RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 CLTCQ00610 1675 aaKnown RBP38.07■■■■□ 3.68
CIRBP-223ENST00000589266 ARHGEF5Q12774 1597 aa38.06■■■■□ 3.68
CIRBP-223ENST00000589266 ATP7AQ04656 1500 aa38.05■■■■□ 3.68
CIRBP-223ENST00000589266 MBD5Q9P267 1494 aa38.04■■■■□ 3.68
CIRBP-223ENST00000589266 A2MP01023 1474 aa38.03■■■■□ 3.68
CIRBP-223ENST00000589266 MYO3AQ8NEV4 1616 aa38.03■■■■□ 3.68
CIRBP-223ENST00000589266 ZNF142P52746 1687 aaPredicted RBP38.03■■■■□ 3.68
CIRBP-223ENST00000589266 PTPRKQ15262 1439 aa38.03■■■■□ 3.68
CIRBP-223ENST00000589266 GGT6Q6P531 493 aa38.02■■■■□ 3.68
CIRBP-223ENST00000589266 PLXNC1O60486 1568 aa38.01■■■■□ 3.67
CIRBP-223ENST00000589266 CEP170BQ9Y4F5 1589 aaPredicted RBP38■■■■□ 3.67
CIRBP-223ENST00000589266 DNMT1P26358 1616 aaKnown RBP38■■■■□ 3.67
CIRBP-223ENST00000589266 PPP6R1Q9UPN7 881 aa37.98■■■■□ 3.67
CIRBP-223ENST00000589266 INO80Q9ULG1 1556 aaPredicted RBP37.97■■■■□ 3.67
CIRBP-223ENST00000589266 CCDC141Q6ZP82 1450 aa37.96■■■■□ 3.67
CIRBP-223ENST00000589266 DAPK1P53355 1430 aa37.95■■■■□ 3.67
CIRBP-223ENST00000589266 ABCC5O15440 1437 aa37.93■■■■□ 3.66
CIRBP-223ENST00000589266 SHANK2Q9UPX8 1470 aa37.9■■■■□ 3.66
CIRBP-223ENST00000589266 CROCC2H7BZ55 1655 aa37.88■■■■□ 3.65
CIRBP-223ENST00000589266 ADGBQ8N7X0 1667 aa37.85■■■■□ 3.65
CIRBP-223ENST00000589266 TSPY4P0CV99 314 aa37.85■■■■□ 3.65
CIRBP-223ENST00000589266 TSPY10P0CW01 314 aa37.85■■■■□ 3.65
CIRBP-223ENST00000589266 A2ML1A8K2U0 1454 aa37.84■■■■□ 3.65
CIRBP-223ENST00000589266 MAST1Q9Y2H9 1570 aa37.84■■■■□ 3.65
CIRBP-223ENST00000589266 RTEL1-TNFRSF6BF6WH68 1400 aa37.79■■■■□ 3.64
CIRBP-223ENST00000589266 ITGAEP38570 1179 aa37.77■■■■□ 3.64
CIRBP-223ENST00000589266 SCAF1Q9H7N4 1312 aaKnown RBP37.77■■■■□ 3.64
CIRBP-223ENST00000589266 ROCK1Q13464 1354 aa37.76■■■■□ 3.64
CIRBP-223ENST00000589266 TOM1O60784 492 aa37.75■■■■□ 3.63
CIRBP-223ENST00000589266 ADGRL2O95490 1459 aa37.75■■■■□ 3.63
CIRBP-223ENST00000589266 HSPA1LP34931 641 aa37.74■■■■□ 3.63
CIRBP-223ENST00000589266 PIP4K2BP78356 416 aa37.73■■■■□ 3.63
CIRBP-223ENST00000589266 DHX29Q7Z478 1369 aaKnown RBP37.72■■■■□ 3.63
CIRBP-223ENST00000589266 CPS1P31327 1500 aa37.71■■■■□ 3.63
CIRBP-223ENST00000589266 TNRQ92752 1358 aa37.69■■■■□ 3.62
CIRBP-223ENST00000589266 ANKRD30AQ9BXX3 1397 aa37.69■■■■□ 3.62
CIRBP-223ENST00000589266 FBXO31Q5XUX0 539 aaPredicted RBP37.68■■■■□ 3.62
CIRBP-223ENST00000589266 POLR1AO95602 1720 aaPredicted RBP37.67■■■■□ 3.62
CIRBP-223ENST00000589266 KIF3BO15066 747 aa37.66■■■■□ 3.62
CIRBP-223ENST00000589266 CHIC2Q9UKJ5 165 aa37.64■■■■□ 3.62
CIRBP-223ENST00000589266 MED1Q15648 1581 aaPredicted RBP37.63■■■■□ 3.62
CIRBP-223ENST00000589266 NEURL4Q96JN8 1562 aa37.63■■■■□ 3.62
CIRBP-223ENST00000589266 ANKLE2Q86XL3 938 aa37.63■■■■□ 3.61
CIRBP-223ENST00000589266 PZPP20742 1482 aa37.61■■■■□ 3.61
CIRBP-223ENST00000589266 PCGF6Q9BYE7 350 aa37.61■■■■□ 3.61
CIRBP-223ENST00000589266 THEMISQ8N1K5 641 aaPredicted RBP37.6■■■■□ 3.61
CIRBP-223ENST00000589266 HFM1A2PYH4 1435 aa37.59■■■■□ 3.61
CIRBP-223ENST00000589266 WASHC2CQ9Y4E1 1318 aa37.59■■■■□ 3.61
CIRBP-223ENST00000589266 KDM5DQ9BY66 1539 aa37.57■■■■□ 3.61
CIRBP-223ENST00000589266 FAM135AQ9P2D6 1515 aa37.57■■■■□ 3.61
CIRBP-223ENST00000589266 KIF15Q9NS87 1388 aa37.54■■■■□ 3.6
CIRBP-223ENST00000589266 GCC2Q8IWJ2 1684 aa37.52■■■■□ 3.6
CIRBP-223ENST00000589266 NAIPQ13075 1403 aa37.52■■■■□ 3.6
CIRBP-223ENST00000589266 DUOX2Q9NRD8 1548 aa37.51■■■■□ 3.6
CIRBP-223ENST00000589266 RRP7BPQ9NSQ0 103 aa37.51■■■■□ 3.6
CIRBP-223ENST00000589266 NLRP1Q9C000 1473 aa37.5■■■■□ 3.59
CIRBP-223ENST00000589266 VWDEQ8N2E2 1590 aa37.5■■■■□ 3.59
CIRBP-223ENST00000589266 NPHP4O75161 1426 aaPredicted RBP37.48■■■■□ 3.59
CIRBP-223ENST00000589266 UGGT1Q9NYU2 1555 aa37.47■■■■□ 3.59
CIRBP-223ENST00000589266 MED14O60244 1454 aa37.47■■■■□ 3.59
CIRBP-223ENST00000589266 SETD5Q9C0A6 1442 aa37.46■■■■□ 3.59
CIRBP-223ENST00000589266 PHF23Q9BUL5 403 aaPredicted RBP37.46■■■■□ 3.59
CIRBP-223ENST00000589266 DEPDC5O75140 1603 aa37.44■■■■□ 3.58
CIRBP-223ENST00000589266 ERBINQ96RT1 1412 aa37.44■■■■□ 3.58
CIRBP-223ENST00000589266 ANKRD50Q9ULJ7 1429 aa37.43■■■■□ 3.58
CIRBP-223ENST00000589266 ACIN1Q9UKV3 1341 aaKnown RBP37.41■■■■□ 3.58
CIRBP-223ENST00000589266 HRCP23327 699 aa37.4■■■■□ 3.58
CIRBP-223ENST00000589266 ALKQ9UM73 1620 aa37.38■■■■□ 3.57
CIRBP-223ENST00000589266 IQGAP1P46940 1657 aa37.36■■■■□ 3.57
CIRBP-223ENST00000589266 EIF2AK4Q9P2K8 1649 aaKnown RBP37.36■■■■□ 3.57
CIRBP-223ENST00000589266 RAB3GAP2Q9H2M9 1393 aa37.31■■■■□ 3.56
CIRBP-223ENST00000589266 LRRC7Q96NW7 1537 aa37.29■■■■□ 3.56
CIRBP-223ENST00000589266 SENP3Q9H4L4 574 aaPredicted RBP37.27■■■■□ 3.56
CIRBP-223ENST00000589266 STRCP1A6NGW2 1772 aa37.27■■■■□ 3.56
CIRBP-223ENST00000589266 ABCC3O15438 1527 aa37.23■■■■□ 3.55
CIRBP-223ENST00000589266 RNF17Q9BXT8 1623 aaKnown RBP37.22■■■■□ 3.55
CIRBP-223ENST00000589266 SYNMO15061 1565 aa37.21■■■■□ 3.55
CIRBP-223ENST00000589266 ZC3H13Q5T200 1668 aaKnown RBP37.21■■■■□ 3.55
CIRBP-223ENST00000589266 ERVK-7P63135 1459 aa37.2■■■■□ 3.54
CIRBP-223ENST00000589266 UNC13BO14795 1591 aa37.17■■■■□ 3.54
CIRBP-223ENST00000589266 CFAP65Q6ZU64 1925 aaKnown RBP37.14■■■■□ 3.54
CIRBP-223ENST00000589266 SCAF11Q99590 1463 aaKnown RBP37.11■■■■□ 3.53
CIRBP-223ENST00000589266 PRDM15P57071 1507 aaPredicted RBP37.1■■■■□ 3.53
CIRBP-223ENST00000589266 UBR1Q8IWV7 1749 aa37.1■■■■□ 3.53
CIRBP-223ENST00000589266 TXNDC2Q86VQ3 553 aa37.08■■■■□ 3.53
CIRBP-223ENST00000589266 MROH1Q8NDA8 1641 aa37.07■■■■□ 3.53
CIRBP-223ENST00000589266 LTKP29376 864 aa37.06■■■■□ 3.52
CIRBP-223ENST00000589266 NUP155O75694 1391 aa37.04■■■■□ 3.52
CIRBP-223ENST00000589266 KANK1Q14678 1352 aa37.04■■■■□ 3.52
CIRBP-223ENST00000589266 TRIM52Q96A61 297 aa37.04■■■■□ 3.52
CIRBP-223ENST00000589266 RGS17Q9UGC6 210 aaPredicted RBP37.04■■■■□ 3.52
CIRBP-223ENST00000589266 CEP152O94986 1710 aa37.04■■■■□ 3.52
CIRBP-223ENST00000589266 IQGAP3Q86VI3 1631 aa37.02■■■■□ 3.52
CIRBP-223ENST00000589266 ARHGAP23Q9P227 1491 aa37.01■■■■□ 3.52
CIRBP-223ENST00000589266 EID1Q9Y6B2 187 aa37.01■■■■□ 3.52
CIRBP-223ENST00000589266 SLIT1O75093 1534 aa37■■■■□ 3.51
CIRBP-223ENST00000589266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.97■■■■□ 3.51
CIRBP-223ENST00000589266 XIRP1Q702N8 1843 aaKnown RBP36.96■■■■□ 3.51
CIRBP-223ENST00000589266 LMTK2Q8IWU2 1503 aa36.95■■■■□ 3.51
CIRBP-223ENST00000589266 ARHGAP31Q2M1Z3 1444 aa36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms