RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
SCAMP4-211ENST00000588907 KIF3BO15066 747 aa25.24■■□□□ 1.63
SCAMP4-211ENST00000588907 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
SCAMP4-211ENST00000588907 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
SCAMP4-211ENST00000588907 KANK1Q14678 1352 aa25.2■■□□□ 1.63
SCAMP4-211ENST00000588907 ARID4BQ4LE39 1312 aaPredicted RBP25.19■■□□□ 1.62
SCAMP4-211ENST00000588907 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
SCAMP4-211ENST00000588907 SIGLEC1Q9BZZ2 1709 aa25.19■■□□□ 1.62
SCAMP4-211ENST00000588907 MROH1Q8NDA8 1641 aa25.16■■□□□ 1.62
SCAMP4-211ENST00000588907 ZC3H13Q5T200 1668 aaKnown RBP25.16■■□□□ 1.62
SCAMP4-211ENST00000588907 IQGAP3Q86VI3 1631 aa25.15■■□□□ 1.62
SCAMP4-211ENST00000588907 NUP155O75694 1391 aa25.14■■□□□ 1.61
SCAMP4-211ENST00000588907 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.61
SCAMP4-211ENST00000588907 GGT6Q6P531 493 aa25.12■■□□□ 1.61
SCAMP4-211ENST00000588907 TRIM52Q96A61 297 aa25.12■■□□□ 1.61
SCAMP4-211ENST00000588907 LMTK2Q8IWU2 1503 aa25.11■■□□□ 1.61
SCAMP4-211ENST00000588907 CNTLNQ9NXG0 1405 aa25.1■■□□□ 1.61
SCAMP4-211ENST00000588907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.61
SCAMP4-211ENST00000588907 ABCC3O15438 1527 aa25.07■■□□□ 1.6
SCAMP4-211ENST00000588907 ESF1Q9H501 851 aaKnown RBP25.07■■□□□ 1.6
SCAMP4-211ENST00000588907 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
SCAMP4-211ENST00000588907 TET3O43151 1660 aa25.06■■□□□ 1.6
SCAMP4-211ENST00000588907 PZPP20742 1482 aa25.04■■□□□ 1.6
SCAMP4-211ENST00000588907 MLECQ14165 292 aa25.03■■□□□ 1.6
SCAMP4-211ENST00000588907 CEP152O94986 1710 aa25.03■■□□□ 1.6
SCAMP4-211ENST00000588907 FER1L4A9Z1Z3 1794 aa25.03■■□□□ 1.6
SCAMP4-211ENST00000588907 MROH2AA6NES4 1674 aa25.02■■□□□ 1.6
SCAMP4-211ENST00000588907 SLC4A1APQ9BWU0 796 aaKnown RBP25.02■■□□□ 1.6
SCAMP4-211ENST00000588907 EFCAB6Q5THR3 1501 aa25.02■■□□□ 1.6
SCAMP4-211ENST00000588907 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
SCAMP4-211ENST00000588907 CAMSAP1Q5T5Y3 1602 aa25.01■■□□□ 1.59
SCAMP4-211ENST00000588907 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
SCAMP4-211ENST00000588907 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
SCAMP4-211ENST00000588907 ARHGAP31Q2M1Z3 1444 aa25■■□□□ 1.59
SCAMP4-211ENST00000588907 CLTCQ00610 1675 aaKnown RBP25■■□□□ 1.59
SCAMP4-211ENST00000588907 MADDQ8WXG6 1647 aa24.95■■□□□ 1.58
SCAMP4-211ENST00000588907 DHX57Q6P158 1386 aaKnown RBP24.94■■□□□ 1.58
SCAMP4-211ENST00000588907 E9PCH4 1651 aa24.92■■□□□ 1.58
SCAMP4-211ENST00000588907 PKD2Q13563 968 aa24.92■■□□□ 1.58
SCAMP4-211ENST00000588907 NPATQ14207 1427 aa24.91■■□□□ 1.58
SCAMP4-211ENST00000588907 RIMS1Q86UR5 1692 aaKnown RBP24.9■■□□□ 1.58
SCAMP4-211ENST00000588907 ZMYM3Q14202 1370 aa24.9■■□□□ 1.58
SCAMP4-211ENST00000588907 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
SCAMP4-211ENST00000588907 SPHKAPQ2M3C7 1700 aa24.85■■□□□ 1.57
SCAMP4-211ENST00000588907 C3P01024 1663 aa24.85■■□□□ 1.57
SCAMP4-211ENST00000588907 PTPRTO14522 1441 aa24.84■■□□□ 1.57
SCAMP4-211ENST00000588907 PREX1Q8TCU6 1659 aa24.84■■□□□ 1.57
SCAMP4-211ENST00000588907 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
SCAMP4-211ENST00000588907 ERVK-7P63135 1459 aa24.83■■□□□ 1.56
SCAMP4-211ENST00000588907 TRPM2O94759 1503 aa24.82■■□□□ 1.56
SCAMP4-211ENST00000588907 NOS1P29475 1434 aa24.82■■□□□ 1.56
SCAMP4-211ENST00000588907 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
SCAMP4-211ENST00000588907 PTPRMP28827 1452 aa24.8■■□□□ 1.56
SCAMP4-211ENST00000588907 ANKRD30BQ9BXX2 1392 aa24.8■■□□□ 1.56
SCAMP4-211ENST00000588907 FOXD1Q16676 465 aa24.76■■□□□ 1.55
SCAMP4-211ENST00000588907 CCDC144AA2RUR9 1427 aa24.76■■□□□ 1.55
SCAMP4-211ENST00000588907 SLC52A1Q9NWF4 448 aa24.75■■□□□ 1.55
SCAMP4-211ENST00000588907 CFAP65Q6ZU64 1925 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-211ENST00000588907 TNRQ92752 1358 aa24.74■■□□□ 1.55
SCAMP4-211ENST00000588907 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
SCAMP4-211ENST00000588907 SYNMO15061 1565 aa24.73■■□□□ 1.55
SCAMP4-211ENST00000588907 KDM4FA0A1W2PPD8 638 aa24.73■■□□□ 1.55
SCAMP4-211ENST00000588907 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
SCAMP4-211ENST00000588907 NLRP1Q9C000 1473 aa24.71■■□□□ 1.55
SCAMP4-211ENST00000588907 FBXO31Q5XUX0 539 aaPredicted RBP24.71■■□□□ 1.55
SCAMP4-211ENST00000588907 SETD1BQ9UPS6 1966 aaKnown RBP24.7■■□□□ 1.54
SCAMP4-211ENST00000588907 CEBPAP49715 358 aaPredicted RBP24.69■■□□□ 1.54
SCAMP4-211ENST00000588907 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
SCAMP4-211ENST00000588907 NEURL4Q96JN8 1562 aa24.67■■□□□ 1.54
SCAMP4-211ENST00000588907 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-211ENST00000588907 KIF1BO60333 1816 aa24.65■■□□□ 1.54
SCAMP4-211ENST00000588907 MYO3AQ8NEV4 1616 aa24.64■■□□□ 1.54
SCAMP4-211ENST00000588907 UGGT1Q9NYU2 1555 aa24.62■■□□□ 1.53
SCAMP4-211ENST00000588907 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
SCAMP4-211ENST00000588907 ADGRB3O60242 1522 aa24.61■■□□□ 1.53
SCAMP4-211ENST00000588907 ZNF142P52746 1687 aaPredicted RBP24.6■■□□□ 1.53
SCAMP4-211ENST00000588907 IDI1Q13907 227 aa24.6■■□□□ 1.53
SCAMP4-211ENST00000588907 A2ML1A8K2U0 1454 aa24.59■■□□□ 1.53
SCAMP4-211ENST00000588907 UHRF1BP1Q6BDS2 1440 aa24.59■■□□□ 1.53
SCAMP4-211ENST00000588907 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
SCAMP4-211ENST00000588907 CEP170BQ9Y4F5 1589 aaPredicted RBP24.58■■□□□ 1.52
SCAMP4-211ENST00000588907 SPATA31E1Q6ZUB1 1445 aa24.56■■□□□ 1.52
SCAMP4-211ENST00000588907 STAG3Q9UJ98 1225 aa24.56■■□□□ 1.52
SCAMP4-211ENST00000588907 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
SCAMP4-211ENST00000588907 SIN3AQ96ST3 1273 aa24.55■■□□□ 1.52
SCAMP4-211ENST00000588907 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
SCAMP4-211ENST00000588907 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
SCAMP4-211ENST00000588907 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
SCAMP4-211ENST00000588907 CHGAP10645 457 aaKnown RBP24.51■■□□□ 1.51
SCAMP4-211ENST00000588907 STAC3Q96MF2 364 aa24.51■■□□□ 1.51
SCAMP4-211ENST00000588907 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
SCAMP4-211ENST00000588907 THEMISQ8N1K5 641 aaPredicted RBP24.49■■□□□ 1.51
SCAMP4-211ENST00000588907 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
SCAMP4-211ENST00000588907 MYO5BQ9ULV0 1848 aa24.47■■□□□ 1.51
SCAMP4-211ENST00000588907 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
SCAMP4-211ENST00000588907 SLIT1O75093 1534 aa24.45■■□□□ 1.5
SCAMP4-211ENST00000588907 ZEB1P37275 1124 aaPredicted RBP24.44■■□□□ 1.5
SCAMP4-211ENST00000588907 TMEM2Q9UHN6 1383 aa24.43■■□□□ 1.5
SCAMP4-211ENST00000588907 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
SCAMP4-211ENST00000588907 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms