RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 RNF17Q9BXT8 1623 aaKnown RBP26.48■■□□□ 1.83
RFX1-203ENST00000588520 KDM5DQ9BY66 1539 aa26.48■■□□□ 1.83
RFX1-203ENST00000588520 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
RFX1-203ENST00000588520 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
RFX1-203ENST00000588520 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
RFX1-203ENST00000588520 FAM50AQ14320 339 aaKnown RBP26.45■■□□□ 1.82
RFX1-203ENST00000588520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.45■■□□□ 1.82
RFX1-203ENST00000588520 ADGRL2O95490 1459 aa26.44■■□□□ 1.82
RFX1-203ENST00000588520 WASHC2CQ9Y4E1 1318 aa26.41■■□□□ 1.82
RFX1-203ENST00000588520 NCOA1Q15788 1441 aa26.41■■□□□ 1.82
RFX1-203ENST00000588520 ZC3H13Q5T200 1668 aaKnown RBP26.41■■□□□ 1.82
RFX1-203ENST00000588520 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
RFX1-203ENST00000588520 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.82
RFX1-203ENST00000588520 PZPP20742 1482 aa26.36■■□□□ 1.81
RFX1-203ENST00000588520 MROH1Q8NDA8 1641 aa26.35■■□□□ 1.81
RFX1-203ENST00000588520 PRDM15P57071 1507 aaPredicted RBP26.34■■□□□ 1.81
RFX1-203ENST00000588520 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
RFX1-203ENST00000588520 ABCC3O15438 1527 aa26.34■■□□□ 1.81
RFX1-203ENST00000588520 HSPA2P54652 639 aa26.33■■□□□ 1.81
RFX1-203ENST00000588520 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
RFX1-203ENST00000588520 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
RFX1-203ENST00000588520 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
RFX1-203ENST00000588520 MYO3AQ8NEV4 1616 aa26.29■■□□□ 1.8
RFX1-203ENST00000588520 ZNF142P52746 1687 aaPredicted RBP26.28■■□□□ 1.8
RFX1-203ENST00000588520 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
RFX1-203ENST00000588520 KANK1Q14678 1352 aa26.28■■□□□ 1.8
RFX1-203ENST00000588520 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
RFX1-203ENST00000588520 TNRQ92752 1358 aa26.25■■□□□ 1.79
RFX1-203ENST00000588520 CEP170BQ9Y4F5 1589 aaPredicted RBP26.24■■□□□ 1.79
RFX1-203ENST00000588520 ARHGAP31Q2M1Z3 1444 aa26.24■■□□□ 1.79
RFX1-203ENST00000588520 DMRT2Q9Y5R5 561 aa26.24■■□□□ 1.79
RFX1-203ENST00000588520 CAMSAP1Q5T5Y3 1602 aa26.23■■□□□ 1.79
RFX1-203ENST00000588520 LMTK2Q8IWU2 1503 aa26.23■■□□□ 1.79
RFX1-203ENST00000588520 A2ML1A8K2U0 1454 aa26.22■■□□□ 1.79
RFX1-203ENST00000588520 NLRP1Q9C000 1473 aa26.22■■□□□ 1.79
RFX1-203ENST00000588520 SPATA31D1Q6ZQQ2 1576 aa26.21■■□□□ 1.79
RFX1-203ENST00000588520 VWDEQ8N2E2 1590 aa26.21■■□□□ 1.79
RFX1-203ENST00000588520 CEP152O94986 1710 aa26.21■■□□□ 1.79
RFX1-203ENST00000588520 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
RFX1-203ENST00000588520 FBXO31Q5XUX0 539 aaPredicted RBP26.19■■□□□ 1.78
RFX1-203ENST00000588520 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
RFX1-203ENST00000588520 STRCQ7RTU9 1775 aa26.17■■□□□ 1.78
RFX1-203ENST00000588520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.16■■□□□ 1.78
RFX1-203ENST00000588520 PTPRTO14522 1441 aa26.14■■□□□ 1.78
RFX1-203ENST00000588520 PKD2Q13563 968 aa26.12■■□□□ 1.77
RFX1-203ENST00000588520 UNC13BO14795 1591 aa26.12■■□□□ 1.77
RFX1-203ENST00000588520 ITGAEP38570 1179 aa26.11■■□□□ 1.77
RFX1-203ENST00000588520 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
RFX1-203ENST00000588520 RPRD2Q5VT52 1461 aaKnown RBP26.09■■□□□ 1.77
RFX1-203ENST00000588520 THEMISQ8N1K5 641 aaPredicted RBP26.08■■□□□ 1.77
RFX1-203ENST00000588520 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
RFX1-203ENST00000588520 TET3O43151 1660 aa26.04■■□□□ 1.76
RFX1-203ENST00000588520 NOS1P29475 1434 aa26.01■■□□□ 1.75
RFX1-203ENST00000588520 IQGAP3Q86VI3 1631 aa26.01■■□□□ 1.75
RFX1-203ENST00000588520 GCC2Q8IWJ2 1684 aa26■■□□□ 1.75
RFX1-203ENST00000588520 CFAP65Q6ZU64 1925 aaKnown RBP25.98■■□□□ 1.75
RFX1-203ENST00000588520 HFM1A2PYH4 1435 aa25.98■■□□□ 1.75
RFX1-203ENST00000588520 NAIPQ13075 1403 aa25.98■■□□□ 1.75
RFX1-203ENST00000588520 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
RFX1-203ENST00000588520 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
RFX1-203ENST00000588520 ANKLE2Q86XL3 938 aa25.97■■□□□ 1.75
RFX1-203ENST00000588520 POLR1AO95602 1720 aaPredicted RBP25.97■■□□□ 1.75
RFX1-203ENST00000588520 NUP155O75694 1391 aa25.96■■□□□ 1.75
RFX1-203ENST00000588520 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
RFX1-203ENST00000588520 UBR1Q8IWV7 1749 aa25.95■■□□□ 1.74
RFX1-203ENST00000588520 SYNMO15061 1565 aa25.93■■□□□ 1.74
RFX1-203ENST00000588520 MED14O60244 1454 aa25.92■■□□□ 1.74
RFX1-203ENST00000588520 SLIT1O75093 1534 aa25.91■■□□□ 1.74
RFX1-203ENST00000588520 NEURL4Q96JN8 1562 aa25.9■■□□□ 1.74
RFX1-203ENST00000588520 PIK3C2BO00750 1634 aa25.9■■□□□ 1.74
RFX1-203ENST00000588520 ARHGAP23Q9P227 1491 aa25.9■■□□□ 1.74
RFX1-203ENST00000588520 E9PCH4 1651 aa25.88■■□□□ 1.73
RFX1-203ENST00000588520 IDI1Q13907 227 aa25.88■■□□□ 1.73
RFX1-203ENST00000588520 CERKQ8TCT0 537 aa25.88■■□□□ 1.73
RFX1-203ENST00000588520 STAG3Q9UJ98 1225 aa25.87■■□□□ 1.73
RFX1-203ENST00000588520 ADGRB3O60242 1522 aa25.85■■□□□ 1.73
RFX1-203ENST00000588520 FBXO41Q8TF61 875 aa25.85■■□□□ 1.73
RFX1-203ENST00000588520 NPHP4O75161 1426 aaPredicted RBP25.85■■□□□ 1.73
RFX1-203ENST00000588520 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
RFX1-203ENST00000588520 SCAF11Q99590 1463 aaKnown RBP25.85■■□□□ 1.73
RFX1-203ENST00000588520 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
RFX1-203ENST00000588520 TMEM2Q9UHN6 1383 aa25.84■■□□□ 1.73
RFX1-203ENST00000588520 EID1Q9Y6B2 187 aa25.83■■□□□ 1.73
RFX1-203ENST00000588520 IQSEC2Q5JU85 1478 aa25.83■■□□□ 1.73
RFX1-203ENST00000588520 IQGAP1P46940 1657 aa25.81■■□□□ 1.72
RFX1-203ENST00000588520 ILDR1Q86SU0 546 aaPredicted RBP25.8■■□□□ 1.72
RFX1-203ENST00000588520 TXNDC2Q86VQ3 553 aa25.78■■□□□ 1.72
RFX1-203ENST00000588520 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
RFX1-203ENST00000588520 CPS1P31327 1500 aa25.74■■□□□ 1.71
RFX1-203ENST00000588520 LTKP29376 864 aa25.74■■□□□ 1.71
RFX1-203ENST00000588520 HDGFP51858 240 aaKnown RBP25.74■■□□□ 1.71
RFX1-203ENST00000588520 SPHKAPQ2M3C7 1700 aa25.74■■□□□ 1.71
RFX1-203ENST00000588520 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
RFX1-203ENST00000588520 TRIM52Q96A61 297 aa25.73■■□□□ 1.71
RFX1-203ENST00000588520 TRPM2O94759 1503 aa25.69■■□□□ 1.7
RFX1-203ENST00000588520 ZFYVE9O95405 1425 aa25.69■■□□□ 1.7
RFX1-203ENST00000588520 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
RFX1-203ENST00000588520 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
RFX1-203ENST00000588520 SETD5Q9C0A6 1442 aa25.66■■□□□ 1.7
RFX1-203ENST00000588520 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms