RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
TUBD1-208ENST00000588009 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
TUBD1-208ENST00000588009 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
TUBD1-208ENST00000588009 FECHP22830 423 aa10.5□□□□□ -0.73
TUBD1-208ENST00000588009 DDRGK1Q96HY6 314 aa10.5□□□□□ -0.73
TUBD1-208ENST00000588009 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
TUBD1-208ENST00000588009 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
TUBD1-208ENST00000588009 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
TUBD1-208ENST00000588009 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
TUBD1-208ENST00000588009 HS3ST6Q96QI5 342 aa10.49□□□□□ -0.73
TUBD1-208ENST00000588009 EVI5O60447 810 aa10.48□□□□□ -0.73
TUBD1-208ENST00000588009 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
TUBD1-208ENST00000588009 SPNS2Q8IVW8 549 aa10.46□□□□□ -0.73
TUBD1-208ENST00000588009 PTGDRQ13258 359 aa10.45□□□□□ -0.74
TUBD1-208ENST00000588009 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
TUBD1-208ENST00000588009 ERBB3P21860 1342 aa10.43□□□□□ -0.74
TUBD1-208ENST00000588009 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
TUBD1-208ENST00000588009 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
TUBD1-208ENST00000588009 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
TUBD1-208ENST00000588009 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
TUBD1-208ENST00000588009 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
TUBD1-208ENST00000588009 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
TUBD1-208ENST00000588009 SLC34A2O95436 690 aa10.37□□□□□ -0.75
TUBD1-208ENST00000588009 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
TUBD1-208ENST00000588009 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
TUBD1-208ENST00000588009 FLIIQ13045 1269 aa10.36□□□□□ -0.75
TUBD1-208ENST00000588009 EPAS1Q99814 870 aa10.36□□□□□ -0.75
TUBD1-208ENST00000588009 KRTAP3-3Q9BYR6 98 aa10.36□□□□□ -0.75
TUBD1-208ENST00000588009 KRTAP3-2Q9BYR7 98 aa10.36□□□□□ -0.75
TUBD1-208ENST00000588009 NPDC1Q9NQX5 325 aaPredicted RBP10.36□□□□□ -0.75
TUBD1-208ENST00000588009 PHF14O94880 888 aa10.35□□□□□ -0.75
TUBD1-208ENST00000588009 MS4A1P11836 297 aa10.35□□□□□ -0.75
TUBD1-208ENST00000588009 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
TUBD1-208ENST00000588009 REPIN1Q9BWE0 567 aaKnown RBP10.35□□□□□ -0.75
TUBD1-208ENST00000588009 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
TUBD1-208ENST00000588009 CDHR5Q9HBB8 845 aa10.34□□□□□ -0.75
TUBD1-208ENST00000588009 MAP3K7O43318 606 aa10.32□□□□□ -0.76
TUBD1-208ENST00000588009 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
TUBD1-208ENST00000588009 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
TUBD1-208ENST00000588009 TMUB1Q9BVT8 246 aa10.32□□□□□ -0.76
TUBD1-208ENST00000588009 CLCN1P35523 988 aa10.3□□□□□ -0.76
TUBD1-208ENST00000588009 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
TUBD1-208ENST00000588009 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
TUBD1-208ENST00000588009 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
TUBD1-208ENST00000588009 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
TUBD1-208ENST00000588009 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
TUBD1-208ENST00000588009 ARSIQ5FYB1 569 aa10.28□□□□□ -0.76
TUBD1-208ENST00000588009 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
TUBD1-208ENST00000588009 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
TUBD1-208ENST00000588009 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
TUBD1-208ENST00000588009 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
TUBD1-208ENST00000588009 PHOX2BQ99453 314 aa10.27□□□□□ -0.77
TUBD1-208ENST00000588009 GPCPD1Q9NPB8 672 aa10.27□□□□□ -0.77
TUBD1-208ENST00000588009 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
TUBD1-208ENST00000588009 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
TUBD1-208ENST00000588009 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
TUBD1-208ENST00000588009 FBXW7Q969H0 707 aa10.24□□□□□ -0.77
TUBD1-208ENST00000588009 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
TUBD1-208ENST00000588009 KDM4FA0A1W2PPD8 638 aa10.22□□□□□ -0.77
TUBD1-208ENST00000588009 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
TUBD1-208ENST00000588009 A6NJR5 290 aa10.21□□□□□ -0.77
TUBD1-208ENST00000588009 ARID3CA6NKF2 412 aa10.21□□□□□ -0.77
TUBD1-208ENST00000588009 APBB1O00213 710 aa10.21□□□□□ -0.77
TUBD1-208ENST00000588009 OATP04181 439 aa10.21□□□□□ -0.77
TUBD1-208ENST00000588009 ARID3AQ99856 593 aa10.21□□□□□ -0.77
TUBD1-208ENST00000588009 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
TUBD1-208ENST00000588009 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
TUBD1-208ENST00000588009 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
TUBD1-208ENST00000588009 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
TUBD1-208ENST00000588009 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
TUBD1-208ENST00000588009 FOSBP53539 338 aa10.19□□□□□ -0.78
TUBD1-208ENST00000588009 PSDA5PKW4 1024 aaPredicted RBP10.18□□□□□ -0.78
TUBD1-208ENST00000588009 C6orf132Q5T0Z8 1188 aa10.18□□□□□ -0.78
TUBD1-208ENST00000588009 PADI6Q6TGC4 694 aa10.18□□□□□ -0.78
TUBD1-208ENST00000588009 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
TUBD1-208ENST00000588009 PBX2P40425 430 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 MCM6Q14566 821 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
TUBD1-208ENST00000588009 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 NLRP7Q8WX94 980 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 ADGRG1Q9Y653 693 aa10.17□□□□□ -0.78
TUBD1-208ENST00000588009 TRAK2O60296 914 aa10.16□□□□□ -0.78
TUBD1-208ENST00000588009 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
TUBD1-208ENST00000588009 NUDT7P0C024 238 aa10.15□□□□□ -0.78
TUBD1-208ENST00000588009 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
TUBD1-208ENST00000588009 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.781e-7■■■■□ 24
TUBD1-208ENST00000588009 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
TUBD1-208ENST00000588009 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
TUBD1-208ENST00000588009 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
TUBD1-208ENST00000588009 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
TUBD1-208ENST00000588009 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
TUBD1-208ENST00000588009 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
TUBD1-208ENST00000588009 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
TUBD1-208ENST00000588009 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
TUBD1-208ENST00000588009 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
TUBD1-208ENST00000588009 PRSS12P56730 875 aa10.1□□□□□ -0.79
TUBD1-208ENST00000588009 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
TUBD1-208ENST00000588009 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
TUBD1-208ENST00000588009 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms