RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 EIF2AK4Q9P2K8 1649 aaKnown RBP21.3■■□□□ 1
NPC1-207ENST00000588867 GGT6Q6P531 493 aa21.28■■□□□ 1
NPC1-207ENST00000588867 UNC13BO14795 1591 aa21.28■■□□□ 1
NPC1-207ENST00000588867 ARHGEF40Q8TER5 1519 aa21.27■■□□□ 1
NPC1-207ENST00000588867 PZPP20742 1482 aa21.27■■□□□ 1
NPC1-207ENST00000588867 FOXD1Q16676 465 aa21.25■□□□□ 0.99
NPC1-207ENST00000588867 KANK1Q14678 1352 aa21.25■□□□□ 0.99
NPC1-207ENST00000588867 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
NPC1-207ENST00000588867 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
NPC1-207ENST00000588867 PKD2Q13563 968 aa21.23■□□□□ 0.99
NPC1-207ENST00000588867 FAM135AQ9P2D6 1515 aa21.23■□□□□ 0.99
NPC1-207ENST00000588867 REREQ9P2R6 1566 aa21.22■□□□□ 0.99
NPC1-207ENST00000588867 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
NPC1-207ENST00000588867 BCORL1Q5H9F3 1711 aa21.21■□□□□ 0.99
NPC1-207ENST00000588867 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
NPC1-207ENST00000588867 IQGAP3Q86VI3 1631 aa21.2■□□□□ 0.98
NPC1-207ENST00000588867 RNF17Q9BXT8 1623 aaKnown RBP21.2■□□□□ 0.98
NPC1-207ENST00000588867 MROH1Q8NDA8 1641 aa21.19■□□□□ 0.98
NPC1-207ENST00000588867 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
NPC1-207ENST00000588867 MLECQ14165 292 aa21.19■□□□□ 0.98
NPC1-207ENST00000588867 SIGLEC1Q9BZZ2 1709 aa21.18■□□□□ 0.98
NPC1-207ENST00000588867 AGLP35573 1532 aa21.18■□□□□ 0.98
NPC1-207ENST00000588867 WASHC2CQ9Y4E1 1318 aa21.17■□□□□ 0.98
NPC1-207ENST00000588867 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
NPC1-207ENST00000588867 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
NPC1-207ENST00000588867 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.98
NPC1-207ENST00000588867 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.98
NPC1-207ENST00000588867 CEP152O94986 1710 aa21.12■□□□□ 0.97
NPC1-207ENST00000588867 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
NPC1-207ENST00000588867 TET3O43151 1660 aa21.1■□□□□ 0.97
NPC1-207ENST00000588867 ABCC3O15438 1527 aa21.08■□□□□ 0.97
NPC1-207ENST00000588867 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
NPC1-207ENST00000588867 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
NPC1-207ENST00000588867 E9PCH4 1651 aa21.07■□□□□ 0.96
NPC1-207ENST00000588867 LMTK2Q8IWU2 1503 aa21.07■□□□□ 0.96
NPC1-207ENST00000588867 EFCAB6Q5THR3 1501 aa21.04■□□□□ 0.96
NPC1-207ENST00000588867 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
NPC1-207ENST00000588867 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
NPC1-207ENST00000588867 CFAP65Q6ZU64 1925 aaKnown RBP21.03■□□□□ 0.96
NPC1-207ENST00000588867 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
NPC1-207ENST00000588867 NPATQ14207 1427 aa21■□□□□ 0.95
NPC1-207ENST00000588867 PLA2R1Q13018 1463 aa21■□□□□ 0.95
NPC1-207ENST00000588867 CCDC144AA2RUR9 1427 aa20.98■□□□□ 0.95
NPC1-207ENST00000588867 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
NPC1-207ENST00000588867 RPRD2Q5VT52 1461 aaKnown RBP20.98■□□□□ 0.95
NPC1-207ENST00000588867 SPHKAPQ2M3C7 1700 aa20.97■□□□□ 0.95
NPC1-207ENST00000588867 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
NPC1-207ENST00000588867 PTPRTO14522 1441 aa20.96■□□□□ 0.95
NPC1-207ENST00000588867 ZMYM3Q14202 1370 aa20.94■□□□□ 0.94
NPC1-207ENST00000588867 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
NPC1-207ENST00000588867 FBXO31Q5XUX0 539 aaPredicted RBP20.94■□□□□ 0.94
NPC1-207ENST00000588867 TRPM2O94759 1503 aa20.93■□□□□ 0.94
NPC1-207ENST00000588867 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
NPC1-207ENST00000588867 FER1L4A9Z1Z3 1794 aa20.91■□□□□ 0.94
NPC1-207ENST00000588867 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
NPC1-207ENST00000588867 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
NPC1-207ENST00000588867 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
NPC1-207ENST00000588867 NOS1P29475 1434 aa20.88■□□□□ 0.93
NPC1-207ENST00000588867 UGGT1Q9NYU2 1555 aa20.88■□□□□ 0.93
NPC1-207ENST00000588867 CLTCL1P53675 1640 aa20.88■□□□□ 0.93
NPC1-207ENST00000588867 PREX1Q8TCU6 1659 aa20.88■□□□□ 0.93
NPC1-207ENST00000588867 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
NPC1-207ENST00000588867 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
NPC1-207ENST00000588867 ERVK-7P63135 1459 aa20.86■□□□□ 0.93
NPC1-207ENST00000588867 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
NPC1-207ENST00000588867 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
NPC1-207ENST00000588867 SYNMO15061 1565 aa20.85■□□□□ 0.93
NPC1-207ENST00000588867 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
NPC1-207ENST00000588867 IDI1Q13907 227 aa20.83■□□□□ 0.92
NPC1-207ENST00000588867 SLC52A1Q9NWF4 448 aa20.83■□□□□ 0.92
NPC1-207ENST00000588867 ADAMTSL3P82987 1691 aa20.82■□□□□ 0.92
NPC1-207ENST00000588867 RIMS1Q86UR5 1692 aaKnown RBP20.82■□□□□ 0.92
NPC1-207ENST00000588867 KIF1BO60333 1816 aa20.82■□□□□ 0.92
NPC1-207ENST00000588867 C3P01024 1663 aa20.81■□□□□ 0.92
NPC1-207ENST00000588867 DCAF11Q8TEB1 546 aa20.81■□□□□ 0.92
NPC1-207ENST00000588867 KDM2AQ9Y2K7 1162 aa20.81■□□□□ 0.92
NPC1-207ENST00000588867 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
NPC1-207ENST00000588867 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
NPC1-207ENST00000588867 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
NPC1-207ENST00000588867 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
NPC1-207ENST00000588867 TNRQ92752 1358 aa20.77■□□□□ 0.92
NPC1-207ENST00000588867 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
NPC1-207ENST00000588867 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
NPC1-207ENST00000588867 NEURL4Q96JN8 1562 aa20.71■□□□□ 0.91
NPC1-207ENST00000588867 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
NPC1-207ENST00000588867 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
NPC1-207ENST00000588867 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
NPC1-207ENST00000588867 PTPRMP28827 1452 aa20.68■□□□□ 0.9
NPC1-207ENST00000588867 RPGRIP1LQ68CZ1 1315 aa20.67■□□□□ 0.9
NPC1-207ENST00000588867 NUTM2DQ5VT03 806 aaPredicted RBP20.66■□□□□ 0.9
NPC1-207ENST00000588867 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
NPC1-207ENST00000588867 NLRP1Q9C000 1473 aa20.65■□□□□ 0.9
NPC1-207ENST00000588867 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
NPC1-207ENST00000588867 UHRF1BP1Q6BDS2 1440 aa20.64■□□□□ 0.89
NPC1-207ENST00000588867 A2ML1A8K2U0 1454 aa20.64■□□□□ 0.89
NPC1-207ENST00000588867 PRAG1Q86YV5 1406 aa20.62■□□□□ 0.89
NPC1-207ENST00000588867 PPLO60437 1756 aa20.62■□□□□ 0.89
NPC1-207ENST00000588867 ADGRF5Q8IZF2 1346 aa20.62■□□□□ 0.89
NPC1-207ENST00000588867 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
NPC1-207ENST00000588867 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms