RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 MYOM3Q5VTT5 1437 aa14.97□□□□□ -0.01
APOC1-204ENST00000589078 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
APOC1-204ENST00000589078 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
APOC1-204ENST00000589078 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
APOC1-204ENST00000589078 MIA2Q96PC5 1412 aa14.96□□□□□ -0.01
APOC1-204ENST00000589078 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
APOC1-204ENST00000589078 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
APOC1-204ENST00000589078 NEURL4Q96JN8 1562 aa14.94□□□□□ -0.02
APOC1-204ENST00000589078 HSPA1LP34931 641 aa14.94□□□□□ -0.02
APOC1-204ENST00000589078 A2ML1A8K2U0 1454 aa14.94□□□□□ -0.02
APOC1-204ENST00000589078 CPS1P31327 1500 aa14.93□□□□□ -0.02
APOC1-204ENST00000589078 CAMSAP2Q08AD1 1489 aa14.93□□□□□ -0.02
APOC1-204ENST00000589078 PIP4K2BP78356 416 aa14.92□□□□□ -0.02
APOC1-204ENST00000589078 GGT6Q6P531 493 aa14.92□□□□□ -0.02
APOC1-204ENST00000589078 MBD5Q9P267 1494 aa14.91□□□□□ -0.02
APOC1-204ENST00000589078 TSPY4P0CV99 314 aa14.91□□□□□ -0.02
APOC1-204ENST00000589078 TSPY10P0CW01 314 aa14.91□□□□□ -0.02
APOC1-204ENST00000589078 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
APOC1-204ENST00000589078 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
APOC1-204ENST00000589078 FGD6Q6ZV73 1430 aa14.88□□□□□ -0.03
APOC1-204ENST00000589078 VWDEQ8N2E2 1590 aa14.88□□□□□ -0.03
APOC1-204ENST00000589078 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
APOC1-204ENST00000589078 RTEL1-TNFRSF6BF6WH68 1400 aa14.87□□□□□ -0.03
APOC1-204ENST00000589078 TOM1O60784 492 aa14.87□□□□□ -0.03
APOC1-204ENST00000589078 ARHGEF5Q12774 1597 aa14.85□□□□□ -0.03
APOC1-204ENST00000589078 KDM5DQ9BY66 1539 aa14.85□□□□□ -0.03
APOC1-204ENST00000589078 TNRQ92752 1358 aa14.85□□□□□ -0.03
APOC1-204ENST00000589078 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
APOC1-204ENST00000589078 PZPP20742 1482 aa14.83□□□□□ -0.03
APOC1-204ENST00000589078 FAM50AQ14320 339 aaKnown RBP14.83□□□□□ -0.04
APOC1-204ENST00000589078 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
APOC1-204ENST00000589078 DEPDC5O75140 1603 aa14.83□□□□□ -0.04
APOC1-204ENST00000589078 PTPN23Q9H3S7 1636 aa14.82□□□□□ -0.04
APOC1-204ENST00000589078 IQGAP1P46940 1657 aa14.82□□□□□ -0.04
APOC1-204ENST00000589078 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
APOC1-204ENST00000589078 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
APOC1-204ENST00000589078 STRCP1A6NGW2 1772 aa14.81□□□□□ -0.04
APOC1-204ENST00000589078 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
APOC1-204ENST00000589078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
APOC1-204ENST00000589078 MED14O60244 1454 aa14.8□□□□□ -0.04
APOC1-204ENST00000589078 SYNMO15061 1565 aa14.8□□□□□ -0.04
APOC1-204ENST00000589078 UGGT1Q9NYU2 1555 aa14.8□□□□□ -0.04
APOC1-204ENST00000589078 NPHP4O75161 1426 aaPredicted RBP14.79□□□□□ -0.04
APOC1-204ENST00000589078 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
APOC1-204ENST00000589078 NLRP1Q9C000 1473 aa14.78□□□□□ -0.04
APOC1-204ENST00000589078 ABCC5O15440 1437 aa14.78□□□□□ -0.04
APOC1-204ENST00000589078 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
APOC1-204ENST00000589078 DAPK1P53355 1430 aa14.77□□□□□ -0.04
APOC1-204ENST00000589078 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
APOC1-204ENST00000589078 KIF3BO15066 747 aa14.76□□□□□ -0.05
APOC1-204ENST00000589078 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
APOC1-204ENST00000589078 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
APOC1-204ENST00000589078 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
APOC1-204ENST00000589078 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
APOC1-204ENST00000589078 ZC3H13Q5T200 1668 aaKnown RBP14.74□□□□□ -0.05
APOC1-204ENST00000589078 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
APOC1-204ENST00000589078 WASHC2CQ9Y4E1 1318 aa14.73□□□□□ -0.05
APOC1-204ENST00000589078 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
APOC1-204ENST00000589078 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
APOC1-204ENST00000589078 XIRP1Q702N8 1843 aaKnown RBP14.7□□□□□ -0.06
APOC1-204ENST00000589078 DUOX2Q9NRD8 1548 aa14.7□□□□□ -0.06
APOC1-204ENST00000589078 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
APOC1-204ENST00000589078 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
APOC1-204ENST00000589078 ABCC3O15438 1527 aa14.69□□□□□ -0.06
APOC1-204ENST00000589078 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
APOC1-204ENST00000589078 ITGAEP38570 1179 aa14.67□□□□□ -0.06
APOC1-204ENST00000589078 RGS17Q9UGC6 210 aaPredicted RBP14.67□□□□□ -0.06
APOC1-204ENST00000589078 ADGRL2O95490 1459 aa14.67□□□□□ -0.06
APOC1-204ENST00000589078 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
APOC1-204ENST00000589078 CROCC2H7BZ55 1655 aa14.67□□□□□ -0.06
APOC1-204ENST00000589078 CEP152O94986 1710 aa14.66□□□□□ -0.06
APOC1-204ENST00000589078 ROCK1Q13464 1354 aa14.65□□□□□ -0.06
APOC1-204ENST00000589078 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
APOC1-204ENST00000589078 EIF2AK4Q9P2K8 1649 aaKnown RBP14.65□□□□□ -0.06
APOC1-204ENST00000589078 SCAF11Q99590 1463 aaKnown RBP14.64□□□□□ -0.07
APOC1-204ENST00000589078 CFAP65Q6ZU64 1925 aaKnown RBP14.63□□□□□ -0.07
APOC1-204ENST00000589078 KANK1Q14678 1352 aa14.62□□□□□ -0.07
APOC1-204ENST00000589078 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
APOC1-204ENST00000589078 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
APOC1-204ENST00000589078 SLIT1O75093 1534 aa14.61□□□□□ -0.07
APOC1-204ENST00000589078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.071e-9■□□□□ 8.7
APOC1-204ENST00000589078 ARHGAP23Q9P227 1491 aa14.6□□□□□ -0.07
APOC1-204ENST00000589078 ROBO1Q9Y6N7 1651 aa14.59□□□□□ -0.07
APOC1-204ENST00000589078 POTEAQ6S8J7 498 aa14.58□□□□□ -0.08
APOC1-204ENST00000589078 PIK3C2BO00750 1634 aa14.57□□□□□ -0.08
APOC1-204ENST00000589078 LTKP29376 864 aa14.57□□□□□ -0.08
APOC1-204ENST00000589078 FAM135BQ49AJ0 1406 aa14.57□□□□□ -0.08
APOC1-204ENST00000589078 PRDM15P57071 1507 aaPredicted RBP14.55□□□□□ -0.08
APOC1-204ENST00000589078 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
APOC1-204ENST00000589078 TMEM94Q12767 1356 aa14.52□□□□□ -0.08
APOC1-204ENST00000589078 KDM5AP29375 1690 aaKnown RBP14.52□□□□□ -0.09
APOC1-204ENST00000589078 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
APOC1-204ENST00000589078 PHLPP1O60346 1717 aa14.51□□□□□ -0.09
APOC1-204ENST00000589078 ARHGAP31Q2M1Z3 1444 aa14.5□□□□□ -0.09
APOC1-204ENST00000589078 TMEM2Q9UHN6 1383 aa14.5□□□□□ -0.09
APOC1-204ENST00000589078 NWD1Q149M9 1564 aa14.5□□□□□ -0.09
APOC1-204ENST00000589078 EFCAB6Q5THR3 1501 aa14.5□□□□□ -0.09
APOC1-204ENST00000589078 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
APOC1-204ENST00000589078 LMTK2Q8IWU2 1503 aa14.49□□□□□ -0.09
APOC1-204ENST00000589078 NAIPQ13075 1403 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms