RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FER1L4A9Z1Z3 1794 aa29.45■■■□□ 2.31
CIRBP-220ENST00000588917 PPP6R1Q9UPN7 881 aa29.45■■■□□ 2.31
CIRBP-220ENST00000588917 ERBINQ96RT1 1412 aa29.44■■■□□ 2.3
CIRBP-220ENST00000588917 ANKRD50Q9ULJ7 1429 aa29.4■■■□□ 2.3
CIRBP-220ENST00000588917 CEBPAP49715 358 aaPredicted RBP29.4■■■□□ 2.3
CIRBP-220ENST00000588917 TRIM26Q12899 539 aaPredicted RBP29.4■■■□□ 2.3
CIRBP-220ENST00000588917 GGT6Q6P531 493 aa29.4■■■□□ 2.3
CIRBP-220ENST00000588917 ESF1Q9H501 851 aaKnown RBP29.39■■■□□ 2.3
CIRBP-220ENST00000588917 EIF2AK4Q9P2K8 1649 aaKnown RBP29.35■■■□□ 2.29
CIRBP-220ENST00000588917 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
CIRBP-220ENST00000588917 NAIPQ13075 1403 aa29.32■■■□□ 2.28
CIRBP-220ENST00000588917 ACIN1Q9UKV3 1341 aaKnown RBP29.31■■■□□ 2.28
CIRBP-220ENST00000588917 KANK1Q14678 1352 aa29.27■■■□□ 2.28
CIRBP-220ENST00000588917 WASHC2CQ9Y4E1 1318 aa29.27■■■□□ 2.28
CIRBP-220ENST00000588917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.26■■■□□ 2.271e-19■□□□□ 10
CIRBP-220ENST00000588917 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
CIRBP-220ENST00000588917 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
CIRBP-220ENST00000588917 UHRF1BP1Q6BDS2 1440 aa29.23■■■□□ 2.27
CIRBP-220ENST00000588917 CERKQ8TCT0 537 aa29.23■■■□□ 2.27
CIRBP-220ENST00000588917 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
CIRBP-220ENST00000588917 FAM135AQ9P2D6 1515 aa29.22■■■□□ 2.27
CIRBP-220ENST00000588917 DMRT2Q9Y5R5 561 aa29.22■■■□□ 2.27
CIRBP-220ENST00000588917 SETD5Q9C0A6 1442 aa29.21■■■□□ 2.27
CIRBP-220ENST00000588917 GCC2Q8IWJ2 1684 aa29.2■■■□□ 2.26
CIRBP-220ENST00000588917 SETD1BQ9UPS6 1966 aaKnown RBP29.19■■■□□ 2.26
CIRBP-220ENST00000588917 HRCP23327 699 aa29.17■■■□□ 2.26
CIRBP-220ENST00000588917 DEPDC5O75140 1603 aa29.16■■■□□ 2.26
CIRBP-220ENST00000588917 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
CIRBP-220ENST00000588917 KDM5DQ9BY66 1539 aa29.15■■■□□ 2.26
CIRBP-220ENST00000588917 NUP155O75694 1391 aa29.14■■■□□ 2.26
CIRBP-220ENST00000588917 ZMYM3Q14202 1370 aa29.14■■■□□ 2.26
CIRBP-220ENST00000588917 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
CIRBP-220ENST00000588917 MROH1Q8NDA8 1641 aa29.12■■■□□ 2.25
CIRBP-220ENST00000588917 C3P01024 1663 aa29.12■■■□□ 2.25
CIRBP-220ENST00000588917 UNC13BO14795 1591 aa29.09■■■□□ 2.25
CIRBP-220ENST00000588917 ZC3H13Q5T200 1668 aaKnown RBP29.09■■■□□ 2.25
CIRBP-220ENST00000588917 RAB3GAP2Q9H2M9 1393 aa29.08■■■□□ 2.25
CIRBP-220ENST00000588917 ABCC3O15438 1527 aa29.08■■■□□ 2.25
CIRBP-220ENST00000588917 MROH2AA6NES4 1674 aa29.07■■■□□ 2.24
CIRBP-220ENST00000588917 CLTCQ00610 1675 aaKnown RBP29.07■■■□□ 2.24
CIRBP-220ENST00000588917 VWDEQ8N2E2 1590 aa29.07■■■□□ 2.24
CIRBP-220ENST00000588917 STRCQ7RTU9 1775 aa29.06■■■□□ 2.24
CIRBP-220ENST00000588917 LMTK2Q8IWU2 1503 aa29.06■■■□□ 2.24
CIRBP-220ENST00000588917 NPATQ14207 1427 aa29.03■■■□□ 2.24
CIRBP-220ENST00000588917 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
CIRBP-220ENST00000588917 PTPRTO14522 1441 aa29.02■■■□□ 2.24
CIRBP-220ENST00000588917 IQGAP3Q86VI3 1631 aa28.99■■■□□ 2.23
CIRBP-220ENST00000588917 SLC4A1APQ9BWU0 796 aaKnown RBP28.99■■■□□ 2.23
CIRBP-220ENST00000588917 PZPP20742 1482 aa28.98■■■□□ 2.23
CIRBP-220ENST00000588917 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
CIRBP-220ENST00000588917 CEP152O94986 1710 aa28.96■■■□□ 2.23
CIRBP-220ENST00000588917 CAMSAP1Q5T5Y3 1602 aa28.95■■■□□ 2.23
CIRBP-220ENST00000588917 RPRD2Q5VT52 1461 aaKnown RBP28.94■■■□□ 2.22
CIRBP-220ENST00000588917 FBXO31Q5XUX0 539 aaPredicted RBP28.94■■■□□ 2.22
CIRBP-220ENST00000588917 MPHOSPH9Q99550 1183 aa28.94■■■□□ 2.22
CIRBP-220ENST00000588917 TET3O43151 1660 aa28.93■■■□□ 2.22
CIRBP-220ENST00000588917 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
CIRBP-220ENST00000588917 PKD2Q13563 968 aa28.89■■■□□ 2.22
CIRBP-220ENST00000588917 TNRQ92752 1358 aa28.87■■■□□ 2.21
CIRBP-220ENST00000588917 ERVK-7P63135 1459 aa28.85■■■□□ 2.21
CIRBP-220ENST00000588917 SLC52A1Q9NWF4 448 aa28.84■■■□□ 2.21
CIRBP-220ENST00000588917 NCKAP5LQ9HCH0 1330 aa28.83■■■□□ 2.21
CIRBP-220ENST00000588917 SPATA31D1Q6ZQQ2 1576 aa28.82■■■□□ 2.2
CIRBP-220ENST00000588917 NOS1P29475 1434 aa28.81■■■□□ 2.2
CIRBP-220ENST00000588917 E9PCH4 1651 aa28.8■■■□□ 2.2
CIRBP-220ENST00000588917 LTBP4Q8N2S1 1624 aa28.8■■■□□ 2.2
CIRBP-220ENST00000588917 NLRP1Q9C000 1473 aa28.77■■■□□ 2.2
CIRBP-220ENST00000588917 PLA2R1Q13018 1463 aa28.76■■■□□ 2.19
CIRBP-220ENST00000588917 MYO3AQ8NEV4 1616 aa28.75■■■□□ 2.19
CIRBP-220ENST00000588917 CEP170BQ9Y4F5 1589 aaPredicted RBP28.75■■■□□ 2.19
CIRBP-220ENST00000588917 IQSEC2Q5JU85 1478 aa28.73■■■□□ 2.19
CIRBP-220ENST00000588917 IDI1Q13907 227 aa28.73■■■□□ 2.19
CIRBP-220ENST00000588917 ZNF142P52746 1687 aaPredicted RBP28.73■■■□□ 2.19
CIRBP-220ENST00000588917 CFAP65Q6ZU64 1925 aaKnown RBP28.73■■■□□ 2.19
CIRBP-220ENST00000588917 FOXD1Q16676 465 aa28.71■■■□□ 2.19
CIRBP-220ENST00000588917 THEMISQ8N1K5 641 aaPredicted RBP28.7■■■□□ 2.18
CIRBP-220ENST00000588917 STAG3Q9UJ98 1225 aa28.7■■■□□ 2.18
CIRBP-220ENST00000588917 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
CIRBP-220ENST00000588917 A2ML1A8K2U0 1454 aa28.69■■■□□ 2.18
CIRBP-220ENST00000588917 SYNMO15061 1565 aa28.66■■■□□ 2.18
CIRBP-220ENST00000588917 SPHKAPQ2M3C7 1700 aa28.64■■■□□ 2.18
CIRBP-220ENST00000588917 TRPM2O94759 1503 aa28.64■■■□□ 2.17
CIRBP-220ENST00000588917 UGGT1Q9NYU2 1555 aa28.62■■■□□ 2.17
CIRBP-220ENST00000588917 DISP3Q9P2K9 1392 aa28.61■■■□□ 2.17
CIRBP-220ENST00000588917 CCDC144AA2RUR9 1427 aa28.6■■■□□ 2.17
CIRBP-220ENST00000588917 CHGAP10645 457 aaKnown RBP28.6■■■□□ 2.17
CIRBP-220ENST00000588917 ANKRD30BQ9BXX2 1392 aa28.6■■■□□ 2.17
CIRBP-220ENST00000588917 DHX57Q6P158 1386 aaKnown RBP28.59■■■□□ 2.17
CIRBP-220ENST00000588917 HDGFP51858 240 aaKnown RBP28.58■■■□□ 2.17
CIRBP-220ENST00000588917 PIK3C2BO00750 1634 aa28.58■■■□□ 2.17
CIRBP-220ENST00000588917 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
CIRBP-220ENST00000588917 KDM5AP29375 1690 aaKnown RBP28.55■■■□□ 2.16
CIRBP-220ENST00000588917 ANKLE2Q86XL3 938 aa28.54■■■□□ 2.16
CIRBP-220ENST00000588917 EID1Q9Y6B2 187 aa28.52■■■□□ 2.16
CIRBP-220ENST00000588917 ADGRB3O60242 1522 aa28.51■■■□□ 2.15
CIRBP-220ENST00000588917 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
CIRBP-220ENST00000588917 CLTCL1P53675 1640 aa28.5■■■□□ 2.15
CIRBP-220ENST00000588917 UBR1Q8IWV7 1749 aa28.49■■■□□ 2.15
CIRBP-220ENST00000588917 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
CIRBP-220ENST00000588917 TMEM2Q9UHN6 1383 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms