RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
TPM4-210ENST00000588507 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
TPM4-210ENST00000588507 ABCC1P33527 1531 aa12.3□□□□□ -0.44
TPM4-210ENST00000588507 PHLPP1O60346 1717 aa12.29□□□□□ -0.44
TPM4-210ENST00000588507 XIRP1Q702N8 1843 aaKnown RBP12.28□□□□□ -0.44
TPM4-210ENST00000588507 KDM5DQ9BY66 1539 aa12.27□□□□□ -0.44
TPM4-210ENST00000588507 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
TPM4-210ENST00000588507 AFF2P51816 1311 aa12.27□□□□□ -0.45
TPM4-210ENST00000588507 TNRQ92752 1358 aa12.27□□□□□ -0.45
TPM4-210ENST00000588507 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
TPM4-210ENST00000588507 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
TPM4-210ENST00000588507 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
TPM4-210ENST00000588507 GGT6Q6P531 493 aa12.26□□□□□ -0.45
TPM4-210ENST00000588507 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
TPM4-210ENST00000588507 ITSN2Q9NZM3 1697 aa12.25□□□□□ -0.45
TPM4-210ENST00000588507 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
TPM4-210ENST00000588507 KIDINS220Q9ULH0 1771 aa12.23□□□□□ -0.45
TPM4-210ENST00000588507 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
TPM4-210ENST00000588507 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
TPM4-210ENST00000588507 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
TPM4-210ENST00000588507 TMEM94Q12767 1356 aa12.21□□□□□ -0.45
TPM4-210ENST00000588507 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
TPM4-210ENST00000588507 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
TPM4-210ENST00000588507 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
TPM4-210ENST00000588507 NHSL1Q5SYE7 1610 aa12.18□□□□□ -0.46
TPM4-210ENST00000588507 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
TPM4-210ENST00000588507 HRCP23327 699 aa12.17□□□□□ -0.46
TPM4-210ENST00000588507 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
TPM4-210ENST00000588507 ZC3H13Q5T200 1668 aaKnown RBP12.16□□□□□ -0.46
TPM4-210ENST00000588507 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
TPM4-210ENST00000588507 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
TPM4-210ENST00000588507 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
TPM4-210ENST00000588507 C1QTNF8P60827 252 aa12.15□□□□□ -0.46
TPM4-210ENST00000588507 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
TPM4-210ENST00000588507 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
TPM4-210ENST00000588507 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
TPM4-210ENST00000588507 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
TPM4-210ENST00000588507 MSH6P52701 1360 aa12.13□□□□□ -0.47
TPM4-210ENST00000588507 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
TPM4-210ENST00000588507 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
TPM4-210ENST00000588507 A2MP01023 1474 aa12.12□□□□□ -0.47
TPM4-210ENST00000588507 PZPP20742 1482 aa12.11□□□□□ -0.47
TPM4-210ENST00000588507 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
TPM4-210ENST00000588507 DEFB132Q7Z7B7 95 aa12.11□□□□□ -0.47
TPM4-210ENST00000588507 KIF14Q15058 1648 aa12.11□□□□□ -0.47
TPM4-210ENST00000588507 KCNA6P17658 529 aa12.1□□□□□ -0.47
TPM4-210ENST00000588507 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
TPM4-210ENST00000588507 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
TPM4-210ENST00000588507 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
TPM4-210ENST00000588507 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
TPM4-210ENST00000588507 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
TPM4-210ENST00000588507 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.47
TPM4-210ENST00000588507 SF3B2Q13435 895 aaKnown RBP12.07□□□□□ -0.48
TPM4-210ENST00000588507 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
TPM4-210ENST00000588507 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
TPM4-210ENST00000588507 SLC34A2O95436 690 aa12.06□□□□□ -0.48
TPM4-210ENST00000588507 LTKP29376 864 aa12.06□□□□□ -0.48
TPM4-210ENST00000588507 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
TPM4-210ENST00000588507 BCL9LQ86UU0 1499 aa12.06□□□□□ -0.48
TPM4-210ENST00000588507 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
TPM4-210ENST00000588507 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
TPM4-210ENST00000588507 ABCC3O15438 1527 aa12.05□□□□□ -0.48
TPM4-210ENST00000588507 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
TPM4-210ENST00000588507 TIAM1Q13009 1591 aa12.04□□□□□ -0.48
TPM4-210ENST00000588507 EP400Q96L91 3159 aa12.04□□□□□ -0.48
TPM4-210ENST00000588507 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
TPM4-210ENST00000588507 DIP2AQ14689 1571 aa12.02□□□□□ -0.49
TPM4-210ENST00000588507 USP21Q9UK80 565 aa12.02□□□□□ -0.49
TPM4-210ENST00000588507 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
TPM4-210ENST00000588507 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
TPM4-210ENST00000588507 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
TPM4-210ENST00000588507 CLIP1P30622 1438 aa12.01□□□□□ -0.49
TPM4-210ENST00000588507 TROQ12816 1431 aaPredicted RBP12.01□□□□□ -0.49
TPM4-210ENST00000588507 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
TPM4-210ENST00000588507 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
TPM4-210ENST00000588507 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
TPM4-210ENST00000588507 PREX2Q70Z35 1606 aa11.98□□□□□ -0.49
TPM4-210ENST00000588507 NKTRP30414 1462 aaKnown RBP11.98□□□□□ -0.49
TPM4-210ENST00000588507 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
TPM4-210ENST00000588507 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
TPM4-210ENST00000588507 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
TPM4-210ENST00000588507 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
TPM4-210ENST00000588507 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
TPM4-210ENST00000588507 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
TPM4-210ENST00000588507 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
TPM4-210ENST00000588507 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
TPM4-210ENST00000588507 KDM5AP29375 1690 aaKnown RBP11.96□□□□□ -0.5
TPM4-210ENST00000588507 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.5
TPM4-210ENST00000588507 SLIT1O75093 1534 aa11.96□□□□□ -0.5
TPM4-210ENST00000588507 ATRNO75882 1429 aa11.95□□□□□ -0.5
TPM4-210ENST00000588507 KIF3BO15066 747 aa11.95□□□□□ -0.5
TPM4-210ENST00000588507 CADPS2Q86UW7 1296 aa11.95□□□□□ -0.5
TPM4-210ENST00000588507 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
TPM4-210ENST00000588507 SLC26A8Q96RN1 970 aa11.94□□□□□ -0.5
TPM4-210ENST00000588507 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
TPM4-210ENST00000588507 SYCP2Q9BX26 1530 aa11.93□□□□□ -0.5
TPM4-210ENST00000588507 BAG6P46379 1132 aa11.93□□□□□ -0.5
TPM4-210ENST00000588507 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
TPM4-210ENST00000588507 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
TPM4-210ENST00000588507 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms