 0.46
DNMT1-218ENST00000589294 FBXO31Q5XUX0 539 aaPredicted RBP17.89■□□□□ 0.45
DNMT1-218ENST00000589294 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.45
DNMT1-218ENST00000589294 RIMS1Q86UR5 1692 aaKnown RBP17.89■□□□□ 0.45
DNMT1-218ENST00000589294 PTPRTO14522 1441 aa17.85■□□□□ 0.45
DNMT1-218ENST00000589294 C3P01024 1663 aa17.85■□□□□ 0.45
DNMT1-218ENST00000589294 FOXD1Q16676 465 aa17.85■□□□□ 0.45
DNMT1-218ENST00000589294 DHX57Q6P158 1386 aaKnown RBP17.85■□□□□ 0.45
DNMT1-218ENST00000589294 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
DNMT1-218ENST00000589294 E9PCH4 1651 aa17.84■□□□□ 0.45
DNMT1-218ENST00000589294 NOS1P29475 1434 aa17.84■□□□□ 0.45
DNMT1-218ENST00000589294 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
DNMT1-218ENST00000589294 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
DNMT1-218ENST00000589294 TNRQ92752 1358 aa17.82■□□□□ 0.44
DNMT1-218ENST00000589294 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
DNMT1-218ENST00000589294 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
DNMT1-218ENST00000589294 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
DNMT1-218ENST00000589294 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
DNMT1-218ENST00000589294 CFAP65Q6ZU64 1925 aaKnown RBP17.79■□□□□ 0.44
DNMT1-218ENST00000589294 IDI1Q13907 227 aa17.79■□□□□ 0.44
DNMT1-218ENST00000589294 PREX1Q8TCU6 1659 aa17.79■□□□□ 0.44
DNMT1-218ENST00000589294 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
DNMT1-218ENST00000589294 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
DNMT1-218ENST00000589294 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
DNMT1-218ENST00000589294 TRPM2O94759 1503 aa17.75■□□□□ 0.43
DNMT1-218ENST00000589294 CCDC144AA2RUR9 1427 aa17.74■□□□□ 0.43
DNMT1-218ENST00000589294 SPHKAPQ2M3C7 1700 aa17.74■□□□□ 0.43
DNMT1-218ENST00000589294 SYNMO15061 1565 aa17.74■□□□□ 0.43
DNMT1-218ENST00000589294 THEMISQ8N1K5 641 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-218ENST00000589294 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
DNMT1-218ENST00000589294 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
DNMT1-218ENST00000589294 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
DNMT1-218ENST00000589294 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
DNMT1-218ENST00000589294 AEBP2Q6ZN18 517 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-218ENST00000589294 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
DNMT1-218ENST00000589294 UGGT1Q9NYU2 1555 aa17.67■□□□□ 0.42
DNMT1-218ENST00000589294 SIN3AQ96ST3 1273 aa17.67■□□□□ 0.42
DNMT1-218ENST00000589294 CLTCL1P53675 1640 aa17.66■□□□□ 0.42
DNMT1-218ENST00000589294 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
DNMT1-218ENST00000589294 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
DNMT1-218ENST00000589294 NEUROD1Q13562 356 aa17.65■□□□□ 0.42
DNMT1-218ENST00000589294 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
DNMT1-218ENST00000589294 KDM5AP29375 1690 aaKnown RBP17.64■□□□□ 0.42
DNMT1-218ENST00000589294 CEP170BQ9Y4F5 1589 aaPredicted RBP17.64■□□□□ 0.41
DNMT1-218ENST00000589294 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
DNMT1-218ENST00000589294 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
DNMT1-218ENST00000589294 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
DNMT1-218ENST00000589294 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
DNMT1-218ENST00000589294 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
DNMT1-218ENST00000589294 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
DNMT1-218ENST00000589294 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
DNMT1-218ENST00000589294 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-218ENST00000589294 KIF1BO60333 1816 aa17.61■□□□□ 0.41
DNMT1-218ENST00000589294 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
DNMT1-218ENST00000589294 TIMELESSQ9UNS1 1208 aa17.61■□□□□ 0.41
DNMT1-218ENST00000589294 TMEM2Q9UHN6 1383 aa17.61■□□□□ 0.41
DNMT1-218ENST00000589294 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
DNMT1-218ENST00000589294 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
DNMT1-218ENST00000589294 UBR1Q8IWV7 1749 aa17.6■□□□□ 0.41
DNMT1-218ENST00000589294 ANKLE2Q86XL3 938 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms