RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
CACTIN-206ENST00000588749 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
CACTIN-206ENST00000588749 KDM5DQ9BY66 1539 aa22.4■■□□□ 1.18
CACTIN-206ENST00000588749 NPATQ14207 1427 aa22.4■■□□□ 1.18
CACTIN-206ENST00000588749 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.18
CACTIN-206ENST00000588749 FAM135AQ9P2D6 1515 aa22.38■■□□□ 1.17
CACTIN-206ENST00000588749 RRP7BPQ9NSQ0 103 aa22.36■■□□□ 1.17
CACTIN-206ENST00000588749 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
CACTIN-206ENST00000588749 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
CACTIN-206ENST00000588749 WASHC2CQ9Y4E1 1318 aa22.35■■□□□ 1.17
CACTIN-206ENST00000588749 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
CACTIN-206ENST00000588749 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
CACTIN-206ENST00000588749 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
CACTIN-206ENST00000588749 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
CACTIN-206ENST00000588749 ABCC3O15438 1527 aa22.31■■□□□ 1.16
CACTIN-206ENST00000588749 ZC3H13Q5T200 1668 aaKnown RBP22.3■■□□□ 1.16
CACTIN-206ENST00000588749 NCOA1Q15788 1441 aa22.3■■□□□ 1.16
CACTIN-206ENST00000588749 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
CACTIN-206ENST00000588749 PZPP20742 1482 aa22.29■■□□□ 1.16
CACTIN-206ENST00000588749 CEP152O94986 1710 aa22.28■■□□□ 1.16
CACTIN-206ENST00000588749 ZNF142P52746 1687 aaPredicted RBP22.27■■□□□ 1.16
CACTIN-206ENST00000588749 PRDM15P57071 1507 aaPredicted RBP22.26■■□□□ 1.15
CACTIN-206ENST00000588749 STRCQ7RTU9 1775 aa22.26■■□□□ 1.15
CACTIN-206ENST00000588749 FBXO31Q5XUX0 539 aaPredicted RBP22.26■■□□□ 1.15
CACTIN-206ENST00000588749 CEP170BQ9Y4F5 1589 aaPredicted RBP22.25■■□□□ 1.15
CACTIN-206ENST00000588749 DEPDC5O75140 1603 aa22.24■■□□□ 1.15
CACTIN-206ENST00000588749 CAMSAP1Q5T5Y3 1602 aa22.24■■□□□ 1.15
CACTIN-206ENST00000588749 TNRQ92752 1358 aa22.24■■□□□ 1.15
CACTIN-206ENST00000588749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
CACTIN-206ENST00000588749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
CACTIN-206ENST00000588749 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
CACTIN-206ENST00000588749 A2ML1A8K2U0 1454 aa22.19■■□□□ 1.14
CACTIN-206ENST00000588749 KANK1Q14678 1352 aa22.18■■□□□ 1.14
CACTIN-206ENST00000588749 ITGAEP38570 1179 aa22.18■■□□□ 1.14
CACTIN-206ENST00000588749 CFAP65Q6ZU64 1925 aaKnown RBP22.18■■□□□ 1.14
CACTIN-206ENST00000588749 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
CACTIN-206ENST00000588749 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
CACTIN-206ENST00000588749 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
CACTIN-206ENST00000588749 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
CACTIN-206ENST00000588749 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
CACTIN-206ENST00000588749 VWDEQ8N2E2 1590 aa22.14■■□□□ 1.13
CACTIN-206ENST00000588749 PLA2R1Q13018 1463 aa22.14■■□□□ 1.13
CACTIN-206ENST00000588749 NLRP1Q9C000 1473 aa22.14■■□□□ 1.13
CACTIN-206ENST00000588749 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
CACTIN-206ENST00000588749 LMTK2Q8IWU2 1503 aa22.12■■□□□ 1.13
CACTIN-206ENST00000588749 PTPRTO14522 1441 aa22.12■■□□□ 1.13
CACTIN-206ENST00000588749 NCKAP5LQ9HCH0 1330 aa22.1■■□□□ 1.13
CACTIN-206ENST00000588749 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.13
CACTIN-206ENST00000588749 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.13
CACTIN-206ENST00000588749 UNC13BO14795 1591 aa22.08■■□□□ 1.12
CACTIN-206ENST00000588749 PKD2Q13563 968 aa22.06■■□□□ 1.12
CACTIN-206ENST00000588749 ILDR1Q86SU0 546 aaPredicted RBP22.05■■□□□ 1.12
CACTIN-206ENST00000588749 POLR1AO95602 1720 aaPredicted RBP22.05■■□□□ 1.12
CACTIN-206ENST00000588749 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
CACTIN-206ENST00000588749 TET3O43151 1660 aa22.02■■□□□ 1.12
CACTIN-206ENST00000588749 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
CACTIN-206ENST00000588749 GCC2Q8IWJ2 1684 aa22■■□□□ 1.11
CACTIN-206ENST00000588749 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
CACTIN-206ENST00000588749 SYNMO15061 1565 aa21.99■■□□□ 1.11
CACTIN-206ENST00000588749 IQGAP3Q86VI3 1631 aa21.98■■□□□ 1.11
CACTIN-206ENST00000588749 CERKQ8TCT0 537 aa21.98■■□□□ 1.11
CACTIN-206ENST00000588749 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
CACTIN-206ENST00000588749 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
CACTIN-206ENST00000588749 ANKLE2Q86XL3 938 aa21.97■■□□□ 1.11
CACTIN-206ENST00000588749 NOS1P29475 1434 aa21.97■■□□□ 1.11
CACTIN-206ENST00000588749 NUP155O75694 1391 aa21.96■■□□□ 1.11
CACTIN-206ENST00000588749 FBXO41Q8TF61 875 aa21.95■■□□□ 1.1
CACTIN-206ENST00000588749 NAIPQ13075 1403 aa21.94■■□□□ 1.1
CACTIN-206ENST00000588749 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
CACTIN-206ENST00000588749 E9PCH4 1651 aa21.93■■□□□ 1.1
CACTIN-206ENST00000588749 ZNF335Q9H4Z2 1342 aaPredicted RBP21.92■■□□□ 1.1
CACTIN-206ENST00000588749 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
CACTIN-206ENST00000588749 IDI1Q13907 227 aa21.91■■□□□ 1.1
CACTIN-206ENST00000588749 STAG3Q9UJ98 1225 aa21.91■■□□□ 1.1
CACTIN-206ENST00000588749 MED14O60244 1454 aa21.9■■□□□ 1.1
CACTIN-206ENST00000588749 KDM5AP29375 1690 aaKnown RBP21.9■■□□□ 1.1
CACTIN-206ENST00000588749 SLIT1O75093 1534 aa21.9■■□□□ 1.1
CACTIN-206ENST00000588749 ARHGAP23Q9P227 1491 aa21.9■■□□□ 1.1
CACTIN-206ENST00000588749 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
CACTIN-206ENST00000588749 IQGAP1P46940 1657 aa21.89■■□□□ 1.1
CACTIN-206ENST00000588749 ADGRB3O60242 1522 aa21.89■■□□□ 1.09
CACTIN-206ENST00000588749 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
CACTIN-206ENST00000588749 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
CACTIN-206ENST00000588749 TMEM2Q9UHN6 1383 aa21.86■■□□□ 1.09
CACTIN-206ENST00000588749 LTKP29376 864 aa21.84■■□□□ 1.09
CACTIN-206ENST00000588749 TXNDC2Q86VQ3 553 aa21.84■■□□□ 1.09
CACTIN-206ENST00000588749 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
CACTIN-206ENST00000588749 MYO5BQ9ULV0 1848 aa21.82■■□□□ 1.08
CACTIN-206ENST00000588749 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
CACTIN-206ENST00000588749 TMEM131LA2VDJ0 1609 aa21.8■■□□□ 1.08
CACTIN-206ENST00000588749 SPHKAPQ2M3C7 1700 aa21.79■■□□□ 1.08
CACTIN-206ENST00000588749 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CACTIN-206ENST00000588749 CPS1P31327 1500 aa21.77■■□□□ 1.08
CACTIN-206ENST00000588749 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
CACTIN-206ENST00000588749 ZFYVE9O95405 1425 aa21.73■■□□□ 1.07
CACTIN-206ENST00000588749 STRCP1A6NGW2 1772 aa21.73■■□□□ 1.07
CACTIN-206ENST00000588749 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
CACTIN-206ENST00000588749 TRPM2O94759 1503 aa21.7■■□□□ 1.07
CACTIN-206ENST00000588749 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
CACTIN-206ENST00000588749 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms