RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 RNF17Q9BXT8 1623 aaKnown RBP28.18■■■□□ 2.1
HDAC5-209ENST00000588703 SHANK2Q9UPX8 1470 aa28.18■■■□□ 2.1
HDAC5-209ENST00000588703 MYO3AQ8NEV4 1616 aa28.18■■■□□ 2.1
HDAC5-209ENST00000588703 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
HDAC5-209ENST00000588703 ZNF142P52746 1687 aaPredicted RBP28.16■■■□□ 2.1
HDAC5-209ENST00000588703 ILDR1Q86SU0 546 aaPredicted RBP28.15■■■□□ 2.1
HDAC5-209ENST00000588703 DAPK1P53355 1430 aa28.14■■■□□ 2.1
HDAC5-209ENST00000588703 DUOX2Q9NRD8 1548 aa28.12■■■□□ 2.09
HDAC5-209ENST00000588703 MROH1Q8NDA8 1641 aa28.11■■■□□ 2.09
HDAC5-209ENST00000588703 PZPP20742 1482 aa28.08■■■□□ 2.09
HDAC5-209ENST00000588703 CEP170BQ9Y4F5 1589 aaPredicted RBP28.08■■■□□ 2.09
HDAC5-209ENST00000588703 ZC3H13Q5T200 1668 aaKnown RBP28.07■■■□□ 2.08
HDAC5-209ENST00000588703 KIF15Q9NS87 1388 aa28.07■■■□□ 2.08
HDAC5-209ENST00000588703 NCOA1Q15788 1441 aa28.07■■■□□ 2.08
HDAC5-209ENST00000588703 CAMSAP1Q5T5Y3 1602 aa28.07■■■□□ 2.08
HDAC5-209ENST00000588703 WASHC2CQ9Y4E1 1318 aa28.06■■■□□ 2.08
HDAC5-209ENST00000588703 ABCC3O15438 1527 aa28.06■■■□□ 2.08
HDAC5-209ENST00000588703 CEP152O94986 1710 aa28.04■■■□□ 2.08
HDAC5-209ENST00000588703 ERBINQ96RT1 1412 aa28.01■■■□□ 2.08
HDAC5-209ENST00000588703 FBXO31Q5XUX0 539 aaPredicted RBP28.01■■■□□ 2.07
HDAC5-209ENST00000588703 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
HDAC5-209ENST00000588703 PTPRTO14522 1441 aa28■■■□□ 2.07
HDAC5-209ENST00000588703 PRDM15P57071 1507 aaPredicted RBP27.99■■■□□ 2.07
HDAC5-209ENST00000588703 DMRT2Q9Y5R5 561 aa27.99■■■□□ 2.07
HDAC5-209ENST00000588703 A2ML1A8K2U0 1454 aa27.99■■■□□ 2.07
HDAC5-209ENST00000588703 TNRQ92752 1358 aa27.99■■■□□ 2.07
HDAC5-209ENST00000588703 DEPDC5O75140 1603 aa27.98■■■□□ 2.07
HDAC5-209ENST00000588703 ADGRL2O95490 1459 aa27.96■■■□□ 2.07
HDAC5-209ENST00000588703 PLA2R1Q13018 1463 aa27.96■■■□□ 2.07
HDAC5-209ENST00000588703 CHIC2Q9UKJ5 165 aa27.96■■■□□ 2.07
HDAC5-209ENST00000588703 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
HDAC5-209ENST00000588703 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
HDAC5-209ENST00000588703 CFAP65Q6ZU64 1925 aaKnown RBP27.93■■■□□ 2.06
HDAC5-209ENST00000588703 SPATA31D1Q6ZQQ2 1576 aa27.93■■■□□ 2.06
HDAC5-209ENST00000588703 FBXO41Q8TF61 875 aa27.92■■■□□ 2.06
HDAC5-209ENST00000588703 NCKAP5LQ9HCH0 1330 aa27.9■■■□□ 2.06
HDAC5-209ENST00000588703 ERVK-7P63135 1459 aa27.89■■■□□ 2.06
HDAC5-209ENST00000588703 NLRP1Q9C000 1473 aa27.88■■■□□ 2.05
HDAC5-209ENST00000588703 CERKQ8TCT0 537 aa27.87■■■□□ 2.05
HDAC5-209ENST00000588703 POLR1AO95602 1720 aaPredicted RBP27.87■■■□□ 2.05
HDAC5-209ENST00000588703 VWDEQ8N2E2 1590 aa27.86■■■□□ 2.05
HDAC5-209ENST00000588703 PPARGC1BQ86YN6 1023 aaKnown RBP27.85■■■□□ 2.05
HDAC5-209ENST00000588703 PKD2Q13563 968 aa27.84■■■□□ 2.05
HDAC5-209ENST00000588703 LTBP4Q8N2S1 1624 aa27.83■■■□□ 2.05
HDAC5-209ENST00000588703 ARHGAP31Q2M1Z3 1444 aa27.83■■■□□ 2.05
HDAC5-209ENST00000588703 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
HDAC5-209ENST00000588703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.81■■■□□ 2.04
HDAC5-209ENST00000588703 LMTK2Q8IWU2 1503 aa27.81■■■□□ 2.04
HDAC5-209ENST00000588703 NEURL4Q96JN8 1562 aa27.81■■■□□ 2.04
HDAC5-209ENST00000588703 KANK1Q14678 1352 aa27.78■■■□□ 2.04
HDAC5-209ENST00000588703 ANKRD50Q9ULJ7 1429 aa27.77■■■□□ 2.04
HDAC5-209ENST00000588703 UBR1Q8IWV7 1749 aa27.76■■■□□ 2.03
HDAC5-209ENST00000588703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.035e-6■■■□□ 14.8
HDAC5-209ENST00000588703 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
HDAC5-209ENST00000588703 ROCK1Q13464 1354 aa27.73■■■□□ 2.03
HDAC5-209ENST00000588703 THEMISQ8N1K5 641 aaPredicted RBP27.72■■■□□ 2.03
HDAC5-209ENST00000588703 UNC13BO14795 1591 aa27.71■■■□□ 2.03
HDAC5-209ENST00000588703 ZNF335Q9H4Z2 1342 aaPredicted RBP27.7■■■□□ 2.03
HDAC5-209ENST00000588703 PIK3C2BO00750 1634 aa27.68■■■□□ 2.02
HDAC5-209ENST00000588703 SYNMO15061 1565 aa27.68■■■□□ 2.02
HDAC5-209ENST00000588703 TET3O43151 1660 aa27.66■■■□□ 2.02
HDAC5-209ENST00000588703 MED14O60244 1454 aa27.66■■■□□ 2.02
HDAC5-209ENST00000588703 ANKLE2Q86XL3 938 aa27.66■■■□□ 2.02
HDAC5-209ENST00000588703 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
HDAC5-209ENST00000588703 IQGAP1P46940 1657 aa27.65■■■□□ 2.02
HDAC5-209ENST00000588703 IQSEC2Q5JU85 1478 aa27.64■■■□□ 2.02
HDAC5-209ENST00000588703 GCC2Q8IWJ2 1684 aa27.64■■■□□ 2.02
HDAC5-209ENST00000588703 ITGAEP38570 1179 aa27.63■■■□□ 2.01
HDAC5-209ENST00000588703 NPHP4O75161 1426 aaPredicted RBP27.63■■■□□ 2.01
HDAC5-209ENST00000588703 NOS1P29475 1434 aa27.63■■■□□ 2.01
HDAC5-209ENST00000588703 KDM5AP29375 1690 aaKnown RBP27.62■■■□□ 2.01
HDAC5-209ENST00000588703 ARHGAP23Q9P227 1491 aa27.61■■■□□ 2.01
HDAC5-209ENST00000588703 SLIT1O75093 1534 aa27.61■■■□□ 2.01
HDAC5-209ENST00000588703 RPRD2Q5VT52 1461 aaKnown RBP27.59■■■□□ 2.01
HDAC5-209ENST00000588703 IQGAP3Q86VI3 1631 aa27.59■■■□□ 2.01
HDAC5-209ENST00000588703 E9PCH4 1651 aa27.56■■■□□ 2
HDAC5-209ENST00000588703 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
HDAC5-209ENST00000588703 IDI1Q13907 227 aa27.54■■■□□ 2
HDAC5-209ENST00000588703 ADGRB3O60242 1522 aa27.53■■■□□ 2
HDAC5-209ENST00000588703 LTKP29376 864 aa27.52■■■□□ 2
HDAC5-209ENST00000588703 STRCP1A6NGW2 1772 aa27.51■■□□□ 1.99
HDAC5-209ENST00000588703 CPS1P31327 1500 aa27.51■■□□□ 1.99
HDAC5-209ENST00000588703 MYO5BQ9ULV0 1848 aa27.51■■□□□ 1.99
HDAC5-209ENST00000588703 TMEM2Q9UHN6 1383 aa27.5■■□□□ 1.99
HDAC5-209ENST00000588703 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
HDAC5-209ENST00000588703 NUP155O75694 1391 aa27.47■■□□□ 1.99
HDAC5-209ENST00000588703 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
HDAC5-209ENST00000588703 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
HDAC5-209ENST00000588703 NAIPQ13075 1403 aa27.43■■□□□ 1.98
HDAC5-209ENST00000588703 TMEM131LA2VDJ0 1609 aa27.43■■□□□ 1.98
HDAC5-209ENST00000588703 EID1Q9Y6B2 187 aa27.42■■□□□ 1.98
HDAC5-209ENST00000588703 UBAP1LF5GYI3 381 aa27.37■■□□□ 1.97
HDAC5-209ENST00000588703 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
HDAC5-209ENST00000588703 ZFYVE9O95405 1425 aa27.36■■□□□ 1.97
HDAC5-209ENST00000588703 LRRC7Q96NW7 1537 aa27.35■■□□□ 1.97
HDAC5-209ENST00000588703 HFM1A2PYH4 1435 aa27.34■■□□□ 1.97
HDAC5-209ENST00000588703 ALKQ9UM73 1620 aa27.31■■□□□ 1.96
HDAC5-209ENST00000588703 XIRP1Q702N8 1843 aaKnown RBP27.31■■□□□ 1.96
HDAC5-209ENST00000588703 RIMS2Q9UQ26 1411 aa27.3■■□□□ 1.96
HDAC5-209ENST00000588703 CHGAP10645 457 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms